BP913356
Clone id YMU001_000029_D02
Library
Length 513
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_D02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATTCGCGGCCGCGAATTGAGAATTAGATGTTATTTCCTCTGTGGAACCTGGGACCAGGTA
TTGGTTGCACTGGAAGGTGTGTTTTATGCAAGCATCCTATGAAGGCTTCTTCACTCTTCA
GCCAGTGTGTTGTGCCTCGATTTCAAGTGGGTCTTGAACAACACAATTCAGGCTCTGTGA
TGATAACCACGTGTGAATTGTTAGCAGAATTGGTGGTATAAACTCCAGTACAGAGGGTCA
CAACCAGATGGAATTGGAGAGTTAGAGAATTGTGATGGTCTACATACACTTCCTCGTGCA
AATTACGATTCAAAAAGTCTGTCTTTTTCCCAATTGAGGGTTGAAAGTGGATGAACATGG
GCATTATGGCCCATTCAGAATTAGATGAAGCAGACAGCTTTTAGCCCTAGCCTGCTCGGG
AAAAGTAAGCAGTGTTCGCTCTTATCGCAGATAAATTCTGCTTGTATAATTGTGAAAAGC
TGGAGAAGCTTTTGTCAACATGTATCCTGTATG
■■Homology search results ■■ -
sp_hit_id P46581
Definition sp|P46581|YLB7_CAEEL Uncharacterized bHLH domain-containing protein C34E10.7 OS=Caenorhabditis elegans
Align length 32
Score (bit) 32.3
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913356|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_D02.
(496 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P46581|YLB7_CAEEL Uncharacterized bHLH domain-containing prot... 32 1.2
sp|Q0SVK9|SPED_CLOPS S-adenosylmethionine decarboxylase proenzym... 32 1.6
sp|Q8XMZ0|SPED_CLOPE S-adenosylmethionine decarboxylase proenzym... 32 1.6
sp|Q0TTQ9|SPED_CLOP1 S-adenosylmethionine decarboxylase proenzym... 32 1.6

>sp|P46581|YLB7_CAEEL Uncharacterized bHLH domain-containing protein
C34E10.7 OS=Caenorhabditis elegans GN=C34E10.7 PE=2 SV=1
Length = 192

Score = 32.3 bits (72), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2

Query: 261 PSQFSNSPIPSGCDPLYWSLYHQFC*QFTRGY 166
P+Q S +P+ CDP Y +YHQ Q T Y
Sbjct: 159 PTQPSAAPLQGSCDPQYQQMYHQHSHQNTFNY 190


>sp|Q0SVK9|SPED_CLOPS S-adenosylmethionine decarboxylase proenzyme
OS=Clostridium perfringens (strain SM101 / Type A)
GN=speD PE=3 SV=1
Length = 271

Score = 32.0 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3

Query: 170 VIITEPELCCSR--PT*NRGTTHWLKSEEAFIGCLHKTHLPVQPIPGPRFHRGNNI 9
V+ITE L + P+ N+G +L+ ++ +G L K+HL V P FH N+I
Sbjct: 84 VLITEEALPVALIDPSCNKGELSYLELRDSVVGHLDKSHLTVHTY--PEFHPNNDI 137


>sp|Q8XMZ0|SPED_CLOPE S-adenosylmethionine decarboxylase proenzyme
OS=Clostridium perfringens GN=speD PE=3 SV=1
Length = 271

Score = 32.0 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3

Query: 170 VIITEPELCCSR--PT*NRGTTHWLKSEEAFIGCLHKTHLPVQPIPGPRFHRGNNI 9
V+ITE L + P+ N+G +L+ ++ +G L K+HL V P FH N+I
Sbjct: 84 VLITEEALPVALIDPSCNKGELSYLELRDSVVGHLDKSHLTVHTY--PEFHPNNDI 137


>sp|Q0TTQ9|SPED_CLOP1 S-adenosylmethionine decarboxylase proenzyme
OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=speD PE=3 SV=1
Length = 271

Score = 32.0 bits (71), Expect = 1.6
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -3

Query: 170 VIITEPELCCSR--PT*NRGTTHWLKSEEAFIGCLHKTHLPVQPIPGPRFHRGNNI 9
V+ITE L + P+ N+G +L+ ++ +G L K+HL V P FH N+I
Sbjct: 84 VLITEEALPVALIDPSCNKGELSYLELRDSVVGHLDKSHLTVHTY--PEFHPNNDI 137


tr_hit_id A7JRJ0
Definition tr|A7JRJ0|A7JRJ0_PASHA Possible sulfur oxidation protein DsrH OS=Mannheimia haemolytica PHL213
Align length 57
Score (bit) 35.0
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913356|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_D02.
(496 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7JRJ0|A7JRJ0_PASHA Possible sulfur oxidation protein DsrH OS... 35 2.0
tr|A5AZJ5|A5AZJ5_VITVI Putative uncharacterized protein OS=Vitis... 34 4.3
tr|A5BS07|A5BS07_VITVI Putative uncharacterized protein OS=Vitis... 33 5.6
tr|Q9M5C6|Q9M5C6_IPOBA Reverse transcriptase-like protein (Fragm... 33 7.3
tr|A5C752|A5C752_VITVI Putative uncharacterized protein OS=Vitis... 33 7.3
tr|B4VZ94|B4VZ94_9CYAN Methyltransferase, putative OS=Microcoleu... 33 7.5
tr|B0G258|B0G258_9FIRM Putative uncharacterized protein OS=Dorea... 33 9.5
tr|A5AIG7|A5AIG7_VITVI Putative uncharacterized protein OS=Vitis... 33 9.5

>tr|A7JRJ0|A7JRJ0_PASHA Possible sulfur oxidation protein DsrH
OS=Mannheimia haemolytica PHL213 GN=dsrH PE=4 SV=1
Length = 91

Score = 35.0 bits (79), Expect = 2.0
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2

Query: 263 LHTLPRANYDSKSLSFSQLRVESG*TWALWPIQN*MKQTAFSPSLLGKSKQCSLLSQ 433
L+TL +ANYD ++L+F + LW Q+ + Q SP K +C LL+Q
Sbjct: 2 LYTLSKANYDEETLNFFFSHLSENDAVVLW--QDGVLQAVKSPQFFAKLPRCYLLAQ 56


>tr|A5AZJ5|A5AZJ5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_009543 PE=4 SV=1
Length = 495

Score = 33.9 bits (76), Expect = 4.3
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Frame = -3

Query: 350 IMPMFIHFQPSIGK---KTDFLNRNLHEEVYVDHHNSL--TLQFHLVVTLCTGVYTTNSA 186
+M + HF + + KT FLN +LHEEVY+D + H+V L +Y
Sbjct: 322 VMALVTHFDLELHQMDIKTAFLNGDLHEEVYMDQXEGFQDKXKEHMVYKLXKXIYDLKQT 381

Query: 185 NNS-----HVVIIT 159
+ H ++IT
Sbjct: 382 SKQWYLKFHEILIT 395


>tr|A5BS07|A5BS07_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_036423 PE=4 SV=1
Length = 815

Score = 33.5 bits (75), Expect = 5.6
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -3

Query: 350 IMPMFIHFQPSIGK---KTDFLNRNLHEEVYVDHHNSLTLQ 237
IM + HF + + KT FLNR+L E+VY+D H +++
Sbjct: 490 IMALVAHFDLELYQMDVKTAFLNRSLEEKVYMDQHEGFSIK 530


>tr|Q9M5C6|Q9M5C6_IPOBA Reverse transcriptase-like protein
(Fragment) OS=Ipomoea batatas PE=4 SV=1
Length = 94

Score = 33.1 bits (74), Expect = 7.3
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3

Query: 308 KTDFLNRNLHEEVYVDHHNSLTLQ--FHLVVTLCTGVYTTNSAN 183
KT FLN NL EE+Y++ H +++ H+V L +Y A+
Sbjct: 5 KTAFLNGNLEEEIYMNQHEGFSVEGKEHMVCKLNRSIYGLRQAS 48


>tr|A5C752|A5C752_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_008704 PE=4 SV=1
Length = 162

Score = 33.1 bits (74), Expect = 7.3
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -3

Query: 350 IMPMFIHFQPSIGK---KTDFLNRNLHEEVYVDHHNSL--TLQFHLVVTLCTGVYTTNSA 186
+M + HF + K KT FLN +LHEEVY+D + H+V L +Y A
Sbjct: 78 VMALVAHFDLELHKMDVKTAFLNGDLHEEVYMDQPEGFQDKGKEHMVCKLKKSIYGLKQA 137

Query: 185 N 183
+
Sbjct: 138 S 138


>tr|B4VZ94|B4VZ94_9CYAN Methyltransferase, putative OS=Microcoleus
chthonoplastes PCC 7420 GN=MC7420_4973 PE=4 SV=1
Length = 257

Score = 33.1 bits (74), Expect = 7.5
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2

Query: 477 QKLLQLFTIIQAEFICDKSEHC 412
QKL+Q+ I Q EFICDK+E+C
Sbjct: 115 QKLVQIKQIHQIEFICDKAENC 136


>tr|B0G258|B0G258_9FIRM Putative uncharacterized protein OS=Dorea
formicigenerans ATCC 27755 GN=DORFOR_00312 PE=4 SV=1
Length = 373

Score = 32.7 bits (73), Expect = 9.5
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3

Query: 327 KVDEHGHYGPFRIR*SRQLLALACSGKVSSVRS 425
KV E+ H G F + S ++LA ACSGK S+RS
Sbjct: 27 KVYEYTHAGIFFVSESGEILAYACSGKDQSMRS 59


>tr|A5AIG7|A5AIG7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039839 PE=4 SV=1
Length = 1154

Score = 32.7 bits (73), Expect = 9.5
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -3

Query: 350 IMPMFIHFQPSIGK---KTDFLNRNLHEEVYVD 261
+M + HF + K KT FLN +LHEEVY+D
Sbjct: 453 VMALVAHFDLELHKMDVKTTFLNGDLHEEVYMD 485