BP913393
Clone id YMU001_000029_G04
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATTCGCGGCCGCGAATGAGCATAATTCTCTTTTGACATATAGTCAAATTTAGCCAGAAAA
CACACCCTCTCAAGATACCACTTTAAGTGTTCCCTGCGGCCATACTCCACATTTTTGAGC
ATGTAATACAACCTTGCTCCTTCTCTAGACCCAAAATCCGTCTTTAAACAATCATCTGAA
CATTTAGGTGGAATAGCTACTGTTGTGAATGGTAACTTGAAAACTGCATCAATCACCTGT
GGGCACAACACAATCTTATCAGATATTGCTCCTCTGGTCTTCCTCAGCAACTCTGCCTGT
GACTTTGCATAAAAATTTCCTTTCCATTCTTTCCATGGAAACATTGCATACTCATAAAGT
CCCAACTGTTTGAGCCACTTCTCATTCTTCTCTGTATCAGCTTCCATCTCAATCTTGAGA
TCTGTGTACGGATCCATCAAACTCTGCAGCATTTTATTTGCTGACAAAGGTGGCGGTTCT
TCCTCTGAGAACTCTTCTTCTTCCTCATTTCTCACATCCACCCTCAGGTTAATTCCCTTT
CTCTTCAGCCTTGTAGCGACAAG
■■Homology search results ■■ -
sp_hit_id Q9YC00
Definition sp|Q9YC00|RNP3_AERPE Ribonuclease P protein component 3 OS=Aeropyrum pernix
Align length 67
Score (bit) 33.1
E-value 0.91
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913393|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_G04.
(547 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9YC00|RNP3_AERPE Ribonuclease P protein component 3 OS=Aerop... 33 0.91
sp|Q5F3A4|RELL1_CHICK RELT-like protein 1 OS=Gallus gallus GN=RE... 32 2.6
sp|Q98M18|Y776_RHILO UPF0283 membrane protein mlr0776 OS=Rhizobi... 31 3.4
sp|Q8TY09|PURL_METKA Phosphoribosylformylglycinamidine synthase ... 30 5.9
sp|Q5NFD4|MURB_FRATT UDP-N-acetylenolpyruvoylglucosamine reducta... 30 5.9
sp|Q9ESQ9|RFRP_RAT FMRFamide-related peptides OS=Rattus norvegic... 30 7.7

>sp|Q9YC00|RNP3_AERPE Ribonuclease P protein component 3
OS=Aeropyrum pernix GN=rnp3 PE=3 SV=2
Length = 211

Score = 33.1 bits (74), Expect = 0.91
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -1

Query: 229 CPQVIDAVFKLPFTTVAIPPKCSDDCLKTDFGSREGARLYYMLKNVEYGRREHLKWYLER 50
C +V+ +L +T VAIPP+ +D+C+ + +G Y VE R ++ E+
Sbjct: 15 CSEVLRTAGRLGYTAVAIPPESADECMSLE---GDGIPRLYRRGYVEASTRRDVRRAAEK 71

Query: 49 VCFLAKF 29
+ + F
Sbjct: 72 LAGVVDF 78


>sp|Q5F3A4|RELL1_CHICK RELT-like protein 1 OS=Gallus gallus GN=RELL1
PE=2 SV=1
Length = 288

Score = 31.6 bits (70), Expect = 2.6
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3

Query: 114 NLAPSLDPKSVFKQSSEHLGGIATVVNGNLKTASITCGHN 233
++APSL P +V+ + LG + + + +L T ++T G+N
Sbjct: 11 SIAPSLGPTAVWLGNRSDLGDVQALASRDLPTTTVTAGNN 50


>sp|Q98M18|Y776_RHILO UPF0283 membrane protein mlr0776 OS=Rhizobium
loti GN=mlr0776 PE=3 SV=1
Length = 361

Score = 31.2 bits (69), Expect = 3.4
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -1

Query: 283 QAELLRKTRGAISDKIVLCPQVIDAVFKLPFTTVAIPPKCSDDCLKTDFGS 131
QAEL RK RG +D ++ P +D VF P A PP + ++ FGS
Sbjct: 27 QAELSRKPRGLKTDVALVIPAEVD-VFDEPDIVAAEPPPAAAPRKRSLFGS 76


>sp|Q8TY09|PURL_METKA Phosphoribosylformylglycinamidine synthase II
OS=Methanopyrus kandleri GN=purL PE=3 SV=1
Length = 724

Score = 30.4 bits (67), Expect = 5.9
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1

Query: 187 TVAIPPKCSDDCLKTDFGSREGARLYYMLK 98
TV P C DCL +FGS E R+YY L+
Sbjct: 470 TVGAEPLCLVDCL--NFGSPENPRVYYQLR 497


>sp|Q5NFD4|MURB_FRATT UDP-N-acetylenolpyruvoylglucosamine reductase
OS=Francisella tularensis subsp. tularensis GN=murB PE=3
SV=1
Length = 282

Score = 30.4 bits (67), Expect = 5.9
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Frame = -1

Query: 109 YMLKNVEYGRREHLKWYLERVCFLA---KFDYMSKE 11
Y+ K++EYG R + Y++ +C L+ +F+Y SK+
Sbjct: 147 YLKKDIEYGYRYSIFKYMKDICILSAEFEFEYKSKQ 182


>sp|Q9ESQ9|RFRP_RAT FMRFamide-related peptides OS=Rattus norvegicus
GN=Npvf PE=1 SV=1
Length = 203

Score = 30.0 bits (66), Expect = 7.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1

Query: 166 CSDDCLKTDFGSREGARLYYMLKNVEYGRREHLKWYLERVCFLAKFD 26
CSD+ + F S+EG YY L+ + G +E + E + AK D
Sbjct: 26 CSDELMMPHFHSKEGYGKYYQLRGIPKGVKERSVTFQELKDWGAKKD 72


tr_hit_id B6KPM7
Definition tr|B6KPM7|B6KPM7_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49
Align length 55
Score (bit) 34.3
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913393|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_G04.
(547 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6KPM7|B6KPM7_TOXGO Putative uncharacterized protein OS=Toxop... 34 4.4
tr|O26997|O26997_METTH Putative uncharacterized protein OS=Metha... 34 5.8
tr|A9SA81|A9SA81_PHYPA Predicted protein OS=Physcomitrella paten... 33 7.5
tr|Q1QHN7|Q1QHN7_NITHX Transketolase OS=Nitrobacter hamburgensis... 33 9.8

>tr|B6KPM7|B6KPM7_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_120420 PE=4 SV=1
Length = 542

Score = 34.3 bits (77), Expect = 4.4
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +2

Query: 263 LPQQLCL*LCIKISFPFF-----PWKHCILIKSQLFEPLLILLCISFHLNLEICV 412
LP LCL LC+ SF P C+ + + LF + +C+ L L +C+
Sbjct: 251 LPLSLCLSLCLPASFSLLVSLCLPLSRCLTLSASLFLSACLSVCLPLSLCLSLCL 305


>tr|O26997|O26997_METTH Putative uncharacterized protein
OS=Methanobacterium thermoautotrophicum GN=MTH912 PE=4
SV=1
Length = 521

Score = 33.9 bits (76), Expect = 5.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1

Query: 433 LQSLMDPYTDLKIEMEADTEKNEKWLKQLGLYEYAMF 323
++S +P+ + EME D E+ WL+ G+Y+Y F
Sbjct: 439 IKSKTEPFNE---EMEIDAERESNWLRHFGIYQYRRF 472


>tr|A9SA81|A9SA81_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_76639 PE=4 SV=1
Length = 1676

Score = 33.5 bits (75), Expect = 7.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2

Query: 326 HCILIKSQLFEPLLILLCISFHLNLEICVRIHQTLQHFI 442
HC+LI + E +I +CI HL ++ +IH T Q F+
Sbjct: 1090 HCMLIPERNGEDWIIRVCIQEHLGIDFKNKIHLTFQDFM 1128


>tr|Q1QHN7|Q1QHN7_NITHX Transketolase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=Nham_3531 PE=4 SV=1
Length = 678

Score = 33.1 bits (74), Expect = 9.8
Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -1

Query: 316 KEWKGNFYAKSQAELLRKTRGAISDKIVLCPQVIDAVF-KLPFTTVAIPP 170
KEW+ F AKS+AE TR AI K PQ +D V KL VA PP
Sbjct: 319 KEWRARFAAKSEAERGEFTRRAIDRK---PPQNLDEVIRKLKDKLVAEPP 365