BP913366 |
Clone id |
YMU001_000029_D12 |
Library |
YMU01 |
Length |
523 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_D12. |
Accession |
BP913366 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3662Contig1 |
Sequence |
CGAAGAGATGAGGTCAGTCAAGCTTCTCCCAAGTCGTAGAAGCAGGTATGAGAGGTCGCA GTATGCACTAGCCTTTGAGACCGCAGAGAATCATGGAGGAGATCAAGCATAGAAGCGCAA AGGGTTAGCTATGCTAACATGAACTCGGCAGAAGAAGTTGGATGGAGGCAGAGTACTGGC ATAGAGGCAATAAGCCCTGATTACACAAGTGTCCACAGGGCAAGGTCTGAAGCTCTGTCT GTGCAATCGGACCCTGCAAAAGTGGGTGGAATGAGGCAGCAATTTACAGAGCTTATCGAC CTTGTAAAAAAACCAGAGATTTGTTTTCCAATGTCATGGTTTATGGCCTCATATGCTATG ATACCCACATTAGCAGGAACTATGTTTTTCTCTCAAACCCAGCATTTGAAAATAGACCCT TCCGTAGTAGGCATGGCAAAAGTAATGGGGCAAGTGGGTCTGATGGGAGGGAGTGCATTG TATAGCAGATACTTGGAGGGCATGCCATTGAGGAAGCTGTTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8G7I0 |
Definition |
sp|Q8G7I0|RNPH_BIFLO Ribonuclease PH OS=Bifidobacterium longum |
Align length |
45 |
Score (bit) |
32.0 |
E-value |
1.8 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PAZ5 |
Definition |
tr|A7PAZ5|A7PAZ5_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
97 |
Score (bit) |
102.0 |
E-value |
9.0e-21 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913366|Adiantum capillus-veneris mRNA, clone: YMU001_000029_D12. (523 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PAZ5|A7PAZ5_VITVI Chromosome chr16 scaffold_10, whole genom... 102 9e-21 tr|A5AG57|A5AG57_VITVI Putative uncharacterized protein OS=Vitis... 102 9e-21 tr|A9RTS1|A9RTS1_PHYPA Predicted protein (Fragment) OS=Physcomit... 100 6e-20 tr|Q6ZF24|Q6ZF24_ORYSJ Os07g0425000 protein OS=Oryza sativa subs... 92 1e-17 tr|B8BDZ7|B8BDZ7_ORYSI Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|A9THA6|A9THA6_PHYPA Predicted protein OS=Physcomitrella paten... 92 1e-17 tr|A3BJ43|A3BJ43_ORYSJ Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|Q9XIQ7|Q9XIQ7_ARATH F13O11.19 protein (Putative uncharacteriz... 92 2e-17 tr|Q94AI3|Q94AI3_ARATH Putative uncharacterized protein At1g6489... 92 2e-17 tr|B6TYM7|B6TYM7_MAIZE Folate/biopterin transporter family prote... 92 2e-17 tr|Q8GZ34|Q8GZ34_ARATH Putative uncharacterized protein At1g6489... 91 3e-17 tr|B4FI43|B4FI43_MAIZE Putative uncharacterized protein OS=Zea m... 84 6e-15 tr|A9RP20|A9RP20_PHYPA Predicted protein OS=Physcomitrella paten... 83 7e-15 tr|A7NXL3|A7NXL3_VITVI Chromosome chr5 scaffold_2, whole genome ... 83 7e-15 tr|B6TI36|B6TI36_MAIZE Transporter, folate-biopterin transporter... 83 1e-14 tr|A5B4P7|A5B4P7_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|Q6I5Y4|Q6I5Y4_ORYSJ Os05g0389400 protein OS=Oryza sativa subs... 81 4e-14 tr|O22780|O22780_ARATH Putative uncharacterized protein At2g3328... 79 2e-13 tr|Q8GYA1|Q8GYA1_ARATH Putative uncharacterized protein At1g0457... 77 4e-13 tr|O23028|O23028_ARATH T1G11.18 protein OS=Arabidopsis thaliana ... 77 4e-13 tr|Q9FFU4|Q9FFU4_ARATH Similarity to integral membrane protein O... 71 3e-11 tr|Q8RWQ5|Q8RWQ5_ARATH AT5g54860/MBG8_12 OS=Arabidopsis thaliana... 71 3e-11 tr|B4FJL6|B4FJL6_MAIZE Putative uncharacterized protein OS=Zea m... 65 2e-09 tr|A7P0T7|A7P0T7_VITVI Chromosome chr19 scaffold_4, whole genome... 65 3e-09 tr|Q0JP52|Q0JP52_ORYSJ cDNA clone:J033122L17, full insert sequen... 64 5e-09 tr|A2ZR72|A2ZR72_ORYSJ Putative uncharacterized protein OS=Oryza... 64 5e-09 tr|A2WMQ6|A2WMQ6_ORYSI Putative uncharacterized protein OS=Oryza... 64 5e-09 tr|A9T467|A9T467_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06 tr|Q015W3|Q015W3_OSTTA Homology to unknown gene (Fragment) OS=Os... 53 1e-05 tr|B7G533|B7G533_PHATR Predicted protein OS=Phaeodactylum tricor... 50 5e-05
>tr|A7PAZ5|A7PAZ5_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013884001 PE=4 SV=1 Length = 440
Score = 102 bits (255), Expect = 9e-21 Identities = 50/97 (51%), Positives = 72/97 (74%) Frame = +1
Query: 232 ALSVQSDPAKVGGMRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQHLK 411 +L + P+ VG +R+Q +EL +KKPEI + +SWF ASYA+IP L GTMFF QTQ+LK Sbjct: 210 SLHLPKSPSNVG-IRKQLSELTFALKKPEIAYSISWFAASYAIIPALTGTMFFYQTQYLK 268
Query: 412 IDPSVVGMAKVMGQVGLMGGSALYSRYLEGMPLRKLL 522 ID SV+G++KV GQ ++ S +Y++YL+ +P RKL+ Sbjct: 269 IDSSVLGISKVFGQAAMLLWSIIYNQYLKSVPPRKLI 305
>tr|A5AG57|A5AG57_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024388 PE=4 SV=1 Length = 440
Score = 102 bits (255), Expect = 9e-21 Identities = 50/97 (51%), Positives = 72/97 (74%) Frame = +1
Query: 232 ALSVQSDPAKVGGMRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQHLK 411 +L + P+ VG +R+Q +EL +KKPEI + +SWF ASYA+IP L GTMFF QTQ+LK Sbjct: 210 SLHLPKSPSNVG-IRKQLSELTFALKKPEIAYSISWFAASYAIIPALTGTMFFYQTQYLK 268
Query: 412 IDPSVVGMAKVMGQVGLMGGSALYSRYLEGMPLRKLL 522 ID SV+G++KV GQ ++ S +Y++YL+ +P RKL+ Sbjct: 269 IDSSVLGISKVFGQAAMLLWSIIYNQYLKSVPPRKLI 305
>tr|A9RTS1|A9RTS1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_43845 PE=4 SV=1 Length = 422
Score = 100 bits (248), Expect = 6e-20 Identities = 52/108 (48%), Positives = 76/108 (70%), Gaps = 3/108 (2%) Frame = +1
Query: 205 TSVHRARSEALSV-QSDPAKVG--GMRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLA 375 T+ + A E L++ Q+D K M+ Q + L D++KKP + P+ WF++SYA+IP L Sbjct: 185 TTTNVAHVECLNLSQTDGNKPQTLSMQGQLSLLSDVLKKPAVLGPLLWFLSSYAVIPNLG 244
Query: 376 GTMFFSQTQHLKIDPSVVGMAKVMGQVGLMGGSALYSRYLEGMPLRKL 519 +MFF QTQHL +D SV+G+ KV+GQ GL+GGS LY+R L+ +P+RKL Sbjct: 245 SSMFFYQTQHLGLDSSVIGLVKVVGQAGLLGGSILYNRSLKKVPIRKL 292
>tr|Q6ZF24|Q6ZF24_ORYSJ Os07g0425000 protein OS=Oryza sativa subsp. japonica GN=P0409D09.18 PE=4 SV=1 Length = 264
Score = 92.4 bits (228), Expect = 1e-17 Identities = 39/84 (46%), Positives = 66/84 (78%) Frame = +1
Query: 271 MRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQHLKIDPSVVGMAKVMG 450 +R+QF+ L + + +I +P+ W M S+A++P L+GTMF QTQ+LK+DPSV+G++KV+G Sbjct: 43 LRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVG 102
Query: 451 QVGLMGGSALYSRYLEGMPLRKLL 522 QV ++ + LY++YL+ +PLR+L+ Sbjct: 103 QVMVLSLTVLYNKYLKKIPLRRLV 126
>tr|B8BDZ7|B8BDZ7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30755 PE=4 SV=1 Length = 516
Score = 92.4 bits (228), Expect = 1e-17 Identities = 39/84 (46%), Positives = 66/84 (78%) Frame = +1
Query: 271 MRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQHLKIDPSVVGMAKVMG 450 +R+QF+ L + + +I +P+ W M S+A++P L+GTMF QTQ+LK+DPSV+G++KV+G Sbjct: 295 LRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVG 354
Query: 451 QVGLMGGSALYSRYLEGMPLRKLL 522 QV ++ + LY++YL+ +PLR+L+ Sbjct: 355 QVMVLSLTVLYNKYLKKIPLRRLV 378
>tr|A9THA6|A9THA6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_222325 PE=4 SV=1 Length = 460
Score = 92.4 bits (228), Expect = 1e-17 Identities = 40/83 (48%), Positives = 66/83 (79%) Frame = +1
Query: 271 MRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQHLKIDPSVVGMAKVMG 450 MR+Q T+L + ++KPEI P+ WF++SYA+IP L +F+ QTQ+L++ SV+G+A+V+G Sbjct: 232 MREQITKLKESLQKPEIFKPLLWFLSSYAVIPGLGSALFYYQTQYLRLGASVIGLARVIG 291
Query: 451 QVGLMGGSALYSRYLEGMPLRKL 519 QVGL+ GS LY++ L+ +P+R++ Sbjct: 292 QVGLLFGSMLYNKCLKDVPIRRM 314
>tr|A3BJ43|A3BJ43_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_023065 PE=4 SV=1 Length = 431
Score = 92.4 bits (228), Expect = 1e-17 Identities = 39/84 (46%), Positives = 66/84 (78%) Frame = +1
Query: 271 MRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQHLKIDPSVVGMAKVMG 450 +R+QF+ L + + +I +P+ W M S+A++P L+GTMF QTQ+LK+DPSV+G++KV+G Sbjct: 210 LRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGTMFCFQTQYLKLDPSVIGLSKVVG 269
Query: 451 QVGLMGGSALYSRYLEGMPLRKLL 522 QV ++ + LY++YL+ +PLR+L+ Sbjct: 270 QVMVLSLTVLYNKYLKKIPLRRLV 293
>tr|Q9XIQ7|Q9XIQ7_ARATH F13O11.19 protein (Putative uncharacterized protein At1g64890) OS=Arabidopsis thaliana GN=At1g64890 PE=2 SV=1 Length = 442
Score = 91.7 bits (226), Expect = 2e-17 Identities = 41/100 (41%), Positives = 70/100 (70%) Frame = +1
Query: 223 RSEALSVQSDPAKVGGMRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQ 402 R ++L++ +P+ GG+R+ ++L +++KPEI + ++W S A++P L GTMFF QT+ Sbjct: 205 REKSLNLPENPSPAGGIRKHLSDLSHVLRKPEISYSIAWIAVSTAVVPVLTGTMFFYQTK 264
Query: 403 HLKIDPSVVGMAKVMGQVGLMGGSALYSRYLEGMPLRKLL 522 LKID S++G++KV GQ+ ++ Y+R+L+ M RKLL Sbjct: 265 FLKIDASLLGISKVFGQIAMLLWGFAYNRWLKAMRPRKLL 304
>tr|Q94AI3|Q94AI3_ARATH Putative uncharacterized protein At1g64890 OS=Arabidopsis thaliana GN=At1g64890 PE=2 SV=1 Length = 442
Score = 91.7 bits (226), Expect = 2e-17 Identities = 41/100 (41%), Positives = 70/100 (70%) Frame = +1
Query: 223 RSEALSVQSDPAKVGGMRQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQ 402 R ++L++ +P+ GG+R+ ++L +++KPEI + ++W S A++P L GTMFF QT+ Sbjct: 205 REKSLNLPENPSPAGGIRKHLSDLSHVLRKPEISYSIAWIAVSTAVVPVLTGTMFFYQTK 264
Query: 403 HLKIDPSVVGMAKVMGQVGLMGGSALYSRYLEGMPLRKLL 522 LKID S++G++KV GQ+ ++ Y+R+L+ M RKLL Sbjct: 265 FLKIDASLLGISKVFGQIAMLLWGFAYNRWLKAMRPRKLL 304
>tr|B6TYM7|B6TYM7_MAIZE Folate/biopterin transporter family protein OS=Zea mays PE=2 SV=1 Length = 520
Score = 91.7 bits (226), Expect = 2e-17 Identities = 39/82 (47%), Positives = 64/82 (78%) Frame = +1
Query: 274 RQQFTELIDLVKKPEICFPMSWFMASYAMIPTLAGTMFFSQTQHLKIDPSVVGMAKVMGQ 453 R+QF+ L+ +++ I +P++W M S+A++P L+GTMF QTQ+L +DPSV+G++KV+GQ Sbjct: 300 RKQFSNLMTAIREERILYPLAWIMTSFAVVPVLSGTMFCFQTQYLNLDPSVIGLSKVVGQ 359
Query: 454 VGLMGGSALYSRYLEGMPLRKL 519 V ++ + LY+RYL+ +PLR L Sbjct: 360 VMVLSLTVLYNRYLKRIPLRCL 381
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