BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913394|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_G05.
         (379 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P54704|SP85_DICDI Spore coat protein SP85 OS=Dictyostelium di...    31   1.7  
sp|P0A4K5|PMRA_STRR6 Multi-drug resistance efflux pump pmrA OS=S...    30   3.7  
sp|P0A4K4|PMRA_STRPN Multi-drug resistance efflux pump pmrA OS=S...    30   3.7  
sp|Q9BYR4|KRA43_HUMAN Keratin-associated protein 4-3 OS=Homo sap...    29   6.3  

>sp|P54704|SP85_DICDI Spore coat protein SP85 OS=Dictyostelium
           discoideum GN=pspB PE=1 SV=2
          Length = 532

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 197 HKWICTNAESPLKRGFHQWTFYDNTG 120
           H +   NA  P+  GFH W F DN+G
Sbjct: 41  HDFWVQNASLPVFYGFHDWNFQDNSG 66


>sp|P0A4K5|PMRA_STRR6 Multi-drug resistance efflux pump pmrA
           OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
           GN=pmrA PE=3 SV=1
          Length = 399

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 188 ICTNAESPLKRGFHQWTFYDNTGSLRSGVKGFV 90
           +C NA SPL+ G +++ F   TG+L  GV   +
Sbjct: 296 LCANASSPLQLGLYRFLFGLGTGALIPGVNALL 328


>sp|P0A4K4|PMRA_STRPN Multi-drug resistance efflux pump pmrA
           OS=Streptococcus pneumoniae GN=pmrA PE=3 SV=1
          Length = 399

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 188 ICTNAESPLKRGFHQWTFYDNTGSLRSGVKGFV 90
           +C NA SPL+ G +++ F   TG+L  GV   +
Sbjct: 296 LCANASSPLQLGLYRFLFGLGTGALIPGVNALL 328


>sp|Q9BYR4|KRA43_HUMAN Keratin-associated protein 4-3 OS=Homo
           sapiens GN=KRTAP4-3 PE=2 SV=2
          Length = 195

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
 Frame = -1

Query: 325 MGSCWASKACE*EACEPPLCIS---HPHCII 242
           + SC+  + C+   C P  CIS   HP C +
Sbjct: 136 ISSCYRPQCCQPSCCRPACCISSCCHPSCCV 166

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913394|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_G05.
         (379 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2T6R4|Q2T6R4_BURTA Glycogen operon protein GlgX OS=Burkholde...    33   7.0  
tr|Q8TRS1|Q8TRS1_METAC Carbonate dehydratase OS=Methanosarcina a...    33   7.0  
tr|Q2QRR1|Q2QRR1_ORYSJ Retrotransposon protein, putative, Ty3-gy...    33   9.1  
tr|A9I6H8|A9I6H8_BORPD Probable aldehyde dehydrogenase OS=Bordet...    33   9.2  

>tr|Q2T6R4|Q2T6R4_BURTA Glycogen operon protein GlgX OS=Burkholderia
           thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
           CIP 106301) GN=BTH_II0938 PE=4 SV=1
          Length = 1342

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 165 WALSISTYPFVPPRTYILVDQTTVSHMIQCGCDIHNGGSQASYSHAFEAQQ 317
           WALS+ TY     R++ + D   ++HMI     +   G Q+S  HA    Q
Sbjct: 800 WALSVQTYGLRSARSWGIGDFDDLAHMIDVAARLGAAGVQSSPVHALSLSQ 850


>tr|Q8TRS1|Q8TRS1_METAC Carbonate dehydratase OS=Methanosarcina
           acetivorans GN=camH PE=4 SV=1
          Length = 181

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +3

Query: 171 LSISTYPFVPPRTYILVDQTTVSHMIQCGCDIHNGGSQASYSHAFEAQQLPMRNNS-RNS 347
           +SI+ Y FV P   +  D+   S  +Q GC++ +     S SH   +  L  +N S  +S
Sbjct: 29  ISIADYVFVGPNAVLRADEPGSSITVQSGCNVQDNVVVHSLSH---SDVLVGKNTSLAHS 85

Query: 348 AGIHELCKLG 377
             +H  C++G
Sbjct: 86  CIVHGPCRIG 95


>tr|Q2QRR1|Q2QRR1_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os12g26700 PE=4 SV=1
          Length = 159

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -2

Query: 123 RKFKVGCERICFQI-LLSVKSMFTSECCEV 37
           +K K GCE +   + L+++K  FTS CCE+
Sbjct: 104 KKHKAGCEHMVLMVVLMTIKDRFTSYCCEM 133


>tr|A9I6H8|A9I6H8_BORPD Probable aldehyde dehydrogenase
           OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 /
           CCUG 43448) GN=Bpet3961 PE=4 SV=1
          Length = 719

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +3

Query: 222 DQTTVSHMIQCGCDIHNGGSQASYSHAFEAQQLPMRNNSRNSAGIHELC 368
           +Q  V H+   GC  HNG   A++  A+ A+Q P R+     +   ELC
Sbjct: 355 EQIIVEHVPGAGCYGHNGADDAAFDAAWLARQAPGRHVRVQWSRADELC 403