| BP913377 |
| Clone id |
YMU001_000029_E11 |
| Library |
YMU01 |
| Length |
439 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_E11. |
| Accession |
BP913377 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
AACTGGAAGTGAAACTGTGACAAGATGTTCGCCCTCCACATGTGCTTTTCCGATAGCTGC
TTCTGTGACAAGAAGTAGCGTAAACTCTAATGGTCTGTAAAGACAGTAAAATCCGCTCCG
AGTAGGTAGTGCCGCCACTGAGTAAGAGCATAGATAACCGCCAAAAGCTCTCTCTCATAA
ATCTGTGTTGTCAATTCCGGCCTTGAGAACAATCGGCTCTCGTAAGCAATGACATGGCCT
TCTTGCATTAAGACCGTACCTAGACTACGATCACAAGCATCACAATATACTTCAAATGAC
TTCTACAAGTCCGGCAAAGTCAAAACTGGTCCCGTAGTCAATTTCTCTTTCAATGTCTGA
AAGGCAGTCACCTTTGTGGGTCCCCACGAGAAAGGGACTCCTTTCTGCGTCAAGATATGC
AAAGGGGAAGCAACCTCTA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
P04323 |
| Definition |
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster |
| Align length |
146 |
| Score (bit) |
90.1 |
| E-value |
4.0e-18 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913377|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_E11.
(439 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 90 4e-18
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 89 1e-17
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 76 5e-14
sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from tra... 73 6e-13
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 72 1e-12
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 72 1e-12
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 72 1e-12
sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from tra... 65 9e-11
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v... 58 2e-08
sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus... 58 2e-08
sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi... 57 3e-08
sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi... 57 3e-08
sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi... 57 3e-08
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia... 56 7e-08
sp|P09523|POL_FMVD Enzymatic polyprotein OS=Figwort mosaic virus... 53 6e-07
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen... 52 8e-07
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr... 51 2e-06
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (... 50 4e-06
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ... 49 1e-05
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 44 2e-04
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 44 3e-04
sp|P05400|POL_CERV Enzymatic polyprotein OS=Carnation etched rin... 44 3e-04
sp|Q02964|POL_CAMVE Enzymatic polyprotein OS=Cauliflower mosaic ... 40 0.006
sp|P03556|POL_CAMVD Enzymatic polyprotein OS=Cauliflower mosaic ... 40 0.006
sp|P03555|POL_CAMVC Enzymatic polyprotein OS=Cauliflower mosaic ... 40 0.006
sp|P03554|POL_CAMVS Enzymatic polyprotein OS=Cauliflower mosaic ... 39 0.007
sp|Q00962|POL_CAMVN Enzymatic polyprotein OS=Cauliflower mosaic ... 39 0.007
sp|Q52QI2|RTL1_BOVIN Retrotransposon-like protein 1 OS=Bos tauru... 36 0.061
sp|Q7M732|RTL1_MOUSE Retrotransposon-like protein 1 OS=Mus muscu... 35 0.14
sp|Q7TD08|POL_CYLCV Enzymatic polyprotein OS=Cestrum yellow leaf... 35 0.14
>sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from
transposon 17.6 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1058
Score = 90.1 bits (222), Expect = 4e-18
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 2/146 (1%)
Frame = -3
Query: 437 EVASPLHILTQKGVPF-SWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSL 261
++A P+ +K + + P +AF+ LK ++ P+L +PD K F + DA D +L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520
Query: 260 GTVLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SL 81
G VL Q+GH ++Y SR + E+ E+ELLA+++A +RHYLLG F + +DH L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580
Query: 80 RYFLSQKQLSEK-HMWRANILSQFHF 6
+ K + K WR LS+F F
Sbjct: 581 SWLYRMKDPNSKLTRWRVK-LSEFDF 605
>sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from
transposon 297 OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1059
Score = 88.6 bits (218), Expect = 1e-17
Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = -3
Query: 371 VTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGTVLMQEGHVIAYESRLFSRPEL 192
+ AF+ LK + P+L LPD K F + DA + +LG VL Q GH I++ SR + EL
Sbjct: 483 IEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHEL 542
Query: 191 TTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRYFLSQKQLSEK-HMWRANILSQ 15
E+ELLA+++A +RHYLLG F + +DH LR+ + K+ K WR LS+
Sbjct: 543 NYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERWRVR-LSE 601
Query: 14 FHFQ 3
+ F+
Sbjct: 602 YQFK 605
>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
transposon 412 OS=Drosophila melanogaster GN=POL PE=4
SV=1
Length = 1237
Score = 76.3 bits (186), Expect = 5e-14
Identities = 49/127 (38%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = -3
Query: 413 LTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGTVLMQE-- 240
L +K VPF W AF LK +L +L PD K F + DA ++ G VL Q
Sbjct: 577 LCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHN 636
Query: 239 GHV--IAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRYFLS 66
GH +AY SR F++ E E+EL A+ +A+ +R Y+ G FTV TDH L Y S
Sbjct: 637 GHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFS 696
Query: 65 QKQLSEK 45
S K
Sbjct: 697 MVNPSSK 703
>sp|P10401|POLY_DROME Retrovirus-related Pol polyprotein from
transposon gypsy OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1035
Score = 72.8 bits (177), Expect = 6e-13
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 3/130 (2%)
Frame = -3
Query: 404 KGVPFSWGPTKVTAFQTLKEKLTTGPV-LTLPDL*KSFEVYCDACDRSLGTVLMQEGHVI 228
K +P + T+ AFQ L+ L + V L PD K F++ DA +G VL QEG I
Sbjct: 458 KKIPVEFNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQEGRPI 517
Query: 227 AYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGA-DFTVFTDH*SLRYFLSQKQLS 51
SR +PE ERELLA+++AL + +++L G+ + +FTDH L + ++ + +
Sbjct: 518 TMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTN 577
Query: 50 EK-HMWRANI 24
K W++ I
Sbjct: 578 AKIKRWKSYI 587
>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333
Score = 72.0 bits (175), Expect = 1e-12
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLG 258
++ PL+ L +K V + W PT+ A + +K+ L + PVL D K + DA D ++G
Sbjct: 661 QLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVG 720
Query: 257 TVLMQEG-----HVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGA--DFTVF 99
VL Q+ + + Y S S+ +L + ++E+LA+I +L WRHYL F +
Sbjct: 721 AVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKIL 780
Query: 98 TDH*SL 81
TDH +L
Sbjct: 781 TDHRNL 786
>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333
Score = 72.0 bits (175), Expect = 1e-12
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLG 258
++ PL+ L +K V + W PT+ A + +K+ L + PVL D K + DA D ++G
Sbjct: 661 QLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVG 720
Query: 257 TVLMQEG-----HVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGA--DFTVF 99
VL Q+ + + Y S S+ +L + ++E+LA+I +L WRHYL F +
Sbjct: 721 AVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKIL 780
Query: 98 TDH*SL 81
TDH +L
Sbjct: 781 TDHRNL 786
>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333
Score = 72.0 bits (175), Expect = 1e-12
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLG 258
++ PL+ L +K V + W PT+ A + +K+ L + PVL D K + DA D ++G
Sbjct: 661 QLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVG 720
Query: 257 TVLMQEG-----HVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGA--DFTVF 99
VL Q+ + + Y S S+ +L + ++E+LA+I +L WRHYL F +
Sbjct: 721 AVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKIL 780
Query: 98 TDH*SL 81
TDH +L
Sbjct: 781 TDHRNL 786
>sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from
transposon opus OS=Drosophila melanogaster GN=pol PE=4
SV=1
Length = 1003
Score = 65.5 bits (158), Expect = 9e-11
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Frame = -3
Query: 437 EVASPLHILTQ-----------KGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFE 291
+VA PL LT+ VP + T + +F LK L + +L P K F
Sbjct: 377 KVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFH 436
Query: 290 VYCDACDRSLGTVLMQEGH----VIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYL 123
+ DA + ++G VL Q+ IAY SR ++ E E+E+LA+I++L R YL
Sbjct: 437 LTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYL 496
Query: 122 LGA-DFTVFTDH*SLRYFLSQKQLSEK-HMWRANI 24
GA V+TDH L + L + + K W+A I
Sbjct: 497 YGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARI 531
>sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia
virus GN=pol PE=1 SV=2
Length = 1199
Score = 57.8 bits (138), Expect = 2e-08
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCD 279
E+A+PL+ LT+ G F+WGP + A+Q +K+ L T P L LPDL K FE++ D
Sbjct: 439 EMAAPLYPLTKTGTLFNWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVD 491
>sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus
GN=pol PE=3 SV=2
Length = 1196
Score = 57.8 bits (138), Expect = 2e-08
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCD 279
E+A+PL+ LT+ G F+WGP + A+Q +K+ L T P L LPDL K FE++ D
Sbjct: 439 EMAAPLYPLTKTGTLFNWGPDQQKAYQEIKQALLTAPALGLPDLTKPFELFVD 491
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q94I07 |
| Definition |
tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa |
| Align length |
143 |
| Score (bit) |
129.0 |
| E-value |
6.0e-29 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913377|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_E11.
(439 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa GN=... 129 6e-29
tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gy... 129 6e-29
tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 129 7e-29
tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 128 1e-28
tr|Q6UUN7|Q6UUN7_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 128 2e-28
tr|Q7XRN3|Q7XRN3_ORYSJ OSJNBa0024J22.19 protein OS=Oryza sativa ... 127 2e-28
tr|Q0E1H7|Q0E1H7_ORYSJ Os02g0442200 protein OS=Oryza sativa subs... 127 2e-28
tr|Q01KW5|Q01KW5_ORYSA H0211A12.9 protein OS=Oryza sativa GN=H02... 127 2e-28
tr|Q7XR16|Q7XR16_ORYSJ OSJNBb0022F23.14 protein OS=Oryza sativa ... 127 4e-28
tr|Q2R2D1|Q2R2D1_ORYSJ Retrotransposon protein, putative, Ty3-gy... 126 5e-28
tr|Q7XRJ2|Q7XRJ2_ORYSJ OSJNBa0042D13.18 protein OS=Oryza sativa ... 125 8e-28
tr|A5BR83|A5BR83_VITVI Putative uncharacterized protein OS=Vitis... 125 8e-28
tr|Q6UU57|Q6UU57_ORYSJ Putative polyprotein OS=Oryza sativa subs... 125 1e-27
tr|Q8W1D1|Q8W1D1_MAIZE Gag-pol OS=Zea mays PE=4 SV=1 124 2e-27
tr|Q5W696|Q5W696_ORYSJ Putative polyprotein OS=Oryza sativa subs... 124 2e-27
tr|Q84T48|Q84T48_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 124 2e-27
tr|Q7XWL8|Q7XWL8_ORYSJ OSJNBb0052B05.11 protein OS=Oryza sativa ... 124 2e-27
tr|Q7XRT3|Q7XRT3_ORYSJ OSJNBa0042F21.10 protein OS=Oryza sativa ... 124 2e-27
tr|Q7XBQ5|Q7XBQ5_ORYSJ Putative retroelement (Retrotransposon pr... 124 2e-27
tr|Q7X825|Q7X825_ORYSJ OSJNBa0020J04.1 protein OS=Oryza sativa s... 124 2e-27
tr|Q60D73|Q60D73_ORYSJ Putative polyprotein OS=Oryza sativa subs... 124 2e-27
tr|Q2QTE7|Q2QTE7_ORYSJ Retrotransposon protein, putative, Ty3-gy... 124 2e-27
tr|Q2QT10|Q2QT10_ORYSJ Retrotransposon protein, putative, Ty3-gy... 124 2e-27
tr|Q2QSP0|Q2QSP0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 124 2e-27
tr|Q10IR3|Q10IR3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 124 2e-27
tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 124 2e-27
tr|A5C4G3|A5C4G3_VITVI Putative uncharacterized protein OS=Vitis... 124 2e-27
tr|A5C4G2|A5C4G2_VITVI Putative uncharacterized protein (Fragmen... 124 2e-27
tr|Q94I09|Q94I09_ORYSA Putative retroelement OS=Oryza sativa GN=... 124 3e-27
tr|Q8LMW1|Q8LMW1_ORYSJ Putative polyprotein (Retrotransposon pro... 124 3e-27
>tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa
GN=OSJNBa0034E23.18 PE=4 SV=1
Length = 2447
Score = 129 bits (325), Expect = 6e-29
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL++LT+KGVPF+WG ++ AF LK+KLT P+L LPD K+FE+ CDA LG
Sbjct: 968 IAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGG 1027
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VL+QEG +AY S S P L Y++EL A++ L W+HYL +F + +DH SL++
Sbjct: 1028 VLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKH 1087
Query: 74 FLSQKQLSEKHMWRANILSQFHF 6
SQ +L+ +H + F +
Sbjct: 1088 IRSQGKLNRRHAKWVEFIESFPY 1110
Score = 124 bits (310), Expect = 3e-27
Identities = 64/129 (49%), Positives = 81/129 (62%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLG 258
++A P+ L +K F W P AFQTLKEKL + PVL LPD K F VYCDA + LG
Sbjct: 1759 KIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLG 1818
Query: 257 TVLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLR 78
VLMQEGHV+AY SR E ++ EL AV++AL WRHYL+G ++TDH SL+
Sbjct: 1819 CVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLK 1878
Query: 77 YFLSQKQLS 51
Y +Q L+
Sbjct: 1879 YIFTQSDLN 1887
>tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g16560 PE=4 SV=1
Length = 2447
Score = 129 bits (325), Expect = 6e-29
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL++LT+KGVPF+WG ++ AF LK+KLT P+L LPD K+FE+ CDA LG
Sbjct: 968 IAAPLNVLTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGG 1027
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VL+QEG +AY S S P L Y++EL A++ L W+HYL +F + +DH SL++
Sbjct: 1028 VLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKH 1087
Query: 74 FLSQKQLSEKHMWRANILSQFHF 6
SQ +L+ +H + F +
Sbjct: 1088 IRSQGKLNRRHAKWVEFIESFPY 1110
Score = 124 bits (310), Expect = 3e-27
Identities = 64/129 (49%), Positives = 81/129 (62%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLG 258
++A P+ L +K F W P AFQTLKEKL + PVL LPD K F VYCDA + LG
Sbjct: 1759 KIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLILPDTRKDFMVYCDASPQGLG 1818
Query: 257 TVLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLR 78
VLMQEGHV+AY SR E ++ EL AV++AL WRHYL+G ++TDH SL+
Sbjct: 1819 CVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLK 1878
Query: 77 YFLSQKQLS 51
Y +Q L+
Sbjct: 1879 YIFTQSDLN 1887
>tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1
Length = 923
Score = 129 bits (324), Expect = 7e-29
Identities = 64/128 (50%), Positives = 84/128 (65%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL LT+KG PF W +FQTLK+KL T PVLT+PD +F +Y DA + LG
Sbjct: 243 IATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGC 302
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VLMQ+G V+AY SR E ++ EL AV++AL WRHYL G +FTDH SL+Y
Sbjct: 303 VLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKY 362
Query: 74 FLSQKQLS 51
F +QK+L+
Sbjct: 363 FFTQKELN 370
>tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa
subsp. japonica GN=OSJNBa0095C12.16 PE=4 SV=1
Length = 1619
Score = 128 bits (322), Expect = 1e-28
Identities = 62/143 (43%), Positives = 90/143 (62%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL+ LT+KGVPF+WG ++ AF LK KLT P+L LPD K+FE+ CDA LG
Sbjct: 947 IAAPLNALTKKGVPFTWGTSQENAFHMLKHKLTHAPLLQLPDFNKTFELECDASGIGLGG 1006
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VL+QEG ++AY S S P L Y++EL A++ L W+HYL +F + +DH SL++
Sbjct: 1007 VLLQEGKLVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKH 1066
Query: 74 FLSQKQLSEKHMWRANILSQFHF 6
SQ +L+ +H + F +
Sbjct: 1067 IRSQGKLNRRHAKWVEFIESFPY 1089
>tr|Q6UUN7|Q6UUN7_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa
subsp. japonica GN=OSJNBa0095C12.8 PE=4 SV=1
Length = 1234
Score = 128 bits (321), Expect = 2e-28
Identities = 62/143 (43%), Positives = 90/143 (62%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL+ LT+KGVPF+WG ++ AF LK+KLT P+L LPD K+FE+ CDA LG
Sbjct: 784 IAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGG 843
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VL+QEG +AY S S P L Y++EL A++ L W+HYL +F + +DH SL++
Sbjct: 844 VLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKH 903
Query: 74 FLSQKQLSEKHMWRANILSQFHF 6
SQ +L+ +H + F +
Sbjct: 904 IRSQGKLNRRHAKWVEFIESFPY 926
>tr|Q7XRN3|Q7XRN3_ORYSJ OSJNBa0024J22.19 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0024J22.19 PE=4 SV=2
Length = 1667
Score = 127 bits (320), Expect = 2e-28
Identities = 62/143 (43%), Positives = 90/143 (62%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL+ LT+KGVPF+WG ++ AF LK+KLT P+L LPD K+FE+ CDA LG
Sbjct: 891 IAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGG 950
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VL+QEG +AY S S P L Y++EL A++ L W+HYL +F + +DH SL++
Sbjct: 951 VLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKH 1010
Query: 74 FLSQKQLSEKHMWRANILSQFHF 6
SQ +L+ +H + F +
Sbjct: 1011 IHSQGKLNRRHAKWVEFIESFPY 1033
>tr|Q0E1H7|Q0E1H7_ORYSJ Os02g0442200 protein OS=Oryza sativa subsp.
japonica GN=Os02g0442200 PE=4 SV=1
Length = 683
Score = 127 bits (320), Expect = 2e-28
Identities = 63/129 (48%), Positives = 85/129 (65%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLG 258
++A P+ L +K + W +FQTLKEKLTT PVL LPD+ KSF++YCDA + LG
Sbjct: 414 KIAKPMTQLLKKNEKYVWSAECEQSFQTLKEKLTTAPVLILPDIHKSFDIYCDASRQGLG 473
Query: 257 TVLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLR 78
VLMQEG V+AY SR E+ ++ EL +V++AL WRHYL+G ++TDH SL+
Sbjct: 474 CVLMQEGRVVAYASRQLRPHEVNYPTHDLELASVVHALKIWRHYLIGNRCEIYTDHKSLK 533
Query: 77 YFLSQKQLS 51
Y LSQ L+
Sbjct: 534 YILSQSDLN 542
>tr|Q01KW5|Q01KW5_ORYSA H0211A12.9 protein OS=Oryza sativa
GN=H0211A12.9 PE=4 SV=1
Length = 1667
Score = 127 bits (320), Expect = 2e-28
Identities = 62/143 (43%), Positives = 90/143 (62%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL+ LT+KGVPF+WG ++ AF LK+KLT P+L LPD K+FE+ CDA LG
Sbjct: 891 IAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGG 950
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VL+QEG +AY S S P L Y++EL A++ L W+HYL +F + +DH SL++
Sbjct: 951 VLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKH 1010
Query: 74 FLSQKQLSEKHMWRANILSQFHF 6
SQ +L+ +H + F +
Sbjct: 1011 IHSQGKLNRRHAKWVEFIESFPY 1033
>tr|Q7XR16|Q7XR16_ORYSJ OSJNBb0022F23.14 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0022F23.14 PE=4 SV=1
Length = 1431
Score = 127 bits (318), Expect = 4e-28
Identities = 61/143 (42%), Positives = 90/143 (62%)
Frame = -3
Query: 434 VASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLGT 255
+A+PL+ LT+KGVPF+WG ++ AF LK+KLT P+L LPD K+FE+ CDA LG
Sbjct: 913 IAAPLNALTKKGVPFTWGTSQENAFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGG 972
Query: 254 VLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLRY 75
VL+QEG +AY S + P L Y++EL A++ L W+HYL +F + +DH SL++
Sbjct: 973 VLLQEGKPVAYFSEKLTGPVLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKH 1032
Query: 74 FLSQKQLSEKHMWRANILSQFHF 6
SQ +L+ +H + F +
Sbjct: 1033 IRSQGKLNRRHAKWVEFIESFPY 1055
>tr|Q2R2D1|Q2R2D1_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g36220 PE=4 SV=1
Length = 1668
Score = 126 bits (317), Expect = 5e-28
Identities = 65/129 (50%), Positives = 82/129 (63%)
Frame = -3
Query: 437 EVASPLHILTQKGVPFSWGPTKVTAFQTLKEKLTTGPVLTLPDL*KSFEVYCDACDRSLG 258
++A P+ L +K F W P AFQTLKEKL + PVLTLPD K F VYCDA + LG
Sbjct: 1068 KIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSPVLTLPDTRKDFMVYCDASRQGLG 1127
Query: 257 TVLMQEGHVIAYESRLFSRPELTTQIYERELLAVIYALTQWRHYLLGADFTVFTDH*SLR 78
VLMQEGHV+AY SR E ++ EL AV++AL WRHYL+G ++TDH SL+
Sbjct: 1128 CVLMQEGHVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLK 1187
Query: 77 YFLSQKQLS 51
Y +Q L+
Sbjct: 1188 YIFTQSDLN 1196
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