BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913355|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_D01.
         (544 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P13368|7LESS_DROME Protein sevenless OS=Drosophila melanogast...    31   3.4  
sp|Q3TDD9|KLRAQ_MOUSE KLRAQ motif-containing protein 1 OS=Mus mu...    30   7.6  
sp|P35521|ICLN_CANFA Methylosome subunit pICln OS=Canis familiar...    30   7.6  
sp|Q9ZKC0|TRUA_HELPJ tRNA pseudouridine synthase A OS=Helicobact...    30   9.9  
sp|Q74ZJ8|SEC16_ASHGO COPII coat assembly protein SEC16 OS=Ashby...    30   9.9  
sp|Q6C6S3|RFT1_YARLI Oligosaccharide translocation protein RFT1 ...    30   9.9  
sp|Q04753|ICLN_RAT Methylosome subunit pICln OS=Rattus norvegicu...    30   9.9  
sp|Q61189|ICLN_MOUSE Methylosome subunit pICln OS=Mus musculus G...    30   9.9  

>sp|P13368|7LESS_DROME Protein sevenless OS=Drosophila melanogaster
           GN=sev PE=1 SV=2
          Length = 2554

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 183 FHCQ*TQIHHL---TQPHLKRPHPQ*PNNQFLPAAVEWCLHFPLFY*L*NP*NV 31
           +H Q   I HL   TQP L+R  P+  + Q  P  + W +HFP  Y    P N+
Sbjct: 298 WHLQRLAISHLVERTQPQLERA-PR-ADGQSTPLTIRWAMHFPEHYLASRPFNI 349


>sp|Q3TDD9|KLRAQ_MOUSE KLRAQ motif-containing protein 1 OS=Mus
           musculus GN=Klraq1 PE=2 SV=1
          Length = 780

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = -2

Query: 441 SEQCWLS*KKTSQELGIELRTKLPYGLLYFYAVQ*ADILMNNPQHYQGITMQITPRI*TV 262
           S +C L  KK +      LRT L   + Y  AV    +L+++ +  +G+  Q+   +  +
Sbjct: 513 SAECMLQYKKKAAAYMKSLRTPLAESVPYGEAVANRRVLLSSTESREGLAQQVQQSLEKI 572

Query: 261 PTLEHHKD 238
             LE  K+
Sbjct: 573 SKLEQEKE 580


>sp|P35521|ICLN_CANFA Methylosome subunit pICln OS=Canis familiaris
           GN=CLNS1A PE=1 SV=1
          Length = 235

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 114 VTEDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 224
           V E+E S D+VE   EF F  S++ A     T  C+C
Sbjct: 94  VAEEEDSDDDVEPIAEFRFVPSDKSALEAMFTAMCEC 130


>sp|Q9ZKC0|TRUA_HELPJ tRNA pseudouridine synthase A OS=Helicobacter
           pylori J99 GN=truA PE=3 SV=1
          Length = 242

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -3

Query: 134 RGLILSNQTINFYRPQ-WNGAYIFHY 60
           +G+  +NQ ++F+ P+ WN A +FHY
Sbjct: 52  KGVHANNQALSFHAPKHWNAAKLFHY 77


>sp|Q74ZJ8|SEC16_ASHGO COPII coat assembly protein SEC16 OS=Ashbya
            gossypii GN=SEC16 PE=3 SV=1
          Length = 2272

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
 Frame = -3

Query: 320  ITPNIIKE*PCR*HQ-EYKQYPLLN---ITKILYSLALTTSSNAFSFSFPFTVS 171
            + P  I+E P   H   ++Q+PL N    +KI+Y L+L   +  +    PF VS
Sbjct: 1011 VLPPTIQEVPVDGHALNFRQFPLFNWSQTSKIVYGLSLPIDTGNYMLGKPFPVS 1064


>sp|Q6C6S3|RFT1_YARLI Oligosaccharide translocation protein RFT1
           OS=Yarrowia lipolytica GN=RFT1 PE=3 SV=1
          Length = 673

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -3

Query: 134 RGLILSNQTINFYRPQWNGAYIFHYFTSFKTHRT*PRPIL 15
           RGL+ +N      R  W+  +I+HY+ S K     P  +L
Sbjct: 549 RGLVFANIVNMTLRIGWSVVFIYHYYVSHKAENVNPTHLL 588


>sp|Q04753|ICLN_RAT Methylosome subunit pICln OS=Rattus norvegicus
           GN=Clns1a PE=2 SV=1
          Length = 236

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 120 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 224
           EDE  +D+VE   EF F  S++ A     T  C+C
Sbjct: 97  EDEDDNDDVEPISEFRFVPSDKSALEAMFTAMCEC 131


>sp|Q61189|ICLN_MOUSE Methylosome subunit pICln OS=Mus musculus
           GN=Clns1a PE=1 SV=1
          Length = 236

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 120 EDEASSDEVESGDEFVFTDSEREAEGKSIT*SCQC 224
           EDE  +D++E   EF F  S++ A     T  C+C
Sbjct: 97  EDEEDNDDIEPISEFRFVPSDKSALEAMFTAMCEC 131

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913355|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_D01.
         (544 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******