BP913372
Clone id YMU001_000029_E06
Library
Length 503
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCCATGAAAGCCACTGTTATGCCAACTACGATAACGTCCCAATCTCCTGTCTGGCCTAG
CAAAGTGGATAGAGCATTCGCCGAATAATAACCCAGAAGAAGAGAGAATAATTTCAAGGG
AACCTGTGTCCGAGCATCAACTAATTTGGTGAGGAAGGAATTCCATGAGGACACTAATAA
TCTAGAGAGGCGTGTGCCACCCGCAACTTTTTCAGCCCTGCTCTTTTTTGCAAATCCATC
TTCTGAGCTTCCCTCATCCATTACTTGAGACCTTGCATAACAAACACTCCTGAAATAGAA
AGAAGAGGAGATACAACATCTTTTTGACTTGTGAGGTGGTTTGTAGCTATCCTGTGGGAA
GGCAATGCTAGTAAACGCTCTCTGCAAAGTTGACGAAGGTAACAACACCTCACAGCTGGT
CACACTTTTGACCACCACCAGACCTTTGGAAGTGAAACACAGGCAGCAGGGTGCCATTGT
CCCCTAAAAAATGGGACTCTCTT
■■Homology search results ■■ -
sp_hit_id O80813
Definition sp|O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana
Align length 153
Score (bit) 83.2
E-value 6.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913372|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_E06.
(503 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana... 83 6e-16
sp|Q9MUL5|YCF20_MESVI Uncharacterized protein ycf20 OS=Mesostigm... 58 3e-08
sp|Q1XDS2|YCF20_PORYE Uncharacterized protein ycf20 OS=Porphyra ... 47 4e-05
sp|P51214|YCF20_PORPU Uncharacterized protein ycf20 OS=Porphyra ... 45 2e-04
sp|O78445|YCF20_GUITH Uncharacterized protein ycf20 OS=Guillardi... 40 0.005
sp|P72983|YC20L_SYNY3 Ycf20-like protein OS=Synechocystis sp. (s... 36 0.089
sp|P48409|YCF20_GALSU Uncharacterized protein ycf20 OS=Galdieria... 35 0.20
sp|Q9MVP1|YCF20_CYACA Uncharacterized protein ycf20 OS=Cyanidium... 33 0.58
sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens GN=RYR... 33 0.98
sp|P34813|YCF20_AGLNE Uncharacterized protein ycf20 OS=Aglaotham... 32 1.7
sp|A2AKX3|SETX_MOUSE Probable helicase senataxin OS=Mus musculus... 31 2.9
sp|P23253|TCNA_TRYCR Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2... 30 4.9
sp|B1AY10|NFX1_MOUSE Transcriptional repressor NF-X1 OS=Mus musc... 30 8.3
sp|O95069|KCNK2_HUMAN Potassium channel subfamily K member 2 OS=... 30 8.3

>sp|O80813|YC20L_ARATH Ycf20-like protein OS=Arabidopsis thaliana
GN=At1g65420 PE=2 SV=2
Length = 197

Score = 83.2 bits (204), Expect = 6e-16
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Frame = -3

Query: 447 KGLVVVKSVTSCEVLLPSSTLQRAFTSIAFPQDSYKPPHKSKRCCISSSFYFRSVCYARS 268
KGL + +V + S TL TS +P S++ +++ +
Sbjct: 18 KGLSFMINVFHRRIKASSITL----TSFPYPMKSFQIRRPNRKIAFA------------- 60

Query: 267 QVMDEGSS---EDGFAKKSRAEKVA-GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSL 100
+D GSS + G ++ ++ G TRL R+ ++ L K+ AR P+K+F L
Sbjct: 61 --LDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIAIAGGKQLLGKINSARKNFPMKIFLL 118

Query: 99 LLGYYSANALSTLLGQTGDWDVIVVGITVAFME 1
LLG+Y+ANAL+T+LGQTGDWDV+V GI VA +E
Sbjct: 119 LLGFYTANALATILGQTGDWDVLVAGIVVAAIE 151


>sp|Q9MUL5|YCF20_MESVI Uncharacterized protein ycf20 OS=Mesostigma
viride GN=ycf20 PE=3 SV=1
Length = 116

Score = 57.8 bits (138), Expect = 3e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = -3

Query: 195 TRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVGIT 16
TRL+ + + +K+ + P+K+ LLLG++ A L+T+ GQTGDWDV+V GI
Sbjct: 4 TRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVAGIL 63

Query: 15 VAFME 1
VA +E
Sbjct: 64 VAMIE 68


>sp|Q1XDS2|YCF20_PORYE Uncharacterized protein ycf20 OS=Porphyra
yezoensis GN=ycf20 PE=3 SV=1
Length = 108

Score = 47.4 bits (111), Expect = 4e-05
Identities = 25/65 (38%), Positives = 36/65 (55%)
Frame = -3

Query: 195 TRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVGIT 16
TRLS + KL + +++ L SLLLG++ + LST+ GQTGDW +I +
Sbjct: 4 TRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASLI 63

Query: 15 VAFME 1
VA E
Sbjct: 64 VAATE 68


>sp|P51214|YCF20_PORPU Uncharacterized protein ycf20 OS=Porphyra
purpurea GN=ycf20 PE=3 SV=1
Length = 108

Score = 44.7 bits (104), Expect = 2e-04
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = -3

Query: 195 TRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVGIT 16
T+LS + ++L + ++ L SLLLG++ + LST+ GQTGDW +I +
Sbjct: 4 TKLSIFFSYFVQNLSSRLYYSLNELTAGLISLLLGFFISTGLSTIPGQTGDWGIIAASLI 63

Query: 15 VAFME 1
VA +E
Sbjct: 64 VAAIE 68


>sp|O78445|YCF20_GUITH Uncharacterized protein ycf20 OS=Guillardia
theta GN=ycf20 PE=3 SV=1
Length = 64

Score = 40.4 bits (93), Expect = 0.005
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -3

Query: 111 LFSLLLGYYSANALSTLLGQTGDWDVIVVGITVAFME 1
L ++L G++ + LST+L QTGDW ++ I VA +E
Sbjct: 8 LLTILFGFFLSTLLSTILSQTGDWSILAASILVATIE 44


>sp|P72983|YC20L_SYNY3 Ycf20-like protein OS=Synechocystis sp.
(strain PCC 6803) GN=sll1509 PE=3 SV=1
Length = 109

Score = 36.2 bits (82), Expect = 0.089
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = -3

Query: 198 GTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVGI 19
G +LS+ + W ++ L L S L G++ A++T GQ WDV+
Sbjct: 14 GQQLSQFFRNPWR-----------RISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAF 62

Query: 18 TVAFME 1
+ F E
Sbjct: 63 ILLFCE 68


>sp|P48409|YCF20_GALSU Uncharacterized protein ycf20 OS=Galdieria
sulphuraria GN=ycf20 PE=3 SV=1
Length = 83

Score = 35.0 bits (79), Expect = 0.20
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3

Query: 117 LKLFSLLLGYYSANALSTLLGQTGDWDVIVVGITVAFME 1
L + + LLG +S+N L T+ QTGDW + + +A E
Sbjct: 3 LIIINTLLGIFSSNLLCTIYTQTGDWSLYLTSCIIALYE 41


>sp|Q9MVP1|YCF20_CYACA Uncharacterized protein ycf20 OS=Cyanidium
caldarium GN=ycf20 PE=3 SV=1
Length = 101

Score = 33.5 bits (75), Expect = 0.58
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -3

Query: 108 FSLLLGYYSANALSTLLGQTGDWDVIVVGITVAFME 1
F L G++ ++A ST+L QT +W ++ I ++ +E
Sbjct: 22 FIFLFGFFLSSATSTILIQTNEWSILTAAILISIVE 57


>sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens GN=RYR2
PE=1 SV=2
Length = 4965

Score = 32.7 bits (73), Expect = 0.98
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3

Query: 39 PNLLSGLAKWIEHSPNNNPEEERIISREPVSEH 137
P L S +++W EH P NNPE + SEH
Sbjct: 3238 PMLCSYMSRWWEHGPENNPERAEMCCTALNSEH 3270


>sp|P34813|YCF20_AGLNE Uncharacterized protein ycf20
OS=Aglaothamnion neglectum GN=ycf20 PE=3 SV=1
Length = 100

Score = 32.0 bits (71), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3

Query: 117 LKLFSLLLGYYSANALSTLLGQTGDWDVIVVGITVAFME 1
L+L SL LGY+ + ++ +TGDW +I + V E
Sbjct: 21 LQLISLFLGYFFCTIICSIPKETGDWGLITALLIVGINE 59


tr_hit_id B4FBE1
Definition tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 67
Score (bit) 80.1
E-value 5.0e-14
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913372|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_E06.
(503 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea m... 80 5e-14
tr|A7R4B3|A7R4B3_VITVI Chromosome undetermined scaffold_644, who... 79 9e-14
tr|Q6EUE9|Q6EUE9_ORYSJ Antigen receptor-like OS=Oryza sativa sub... 77 4e-13
tr|B8AEK3|B8AEK3_ORYSI Putative uncharacterized protein OS=Oryza... 77 4e-13
tr|A3A4V6|A3A4V6_ORYSJ Putative uncharacterized protein OS=Oryza... 77 4e-13
tr|Q6EN61|Q6EN61_ORYSJ Os09g0287500 protein OS=Oryza sativa subs... 75 1e-12
tr|Q0P165|Q0P165_ORYSI Putative uncharacterized protein OS=Oryza... 75 1e-12
tr|A3BWY7|A3BWY7_ORYSJ Putative uncharacterized protein OS=Oryza... 75 1e-12
tr|B6SY75|B6SY75_MAIZE Putative uncharacterized protein OS=Zea m... 73 7e-12
tr|Q84VL0|Q84VL0_ARALY Putative antigen receptor (Fragment) OS=A... 71 3e-11
tr|A9RW08|A9RW08_PHYPA Predicted protein (Fragment) OS=Physcomit... 71 3e-11
tr|Q84K02|Q84K02_ARATH Putative antigen receptor (Fragment) OS=A... 70 4e-11
tr|Q9LES5|Q9LES5_ARATH Putative uncharacterized protein T8M16_16... 64 5e-09
tr|Q2V3N7|Q2V3N7_ARATH Uncharacterized protein At3g56830.1 OS=Ar... 64 5e-09
tr|Q0DLP9|Q0DLP9_ORYSJ Os03g0852600 protein (Fragment) OS=Oryza ... 60 8e-08
tr|A7PYD5|A7PYD5_VITVI Chromosome chr15 scaffold_37, whole genom... 57 4e-07
tr|Q1ACD9|Q1ACD9_CHAVU Putative uncharacterized protein ycf20 OS... 48 2e-04
tr|B7JY13|B7JY13_SYNP8 Putative uncharacterized protein OS=Synec... 43 0.010
tr|B4C2L8|B4C2L8_9CHRO Putative uncharacterized protein OS=Cyano... 43 0.010
tr|B4W5A6|B4W5A6_9CYAN Putative uncharacterized protein OS=Micro... 42 0.013
tr|B0JN13|B0JN13_MICAN Putative uncharacterized protein ycf20 OS... 42 0.021
tr|B5W7N3|B5W7N3_SPIMA Putative uncharacterized protein OS=Arthr... 40 0.048
tr|A8YH83|A8YH83_MICAE Genome sequencing data, contig C313 OS=Mi... 40 0.048
tr|A9BL80|A9BL80_9CRYP Putative uncharacterized protein OS=Crypt... 39 0.11
tr|Q10Y29|Q10Y29_TRIEI Putative uncharacterized protein OS=Trich... 38 0.24
tr|B2J391|B2J391_NOSP7 Putative uncharacterized protein OS=Nosto... 37 0.53
tr|A2CI67|A2CI67_CHLAT Hypothetical chloroplast RF20 OS=Chloroky... 36 0.90
tr|B1WS82|B1WS82_CYAA5 Putative uncharacterized protein OS=Cyano... 36 1.2
tr|A3IH07|A3IH07_9CHRO Putative uncharacterized protein OS=Cyano... 36 1.2
tr|A5WC90|A5WC90_PSYWF ABC transporter, CydDC cysteine exporter ... 35 2.0

>tr|B4FBE1|B4FBE1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 232

Score = 80.1 bits (196), Expect = 5e-14
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL ART P K+F +LLG+Y+ANAL+T+LGQTGDWDV+V G
Sbjct: 121 GRTRLGRLIQAAARELLDKLNSARTNSPTKIFLVLLGFYTANALATILGQTGDWDVLVAG 180

Query: 21 ITVAFME 1
+ VA +E
Sbjct: 181 VVVAAIE 187


>tr|A7R4B3|A7R4B3_VITVI Chromosome undetermined scaffold_644, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00004261001 PE=4 SV=1
Length = 209

Score = 79.3 bits (194), Expect = 9e-14
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL R++ + L KL AR P+K+F LLLG+Y+ANAL+T+LGQTGDWDV+V G
Sbjct: 98 GQTRLGRIVSAGGRQLLAKLNSARKNFPMKVFLLLLGFYTANALATILGQTGDWDVLVAG 157

Query: 21 ITVAFME 1
+ VA +E
Sbjct: 158 VVVAAIE 164


>tr|Q6EUE9|Q6EUE9_ORYSJ Antigen receptor-like OS=Oryza sativa subsp.
japonica GN=OJ1705_E12.41 PE=4 SV=1
Length = 217

Score = 77.4 bits (189), Expect = 4e-13
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL AR+ P K+F +L G+Y+ANAL+T+LGQTGDWDV+V G
Sbjct: 106 GRTRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAG 165

Query: 21 ITVAFME 1
+ VA +E
Sbjct: 166 VVVAAIE 172


>tr|B8AEK3|B8AEK3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_06472 PE=4 SV=1
Length = 191

Score = 77.4 bits (189), Expect = 4e-13
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL AR+ P K+F +L G+Y+ANAL+T+LGQTGDWDV+V G
Sbjct: 80 GRTRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAG 139

Query: 21 ITVAFME 1
+ VA +E
Sbjct: 140 VVVAAIE 146


>tr|A3A4V6|A3A4V6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_005828 PE=4 SV=1
Length = 167

Score = 77.4 bits (189), Expect = 4e-13
Identities = 36/67 (53%), Positives = 49/67 (73%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL AR+ P K+F +L G+Y+ANAL+T+LGQTGDWDV+V G
Sbjct: 56 GRTRLGRLIQAAGRELLEKLNSARSNSPTKIFLVLFGFYTANALATILGQTGDWDVLVAG 115

Query: 21 ITVAFME 1
+ VA +E
Sbjct: 116 VVVAAIE 122


>tr|Q6EN61|Q6EN61_ORYSJ Os09g0287500 protein OS=Oryza sativa subsp.
japonica GN=P0663H05.33 PE=2 SV=1
Length = 196

Score = 75.5 bits (184), Expect = 1e-12
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL AR + P K+F +LLG+Y+ANAL+T+LGQTGDWDV V
Sbjct: 85 GRTRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAA 144

Query: 21 ITVAFME 1
I VA +E
Sbjct: 145 IVVATIE 151


>tr|Q0P165|Q0P165_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_30729 PE=4 SV=1
Length = 197

Score = 75.5 bits (184), Expect = 1e-12
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL AR + P K+F +LLG+Y+ANAL+T+LGQTGDWDV V
Sbjct: 86 GRTRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAA 145

Query: 21 ITVAFME 1
I VA +E
Sbjct: 146 IVVATIE 152


>tr|A3BWY7|A3BWY7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_027559 PE=4 SV=1
Length = 344

Score = 75.5 bits (184), Expect = 1e-12
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL AR + P K+F +LLG+Y+ANAL+T+LGQTGDWDV V
Sbjct: 85 GRTRLGRLIQAAARELLEKLNSARNKSPTKIFLVLLGFYTANALATVLGQTGDWDVFVAA 144

Query: 21 ITVAFME 1
I VA +E
Sbjct: 145 IVVATIE 151


>tr|B6SY75|B6SY75_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 231

Score = 73.2 bits (178), Expect = 7e-12
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -3

Query: 201 GGTRLSRLLVSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVG 22
G TRL RL+ ++ L KL ART P K+F +LL +Y+ANAL+T+LGQTGDWDV+V G
Sbjct: 121 GRTRLGRLIQAAARELLDKLNSARTNSPTKIFLVLL-FYTANALATILGQTGDWDVLVAG 179

Query: 21 ITVAFME 1
+ VA +E
Sbjct: 180 VVVAAIE 186


>tr|Q84VL0|Q84VL0_ARALY Putative antigen receptor (Fragment)
OS=Arabidopsis lyrata GN=At1g65420 PE=4 SV=1
Length = 92

Score = 70.9 bits (172), Expect = 3e-11
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -3

Query: 174 VSSWNSFLTKLVDARTQVPLKLFSLLLGYYSANALSTLLGQTGDWDVIVVGITVAFME 1
V+ L K+ AR P+K+F LLLG+Y+ANAL+T+LGQTGDWDV+V GI VA +E
Sbjct: 2 VAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIE 59