BP913360 |
Clone id |
YMU001_000029_D06 |
Library |
YMU01 |
Length |
508 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_D06. |
Accession |
BP913360 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCAAAATGGCTTAGTATACGGCCTGGCCTCCATGGTCCCACCTTGGTGTTTTTCGTATGG ACTAGAGAAGAGGCCATGGTATCACAAAACTCTGCACAGAATAATCTCAACTGGCTTACT CTACTTTCATCGTGTTCAAACTTTAAACCTGAAGCTGTCATCTGTTTATGGGCCATCCCT CCACTGTGCCTGTATTTGCTGTCAGAGTACAATCTGCAGTCTGTCGAGGAATCAAAAGAG GTTGACGGAGGCGTGTTTGTGGAAGAATATACTCGTCGTCACTGTCATAATATGCCAAGC CAGAAGAAGGCATTGCCGCCCTGGTGCAAAATGCAAGAAGCAAAGCAAAAACCTCGATGA TCACTAGTGCTAGGCCCGCCCACTTGCAAAATTCCAAGTTAGTTTCCACAAATTCTTTGA TATAATCAAATAGACCACTTGGATCATCAGGGATAATCTCCTCCCATTTCTCATTAAGAA AAAGTTTTGCTACAAAAGCTCCTTCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XSW2 |
Definition |
sp|Q9XSW2|ESR2_PIG Estrogen receptor beta OS=Sus scrofa |
Align length |
61 |
Score (bit) |
34.3 |
E-value |
0.35 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TB01 |
Definition |
tr|A9TB01|A9TB01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
104 |
Score (bit) |
85.9 |
E-value |
1.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913360|Adiantum capillus-veneris mRNA, clone: YMU001_000029_D06. (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TB01|A9TB01_PHYPA Predicted protein OS=Physcomitrella paten... 86 1e-15 tr|A9NN42|A9NN42_PICSI Putative uncharacterized protein OS=Picea... 85 2e-15 tr|A9NYQ6|A9NYQ6_PICSI Putative uncharacterized protein OS=Picea... 84 4e-15 tr|Q7XKE1|Q7XKE1_ORYSJ Os04g0679900 protein OS=Oryza sativa subs... 82 1e-14 tr|B8ARH1|B8ARH1_ORYSI Putative uncharacterized protein OS=Oryza... 82 1e-14 tr|A7PWY4|A7PWY4_VITVI Chromosome chr12 scaffold_36, whole genom... 81 3e-14 tr|Q9SKU3|Q9SKU3_ARATH Putative uncharacterized protein At2g2074... 79 2e-13 tr|Q940P5|Q940P5_ARATH At2g20740/F5H14.29 (Putative uncharacteri... 79 2e-13 tr|Q3E7P8|Q3E7P8_ARATH Uncharacterized protein At2g20740.2 OS=Ar... 79 2e-13 tr|Q259E3|Q259E3_ORYSA H0801D08.19 protein (B0213E10.2 protein) ... 79 2e-13 tr|B6UEQ4|B6UEQ4_MAIZE Putative uncharacterized protein OS=Zea m... 79 2e-13 tr|A3AYP4|A3AYP4_ORYSJ Putative uncharacterized protein OS=Oryza... 79 2e-13 tr|A9S7P3|A9S7P3_PHYPA Predicted protein OS=Physcomitrella paten... 77 6e-13 tr|Q5Z407|Q5Z407_ORYSJ Os06g0731400 protein OS=Oryza sativa subs... 75 1e-12 tr|Q5Z406|Q5Z406_ORYSJ cDNA clone:J013033B05, full insert sequen... 75 1e-12 tr|B8B2Y0|B8B2Y0_ORYSI Putative uncharacterized protein OS=Oryza... 75 1e-12 tr|A3BFN6|A3BFN6_ORYSJ Putative uncharacterized protein OS=Oryza... 75 1e-12 tr|A9TB04|A9TB04_PHYPA Predicted protein (Fragment) OS=Physcomit... 75 2e-12 tr|A7R6M3|A7R6M3_VITVI Chromosome undetermined scaffold_1336, wh... 75 2e-12 tr|A7QYM9|A7QYM9_VITVI Chromosome undetermined scaffold_252, who... 75 2e-12 tr|Q9C5W7|Q9C5W7_ARATH Putative uncharacterized protein At1g3240... 73 7e-12 tr|Q9SK78|Q9SK78_ARATH Putative uncharacterized protein At2g2023... 73 9e-12 tr|Q93XY5|Q93XY5_ARATH Putative uncharacterized protein At2g2023... 73 9e-12 tr|B4FD22|B4FD22_MAIZE Putative uncharacterized protein OS=Zea m... 73 9e-12 tr|Q9SVU4|Q9SVU4_ARATH Putative uncharacterized protein F16A16.1... 72 1e-11 tr|Q9LQL8|Q9LQL8_ARATH F5D14.17 protein OS=Arabidopsis thaliana ... 72 2e-11 tr|A9PB07|A9PB07_POPTR Putative uncharacterized protein OS=Popul... 70 5e-11 tr|A9PAK5|A9PAK5_POPTR Putative uncharacterized protein OS=Popul... 70 5e-11 tr|A9P8P8|A9P8P8_POPTR Putative uncharacterized protein OS=Popul... 70 5e-11 tr|A5BPR6|A5BPR6_VITVI Putative uncharacterized protein OS=Vitis... 70 5e-11
>tr|A9TB01|A9TB01_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193263 PE=4 SV=1 Length = 297
Score = 85.9 bits (211), Expect = 1e-15 Identities = 45/104 (43%), Positives = 61/104 (58%) Frame = -1
Query: 499 AFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAFCTR 320 A LF + W E IP+DP+G D I+ FV NL+ CKW L +VI+EV L AF R Sbjct: 142 AVAGALFFDRHWREDIPEDPTGELDKIQNFVLDNLDICKWVSLGVVILEVLGLFFAFILR 201
Query: 319 AAMPSSGLAYYDSDDEYILPQTRLRQPLLIPRQTADCTLTANTG 188 A+ S+ YYDSDD+Y+ P++ R+P + RQ L A +G Sbjct: 202 -AISSNARRYYDSDDDYMAPRSAPRRP-VADRQANQPPLAAGSG 243
>tr|A9NN42|A9NN42_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 282
Score = 84.7 bits (208), Expect = 2e-15 Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 1/109 (0%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 +E A +F + KWE++IP D +G FD IK+F+E +++ +W L +VI++VFA++LA Sbjct: 125 VELALAGFIFFDHKWEKVIPTDKTGYFDDIKDFLEKHVKIVRWVALGIVILQVFAVILAL 184
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQ-TRLRQPLLIPRQTADCTLTANTGT 185 +AA + G YDSDDEYI + T +RQP LI RQ A + G+ Sbjct: 185 VVKAA--NRGPEEYDSDDEYIAARSTSVRQP-LINRQGAQVAAVSTPGS 230
>tr|A9NYQ6|A9NYQ6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 196
Score = 84.0 bits (206), Expect = 4e-15 Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 1/109 (0%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 +E A +F + KWE++IP D +G FD IK+F+E +++ +W L +VI++VFA++LA Sbjct: 39 VELALAGFIFFDHKWEKVIPTDKTGYFDDIKDFLEKHVKIVRWVALGIVILQVFAVILAL 98
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQ-TRLRQPLLIPRQTADCTLTANTGT 185 +AA + G YDSDDEY+ + T +RQP LI RQ A + G+ Sbjct: 99 VVKAA--NRGPEEYDSDDEYLTTRATSVRQP-LINRQGAQVAAVSTPGS 144
>tr|Q7XKE1|Q7XKE1_ORYSJ Os04g0679900 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0017I01.13 PE=2 SV=1 Length = 217
Score = 82.0 bits (201), Expect = 1e-14 Identities = 41/92 (44%), Positives = 55/92 (59%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 LEGA +FLN WEE PDDPSG F+ K+F+ +N E C+W GL++V +V +++L Sbjct: 98 LEGAITTDVFLNSNWEEDFPDDPSGKFEEFKDFIRSNFEICEWIGLSVVAAQVLSIVLGM 157
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQTRLRQPLL 233 RA P + YDSDD+ P R PLL Sbjct: 158 VLRALGPDRE-SDYDSDDD---PSVPARLPLL 185
>tr|B8ARH1|B8ARH1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17943 PE=4 SV=1 Length = 217
Score = 82.0 bits (201), Expect = 1e-14 Identities = 41/92 (44%), Positives = 55/92 (59%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 LEGA +FLN WEE PDDPSG F+ K+F+ +N E C+W GL++V +V +++L Sbjct: 98 LEGAITTDVFLNSNWEEDFPDDPSGKFEEFKDFIRSNFEICEWIGLSVVAAQVLSIVLGM 157
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQTRLRQPLL 233 RA P + YDSDD+ P R PLL Sbjct: 158 VLRALGPDRE-SDYDSDDD---PSVPARLPLL 185
>tr|A7PWY4|A7PWY4_VITVI Chromosome chr12 scaffold_36, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025828001 PE=4 SV=1 Length = 243
Score = 80.9 bits (198), Expect = 3e-14 Identities = 41/92 (44%), Positives = 53/92 (57%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 LE A +FLN WEE P+DP+G F K FV +N E CKW GL+++ ++ ++LLA Sbjct: 95 LEAGVTADVFLNHDWEEDFPEDPTGSFHEFKNFVRSNFEICKWIGLSILFVQGLSILLAM 154
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQTRLRQPLL 233 +A P YYDSDDEY R PLL Sbjct: 155 VLKALGPHQ---YYDSDDEY----APTRAPLL 179
>tr|Q9SKU3|Q9SKU3_ARATH Putative uncharacterized protein At2g20740 OS=Arabidopsis thaliana GN=At2g20740 PE=4 SV=1 Length = 123
Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/89 (40%), Positives = 55/89 (61%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 +EG VA +FLN W++ P+DPSG F +F+E+N + CKW GL++V ++ ++L+A Sbjct: 2 VEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAM 61
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQTRLRQ 242 +A P +YDSDDEY + L Q Sbjct: 62 LLKALGPHPH-RHYDSDDEYNVSTVALLQ 89
>tr|Q940P5|Q940P5_ARATH At2g20740/F5H14.29 (Putative uncharacterized protein At2g20740) OS=Arabidopsis thaliana GN=At2g20740 PE=2 SV=1 Length = 221
Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/89 (40%), Positives = 55/89 (61%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 +EG VA +FLN W++ P+DPSG F +F+E+N + CKW GL++V ++ ++L+A Sbjct: 100 VEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAM 159
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQTRLRQ 242 +A P +YDSDDEY + L Q Sbjct: 160 LLKALGPHPH-RHYDSDDEYNVSTVALLQ 187
>tr|Q3E7P8|Q3E7P8_ARATH Uncharacterized protein At2g20740.2 OS=Arabidopsis thaliana GN=At2g20740 PE=4 SV=1 Length = 180
Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/89 (40%), Positives = 55/89 (61%) Frame = -1
Query: 508 LEGAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAF 329 +EG VA +FLN W++ P+DPSG F +F+E+N + CKW GL++V ++ ++L+A Sbjct: 59 VEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAM 118
Query: 328 CTRAAMPSSGLAYYDSDDEYILPQTRLRQ 242 +A P +YDSDDEY + L Q Sbjct: 119 LLKALGPHPH-RHYDSDDEYNVSTVALLQ 146
>tr|Q259E3|Q259E3_ORYSA H0801D08.19 protein (B0213E10.2 protein) OS=Oryza sativa GN=H0801D08.19 PE=4 SV=1 Length = 190
Score = 78.6 bits (192), Expect = 2e-13 Identities = 39/90 (43%), Positives = 53/90 (58%) Frame = -1
Query: 502 GAFVAKLFLNEKWEEIIPDDPSGLFDYIKEFVETNLEFCKWAGLALVIIEVFALLLAFCT 323 GA +FLN WEE PDDPSG F+ K+F+ +N E C+W GL++V +V +++L Sbjct: 73 GAITTDVFLNSNWEEDFPDDPSGKFEEFKDFIRSNFEICEWIGLSVVAAQVLSIVLGMVL 132
Query: 322 RAAMPSSGLAYYDSDDEYILPQTRLRQPLL 233 RA P + YDSDD+ P R PLL Sbjct: 133 RALGPDRE-SDYDSDDD---PSVPARLPLL 158
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