BP913380 |
Clone id |
YMU001_000029_F02 |
Library |
YMU01 |
Length |
584 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_F02. |
Accession |
BP913380 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2084Contig1 |
Sequence |
CAGCTATTGATAATTGATATCACCGGAAAATTATATTTGCACCATTTCACGAAGTATACG TCTTTCTCGCAGCAACTTCGTAGGATTGTATTCCCTTGATATAGCCCACTAGCTAGCCAC ATCCACTACCTGCTGTGTGCTTTTGAAGATGACTGGAATTTATTCACAATCCCCAACACA AAGGGGGCTCCCTTTACTGTACATCCAGGTCCCTACAGGAGAATGTAAAGCCAAAGTTTG TGGAAAACGAGTTCTCAGCTTAGATCGAAGCCCGCGTCTGCAGTAATAGCATAAAGAAGC TTGGCTTTGAGAATGTCTTTCCTTTTATAAGGAGGTAGCTTTAGAAGATTCATGCACGTA GCCGAAGTCGGTAAGCGGTCCAGCATGTCATCTGACACGTCCTCGGGGGCAGCTCGTTGG ATACAAAATTGTGGTTCTAAATACTTGAACCCTAACAAAGGTCCTCGAGAGCACCCTGTA ACAAACTTGAGAAACTTCTGTTGAAGACCAGAATCCAACGTCTTGATGATCTCCCAGAAC ATATCAATCACAGGATGGTTCTCACTATAACCACCGGAATAATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RWB8 |
Definition |
sp|Q8RWB8|UPL6_ARATH E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana |
Align length |
109 |
Score (bit) |
163.0 |
E-value |
5.0e-40 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKQ9 |
Definition |
tr|B8LKQ9|B8LKQ9_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
109 |
Score (bit) |
184.0 |
E-value |
2.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913380|Adiantum capillus-veneris mRNA, clone: YMU001_000029_F02. (584 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKQ9|B8LKQ9_PICSI Putative uncharacterized protein OS=Picea... 184 2e-45 tr|A9T6J5|A9T6J5_PHYPA Predicted protein OS=Physcomitrella paten... 183 5e-45 tr|B3H5A6|B3H5A6_ARATH Uncharacterized protein At3g17205.2 OS=Ar... 163 6e-39 tr|Q5W724|Q5W724_ORYSJ Os05g0159000 protein OS=Oryza sativa subs... 161 2e-38 tr|A3B070|A3B070_ORYSJ Putative uncharacterized protein OS=Oryza... 161 2e-38 tr|A7Q8U7|A7Q8U7_VITVI Chromosome chr5 scaffold_64, whole genome... 158 2e-37 tr|B8AYD7|B8AYD7_ORYSI Putative uncharacterized protein OS=Oryza... 149 1e-34 tr|B6NZF1|B6NZF1_BRAFL Putative uncharacterized protein OS=Branc... 130 5e-29 tr|B6NZF0|B6NZF0_BRAFL Putative uncharacterized protein (Fragmen... 130 5e-29 tr|A8J200|A8J200_CHLRE Predicted protein OS=Chlamydomonas reinha... 125 2e-27 tr|Q1LY19|Q1LY19_DANRE Novel protein (Zgc:63649) OS=Danio rerio ... 121 2e-26 tr|A4S6U0|A4S6U0_OSTLU Predicted protein OS=Ostreococcus lucimar... 121 2e-26 tr|Q8AVN3|Q8AVN3_XENLA Kiaa0010-prov protein OS=Xenopus laevis G... 121 3e-26 tr|Q5ZMU5|Q5ZMU5_CHICK Putative uncharacterized protein OS=Gallu... 121 3e-26 tr|Q4R411|Q4R411_MACFA Testis cDNA clone: QtsA-12840, similar to... 121 3e-26 tr|Q0VB95|Q0VB95_MOUSE Ubiquitin protein ligase E3C OS=Mus muscu... 120 4e-26 tr|B4DHJ9|B4DHJ9_HUMAN cDNA FLJ61262, highly similar to Ubiquiti... 120 4e-26 tr|Q0P4P4|Q0P4P4_XENTR Ubiquitin protein ligase E3C OS=Xenopus t... 119 1e-25 tr|B8CES6|B8CES6_THAPS Putative uncharacterized protein OS=Thala... 119 2e-25 tr|B3S3R2|B3S3R2_TRIAD Putative uncharacterized protein OS=Trich... 117 6e-25 tr|Q16PR2|Q16PR2_AEDAE Ubiquitin protein ligase OS=Aedes aegypti... 115 2e-24 tr|Q16J44|Q16J44_AEDAE Ubiquitin protein ligase OS=Aedes aegypti... 115 2e-24 tr|B0W765|B0W765_CULQU Ubiquitin protein ligase OS=Culex quinque... 114 3e-24 tr|Q9AUK0|Q9AUK0_ORYSA Putative ubiquitin protein ligase OS=Oryz... 112 2e-23 tr|Q7Y005|Q7Y005_ORYSJ Putative ubiquitin protein ligase, 5'-par... 112 2e-23 tr|B8APK1|B8APK1_ORYSI Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|A3ALH3|A3ALH3_ORYSJ Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|A9SQ62|A9SQ62_PHYPA Predicted protein (Fragment) OS=Physcomit... 112 2e-23 tr|A7PPP1|A7PPP1_VITVI Chromosome chr8 scaffold_23, whole genome... 111 3e-23 tr|A6RAN9|A6RAN9_AJECN Predicted protein OS=Ajellomyces capsulat... 111 3e-23
>tr|B8LKQ9|B8LKQ9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 1032
Score = 184 bits (468), Expect = 2e-45 Identities = 84/109 (77%), Positives = 99/109 (90%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 +Y+GGYSE+HPVI+MFWE+IK Q+KFLKFVTGCSRGPLLGFKYLEP FCIQRAAP Sbjct: 924 HYAGGYSEDHPVIEMFWEVIKQFSLEQQKKFLKFVTGCSRGPLLGFKYLEPPFCIQRAAP 983
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 ED +++LDRLPTSATC+NLLKLPPY+ KD+L++KLLYAI+ADAGFDLS Sbjct: 984 EDAPEEVLDRLPTSATCVNLLKLPPYRSKDVLRSKLLYAISADAGFDLS 1032
>tr|A9T6J5|A9T6J5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_192116 PE=4 SV=1 Length = 1036
Score = 183 bits (465), Expect = 5e-45 Identities = 85/109 (77%), Positives = 97/109 (88%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 NY+GGY E+HPVI+MFWE+++ LD GLQQKFLKFVTGCSRGPLLGFK+LEPQFCIQRA Sbjct: 928 NYAGGYDEHHPVIEMFWEVVQKLDLGLQQKFLKFVTGCSRGPLLGFKHLEPQFCIQRAGL 987
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 +D S + LDRLPTSATCMNLLKLPPY+ K+I+ KLLYAITA AGFDLS Sbjct: 988 DDGSQEALDRLPTSATCMNLLKLPPYRSKEIIHEKLLYAITAGAGFDLS 1036
>tr|B3H5A6|B3H5A6_ARATH Uncharacterized protein At3g17205.2 OS=Arabidopsis thaliana GN=At3g17205 PE=4 SV=1 Length = 1015
Score = 163 bits (413), Expect = 6e-39 Identities = 77/109 (70%), Positives = 93/109 (85%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 NY+GGY H VIDMFWE++K+ + Q+KFLKFVTGCSRGPLLGFKYLEP FCIQRAA Sbjct: 908 NYAGGYHAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAA- 966
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 S++ +DRLPTSATCMNLLKLPPY+ K++L+ KL+YAI+A+AGFDLS Sbjct: 967 GSASNESVDRLPTSATCMNLLKLPPYQSKELLETKLMYAISAEAGFDLS 1015
>tr|Q5W724|Q5W724_ORYSJ Os05g0159000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0017J22.6 PE=4 SV=1 Length = 1030
Score = 161 bits (408), Expect = 2e-38 Identities = 75/109 (68%), Positives = 91/109 (83%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 NYSGGY +H +ID+FWE++K+ S Q+KFLKFVTGCSRGPLLGF+YLEP+FCIQRA Sbjct: 922 NYSGGYHPDHELIDIFWEVLKSFSSHNQKKFLKFVTGCSRGPLLGFQYLEPKFCIQRAGV 981
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 + ++ DRLPTSATCMNLLKLPPY+ K L++KLLYAI A+AGFDLS Sbjct: 982 PGMEEEDEDRLPTSATCMNLLKLPPYRNKTQLESKLLYAINAEAGFDLS 1030
>tr|A3B070|A3B070_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_016442 PE=4 SV=1 Length = 1164
Score = 161 bits (408), Expect = 2e-38 Identities = 75/109 (68%), Positives = 91/109 (83%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 NYSGGY +H +ID+FWE++K+ S Q+KFLKFVTGCSRGPLLGF+YLEP+FCIQRA Sbjct: 1056 NYSGGYHPDHELIDIFWEVLKSFSSHNQKKFLKFVTGCSRGPLLGFQYLEPKFCIQRAGV 1115
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 + ++ DRLPTSATCMNLLKLPPY+ K L++KLLYAI A+AGFDLS Sbjct: 1116 PGMEEEDEDRLPTSATCMNLLKLPPYRNKTQLESKLLYAINAEAGFDLS 1164
>tr|A7Q8U7|A7Q8U7_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033190001 PE=4 SV=1 Length = 1036
Score = 158 bits (400), Expect = 2e-37 Identities = 77/109 (70%), Positives = 87/109 (79%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 NY+GGY H VI+ FWE++K+ Q KFLKFVTGCSRGPLLGFKYLEP FCIQRAA Sbjct: 929 NYAGGYHSEHYVIETFWEVLKSFTLENQMKFLKFVTGCSRGPLLGFKYLEPLFCIQRAA- 987
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 S++ LDRLPTSATCMNLLKLPPY+ K+ + KLLYAI ADAGFDLS Sbjct: 988 GSASEEALDRLPTSATCMNLLKLPPYRSKEQMATKLLYAINADAGFDLS 1036
>tr|B8AYD7|B8AYD7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18547 PE=4 SV=1 Length = 1050
Score = 149 bits (376), Expect = 1e-34 Identities = 69/102 (67%), Positives = 86/102 (84%) Frame = -1
Query: 563 ENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAPEDVSDDM 384 ++H +ID+FWE++K+ S Q+KFLKFVTGCSRGPLLGF+YLEP+FCIQRA + ++ Sbjct: 949 QDHELIDIFWEVLKSFSSHNQKKFLKFVTGCSRGPLLGFQYLEPKFCIQRAGVPGMEEED 1008
Query: 383 LDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 DRLPTSATCMNLLKLPPY+ K L++KLLYAI A+AGFDLS Sbjct: 1009 EDRLPTSATCMNLLKLPPYRNKTQLESKLLYAINAEAGFDLS 1050
>tr|B6NZF1|B6NZF1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_239686 PE=4 SV=1 Length = 344
Score = 130 bits (327), Expect = 5e-29 Identities = 58/109 (53%), Positives = 82/109 (75%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 NYSGGY++ HPVI+ FW++++ +G ++ LKFVT CSR PLLGFK L P FCI P Sbjct: 242 NYSGGYTDEHPVIETFWKVVREFTNGQRRHLLKFVTSCSRPPLLGFKELYPAFCIHHGGP 301
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 E+ DRLPT++TCMNLLKLP ++ ++ +++KLLYA+ ++AGF+LS Sbjct: 302 EE------DRLPTASTCMNLLKLPEFQDEETMRSKLLYAVESNAGFELS 344
>tr|B6NZF0|B6NZF0_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_239625 PE=4 SV=1 Length = 1069
Score = 130 bits (327), Expect = 5e-29 Identities = 58/109 (53%), Positives = 82/109 (75%) Frame = -1
Query: 584 NYSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAP 405 NYSGGY++ HPVI+ FW++++ +G ++ LKFVT CSR PLLGFK L P FCI P Sbjct: 967 NYSGGYTDEHPVIETFWKVVREFTNGQRRHLLKFVTSCSRPPLLGFKELYPAFCIHHGGP 1026
Query: 404 EDVSDDMLDRLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 E+ DRLPT++TCMNLLKLP ++ ++ +++KLLYA+ ++AGF+LS Sbjct: 1027 EE------DRLPTASTCMNLLKLPEFQDEETMRSKLLYAVESNAGFELS 1069
>tr|A8J200|A8J200_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_130629 PE=4 SV=1 Length = 399
Score = 125 bits (313), Expect = 2e-27 Identities = 63/113 (55%), Positives = 78/113 (69%), Gaps = 5/113 (4%) Frame = -1
Query: 581 YSGGYSENHPVIDMFWEIIKTLDSGLQQKFLKFVTGCSRGPLLGFKYLEPQFCIQRAAPE 402 Y+GGY +HPVI WE + + Q KFLKFVT CSR PLLGF+YLEP+ C+Q Sbjct: 293 YAGGYHPDHPVIHCLWEALASFTPEEQGKFLKFVTSCSRAPLLGFRYLEPRLCVQ----- 347
Query: 401 DVSDDMLD-----RLPTSATCMNLLKLPPYKRKDILKAKLLYAITADAGFDLS 258 +S MLD RLPT++TCMNLLKLPPY+ ++ KLLYA+T+ AGFDLS Sbjct: 348 -MSGGMLDPAATQRLPTASTCMNLLKLPPYRTVAQMREKLLYAVTSGAGFDLS 399
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