BP913372 |
Clone id |
YMU001_000029_E06 |
Library |
YMU01 |
Length |
503 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_E06. |
Accession |
BP913372 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCCATGAAAGCCACTGTTATGCCAACTACGATAACGTCCCAATCTCCTGTCTGGCCTAG CAAAGTGGATAGAGCATTCGCCGAATAATAACCCAGAAGAAGAGAGAATAATTTCAAGGG AACCTGTGTCCGAGCATCAACTAATTTGGTGAGGAAGGAATTCCATGAGGACACTAATAA TCTAGAGAGGCGTGTGCCACCCGCAACTTTTTCAGCCCTGCTCTTTTTTGCAAATCCATC TTCTGAGCTTCCCTCATCCATTACTTGAGACCTTGCATAACAAACACTCCTGAAATAGAA AGAAGAGGAGATACAACATCTTTTTGACTTGTGAGGTGGTTTGTAGCTATCCTGTGGGAA GGCAATGCTAGTAAACGCTCTCTGCAAAGTTGACGAAGGTAACAACACCTCACAGCTGGT CACACTTTTGACCACCACCAGACCTTTGGAAGTGAAACACAGGCAGCAGGGTGCCATTGT CCCCTAAAAAATGGGACTCTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O80813 |
Definition |
sp|O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana |
Align length |
153 |
Score (bit) |
83.2 |
E-value |
6.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4FBE1 |
Definition |
tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea mays |
Align length |
67 |
Score (bit) |
80.1 |
E-value |
5.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913372|Adiantum capillus-veneris mRNA, clone: YMU001_000029_E06. (503 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea m... 80 5e-14 tr|A7R4B3|A7R4B3_VITVI Chromosome undetermined scaffold_644, who... 79 9e-14 tr|Q6EUE9|Q6EUE9_ORYSJ Antigen receptor-like OS=Oryza sativa sub... 77 4e-13 tr|B8AEK3|B8AEK3_ORYSI Putative uncharacterized protein OS=Oryza... 77 4e-13 tr|A3A4V6|A3A4V6_ORYSJ Putative uncharacterized protein OS=Oryza... 77 4e-13 tr|Q6EN61|Q6EN61_ORYSJ Os09g0287500 protein OS=Oryza sativa subs... 75 1e-12 tr|Q0P165|Q0P165_ORYSI Putative uncharacterized protein OS=Oryza... 75 1e-12 tr|A3BWY7|A3BWY7_ORYSJ Putative uncharacterized protein OS=Oryza... 75 1e-12 tr|B6SY75|B6SY75_MAIZE Putative uncharacterized protein OS=Zea m... 73 7e-12 tr|Q84VL0|Q84VL0_ARALY Putative antigen receptor (Fragment) OS=A... 71 3e-11 tr|A9RW08|A9RW08_PHYPA Predicted protein (Fragment) OS=Physcomit... 71 3e-11 tr|Q84K02|Q84K02_ARATH Putative antigen receptor (Fragment) OS=A... 70 4e-11 tr|Q9LES5|Q9LES5_ARATH Putative uncharacterized protein T8M16_16... 64 5e-09 tr|Q2V3N7|Q2V3N7_ARATH Uncharacterized protein At3g56830.1 OS=Ar... 64 5e-09 tr|Q0DLP9|Q0DLP9_ORYSJ Os03g0852600 protein (Fragment) OS=Oryza ... 60 8e-08 tr|A7PYD5|A7PYD5_VITVI Chromosome chr15 scaffold_37, whole genom... 57 4e-07 tr|Q1ACD9|Q1ACD9_CHAVU Putative uncharacterized protein ycf20 OS... 48 2e-04 tr|B7JY13|B7JY13_SYNP8 Putative uncharacterized protein OS=Synec... 43 0.010 tr|B4C2L8|B4C2L8_9CHRO Putative uncharacterized protein OS=Cyano... 43 0.010 tr|B4W5A6|B4W5A6_9CYAN Putative uncharacterized protein OS=Micro... 42 0.013 tr|B0JN13|B0JN13_MICAN Putative uncharacterized protein ycf20 OS... 42 0.021 tr|B5W7N3|B5W7N3_SPIMA Putative uncharacterized protein OS=Arthr... 40 0.048 tr|A8YH83|A8YH83_MICAE Genome sequencing data, contig C313 OS=Mi... 40 0.048 tr|A9BL80|A9BL80_9CRYP Putative uncharacterized protein OS=Crypt... 39 0.11 tr|Q10Y29|Q10Y29_TRIEI Putative uncharacterized protein OS=Trich... 38 0.24 tr|B2J391|B2J391_NOSP7 Putative uncharacterized protein OS=Nosto... 37 0.53 tr|A2CI67|A2CI67_CHLAT Hypothetical chloroplast RF20 OS=Chloroky... 36 0.90 tr|B1WS82|B1WS82_CYAA5 Putative uncharacterized protein OS=Cyano... 36 1.2 tr|A3IH07|A3IH07_9CHRO Putative uncharacterized protein OS=Cyano... 36 1.2 tr|A5WC90|A5WC90_PSYWF ABC transporter, CydDC cysteine exporter ... 35 2.0
>tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 232
Score = 80.1 bits (196), Expect = 5e-14 Identities = 38/67 (56%), Positives = 50/67 (74%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL ART P K+F +LLG+Y+ANAL+T+LGQTGDWDV+V G Sbjct: 121 GRTRLGRLIQAAARELLDKLNSARTNSPTKIFLVLLGFYTANALATILGQTGDWDVLVAG 180
Query: 21 ITVAFME 1 + VA +E Sbjct: 181 VVVAAIE 187
>tr|A7R4B3|A7R4B3_VITVI Chromosome undetermined scaffold_644, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004261001 PE=4 SV=1 Length = 209
Score = 79.3 bits (194), Expect = 9e-14 Identities = 37/67 (55%), Positives = 49/67 (73%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL R++ + L KL AR P+K+F LLLG+Y+ANAL+T+LGQTGDWDV+V G Sbjct: 98 GQTRLGRIVSAGGRQLLAKLNSARKNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAG 157
Query: 21 ITVAFME 1 + VA +E Sbjct: 158 VVVAAIE 164
>tr|Q6EUE9|Q6EUE9_ORYSJ Antigen receptor-like OS=Oryza sativa subsp. japonica GN=OJ1705_E12.41 PE=4 SV=1 Length = 217
Score = 77.4 bits (189), Expect = 4e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL AR+ P K+F +L G+Y+ANAL+T+LGQTGDWDV+V G Sbjct: 106 GRTRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAG 165
Query: 21 ITVAFME 1 + VA +E Sbjct: 166 VVVAAIE 172
>tr|B8AEK3|B8AEK3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06472 PE=4 SV=1 Length = 191
Score = 77.4 bits (189), Expect = 4e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL AR+ P K+F +L G+Y+ANAL+T+LGQTGDWDV+V G Sbjct: 80 GRTRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAG 139
Query: 21 ITVAFME 1 + VA +E Sbjct: 140 VVVAAIE 146
>tr|A3A4V6|A3A4V6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005828 PE=4 SV=1 Length = 167
Score = 77.4 bits (189), Expect = 4e-13 Identities = 36/67 (53%), Positives = 49/67 (73%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL AR+ P K+F +L G+Y+ANAL+T+LGQTGDWDV+V G Sbjct: 56 GRTRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAG 115
Query: 21 ITVAFME 1 + VA +E Sbjct: 116 VVVAAIE 122
>tr|Q6EN61|Q6EN61_ORYSJ Os09g0287500 protein OS=Oryza sativa subsp. japonica GN=P0663H05.33 PE=2 SV=1 Length = 196
Score = 75.5 bits (184), Expect = 1e-12 Identities = 37/67 (55%), Positives = 48/67 (71%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL AR + P K+F +LLG+Y+ANAL+T+LGQTGDWDV V Sbjct: 85 GRTRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAA 144
Query: 21 ITVAFME 1 I VA +E Sbjct: 145 IVVATIE 151
>tr|Q0P165|Q0P165_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30729 PE=4 SV=1 Length = 197
Score = 75.5 bits (184), Expect = 1e-12 Identities = 37/67 (55%), Positives = 48/67 (71%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL AR + P K+F +LLG+Y+ANAL+T+LGQTGDWDV V Sbjct: 86 GRTRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAA 145
Query: 21 ITVAFME 1 I VA +E Sbjct: 146 IVVATIE 152
>tr|A3BWY7|A3BWY7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027559 PE=4 SV=1 Length = 344
Score = 75.5 bits (184), Expect = 1e-12 Identities = 37/67 (55%), Positives = 48/67 (71%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL AR + P K+F +LLG+Y+ANAL+T+LGQTGDWDV V Sbjct: 85 GRTRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAA 144
Query: 21 ITVAFME 1 I VA +E Sbjct: 145 IVVATIE 151
>tr|B6SY75|B6SY75_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 231
Score = 73.2 bits (178), Expect = 7e-12 Identities = 37/67 (55%), Positives = 49/67 (73%) Frame = -3
Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22 G TRL RL+ ++ L KL ART P K+F +LL +Y+ANAL+T+LGQTGDWDV+V G Sbjct: 121 GRTRLGRLIQAAARELLDKLNSARTNSPTKIFLVLL-FYTANALATILGQTGDWDVLVAG 179
Query: 21 ITVAFME 1 + VA +E Sbjct: 180 VVVAAIE 186
>tr|Q84VL0|Q84VL0_ARALY Putative antigen receptor (Fragment) OS=Arabidopsis lyrata GN=At1g65420 PE=4 SV=1 Length = 92
Score = 70.9 bits (172), Expect = 3e-11 Identities = 33/58 (56%), Positives = 43/58 (74%) Frame = -3
Query: 174 VSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVGITVAFME 1 V+ L K+ AR P+K+F LLLG+Y+ANAL+T+LGQTGDWDV+V GI VA +E Sbjct: 2 VAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIE 59
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