BP913396 |
Clone id |
YMU001_000029_G07 |
Library |
YMU01 |
Length |
486 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_G07. |
Accession |
BP913396 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1156Contig1 |
Sequence |
GAAAGGATGCAGCTACTATCACCCACTTGCTTGCATCCCCTAAATCTCCCCACTGAGGTA TAAAATGCTCAGTCAGCACCAAAGCCTTCTGCAAGGAAACAAAATGCACATCAACTCTAT GCTCATAGAATCTGTAACCACCAAACAGGCCCACGTAATCTCTATCAACTCCACTGTCCT CATCAGAGTCATCCTCTTCGTTCAAATGTGGACTTCTATCTTGCCCACCACAAAAACGAT AGAGCACGCGAACTGCTAATGGGAGCTTCCAACCAAGCTGCCCCTCAAAATTGTTGAGGT CTTCTTCTGAAACACCTGGCCGAAGTGAGTGAGCAATTTCTGGATAGTTAATAGATGTCC AATCCCTCAGAGAATCCCAACACCTTTTTGCTCGAACAACGAAAGACCGTGGATACATAC GAAAATTCATGCACCAGAGGTTGTAAGCCTCCTTGTAGGAAGGGCAGATATTTCCGTGAT GATCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6BJY4 |
Definition |
sp|Q6BJY4|SMI2_DEBHA KNR4/SMI1 homolog 2 OS=Debaryomyces hansenii |
Align length |
56 |
Score (bit) |
48.1 |
E-value |
2.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LND7 |
Definition |
tr|Q9LND7|Q9LND7_ARATH T21E18.16 protein (Putative uncharacterized protein At1g06110) (At1g06110/T21E18_13) OS=Arabidopsis thaliana |
Align length |
162 |
Score (bit) |
120.0 |
E-value |
3.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913396|Adiantum capillus-veneris mRNA, clone: YMU001_000029_G07. (486 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LND7|Q9LND7_ARATH T21E18.16 protein (Putative uncharacteriz... 120 3e-26 tr|B2LUR0|B2LUR0_MALDO F-box-containing protein 2 OS=Malus domes... 117 2e-25 tr|B7FIW9|B7FIW9_MEDTR Putative uncharacterized protein OS=Medic... 117 3e-25 tr|Q53LT0|Q53LT0_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 112 7e-24 tr|Q0ITE4|Q0ITE4_ORYSJ Os11g0265200 protein OS=Oryza sativa subs... 112 7e-24 tr|B8BJY9|B8BJY9_ORYSI Putative uncharacterized protein OS=Oryza... 112 7e-24 tr|A7QYR3|A7QYR3_VITVI Chromosome chr5 scaffold_253, whole genom... 110 3e-23 tr|B4FWF3|B4FWF3_MAIZE Putative uncharacterized protein OS=Zea m... 108 1e-22 tr|B4FTG8|B4FTG8_MAIZE Putative uncharacterized protein OS=Zea m... 108 1e-22 tr|Q53LS9|Q53LS9_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 107 2e-22 tr|A3CAB3|A3CAB3_ORYSJ Putative uncharacterized protein OS=Oryza... 105 8e-22 tr|A7QYR0|A7QYR0_VITVI Chromosome chr5 scaffold_253, whole genom... 94 3e-18 tr|A9TRI3|A9TRI3_PHYPA Predicted protein OS=Physcomitrella paten... 92 1e-17 tr|Q53LT6|Q53LT6_ORYSJ F-box domain, putative OS=Oryza sativa su... 78 2e-13 tr|Q2R7K1|Q2R7K1_ORYSJ F-box domain containing protein, expresse... 78 2e-13 tr|A2ZD66|A2ZD66_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13 tr|A8JFX6|A8JFX6_CHLRE Predicted protein OS=Chlamydomonas reinha... 65 1e-09 tr|A8NH18|A8NH18_COPC7 Putative uncharacterized protein OS=Copri... 49 1e-04 tr|B2GUN1|B2GUN1_XENTR LOC100158620 protein (Fragment) OS=Xenopu... 48 2e-04 tr|Q501X3|Q501X3_DANRE F-box protein 3 OS=Danio rerio GN=fbxo3 P... 48 3e-04 tr|Q9H0V2|Q9H0V2_HUMAN Putative uncharacterized protein DKFZp564... 48 3e-04 tr|B0D3A0|B0D3A0_LACBS Predicted protein OS=Laccaria bicolor (st... 48 3e-04 tr|A6H7H7|A6H7H7_BOVIN FBXO3 protein OS=Bos taurus GN=FBXO3 PE=2... 47 6e-04 tr|Q86X90|Q86X90_HUMAN F-box protein 3 OS=Homo sapiens GN=FBXO3 ... 47 6e-04 tr|Q59GS0|Q59GS0_HUMAN F-box only protein 3 isoform 1 variant (F... 47 6e-04 tr|B4E3U2|B4E3U2_HUMAN cDNA FLJ59154, highly similar to F-box on... 47 6e-04 tr|B3KY16|B3KY16_HUMAN cDNA FLJ46597 fis, clone THYMU3046360, hi... 47 6e-04 tr|Q6DCC4|Q6DCC4_XENLA Fbxo3-prov protein OS=Xenopus laevis GN=f... 45 0.001 tr|Q52KV8|Q52KV8_XENLA MGC115036 protein OS=Xenopus laevis GN=MG... 45 0.001 tr|Q4PAY0|Q4PAY0_USTMA Putative uncharacterized protein OS=Ustil... 45 0.001
>tr|Q9LND7|Q9LND7_ARATH T21E18.16 protein (Putative uncharacterized protein At1g06110) (At1g06110/T21E18_13) OS=Arabidopsis thaliana GN=At1g06110 PE=1 SV=1 Length = 436
Score = 120 bits (302), Expect = 3e-26 Identities = 67/162 (41%), Positives = 98/162 (60%), Gaps = 2/162 (1%) Frame = -3
Query: 484 DHHGNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSE 305 D HG+ PS+K AY LW +FRMYP + V R + CWD+L+ W ++N+PE +LR GV+E Sbjct: 58 DPHGDPAPSFKRAYQLWRESFRMYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTE 117
Query: 304 EDLNNFEGQLGWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFY 125 +DL FE L KLPL R+LYRF GQ+ S +G+D +GL GGY Y Sbjct: 118 DDLQEFETSLKVKLPLPTRLLYRFVDGQELS----------SPNGLDGS-LGLIGGYSAY 166
Query: 124 EHRVDVHFVSLQKALVLTEHFIPQWGDLGDASK--WVIVAAS 5 H V+V+ + L++ + T+ + DLG +S+ +++AAS Sbjct: 167 SHDVNVYLLPLKEVMRETKESFMR--DLGFSSRLDLIVMAAS 206
>tr|B2LUR0|B2LUR0_MALDO F-box-containing protein 2 OS=Malus domestica PE=2 SV=1 Length = 443
Score = 117 bits (294), Expect = 2e-25 Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 1/161 (0%) Frame = -3
Query: 484 DHHGNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSE 305 D GN+ PS+KE+Y LW + F+MYP S V R KRCWD +R+W +IN+PE +L+ G SE Sbjct: 58 DPLGNLAPSFKESYQLWRVTFKMYPWSLVKRVKRCWDKIRNWLTINFPEAVSTLKKGASE 117
Query: 304 EDLNNFEGQLGWKLPLAVRVLYRFCGGQD-RSPHLNXXXXXXXXSGVDRDYVGLFGGYRF 128 D+ E L KLPL R+LYRF GQ H +GL GGY F Sbjct: 118 ADIQEVEKILKVKLPLPTRILYRFHNGQAFEEKHFQNNLVGCP--------LGLIGGYAF 169
Query: 127 YEHRVDVHFVSLQKALVLTEHFIPQWGDLGDASKWVIVAAS 5 Y+ V V+ + L++ ++ T + G G S++V+VA S Sbjct: 170 YDQLVTVYLMPLRQVVLETMKIRRKLGFTG-RSEYVVVADS 209
>tr|B7FIW9|B7FIW9_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 318
Score = 117 bits (293), Expect = 3e-25 Identities = 64/160 (40%), Positives = 88/160 (55%) Frame = -3
Query: 484 DHHGNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSE 305 DH GN PS+KEAY W F MYP S V R KRCWD+++ W + N+PE +L G SE Sbjct: 58 DHLGNPTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEARETLCEGASE 117
Query: 304 EDLNNFEGQLGWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFY 125 ++ E L KLPL R+LYRF GQ+ H + +G+ GGY FY Sbjct: 118 VEIQELEDVLNVKLPLPTRILYRFHNGQEIEKH-------DHDTSTSDISLGIIGGYSFY 170
Query: 124 EHRVDVHFVSLQKALVLTEHFIPQWGDLGDASKWVIVAAS 5 +H V+V+ + + + + T+ G L SK+V+VAAS Sbjct: 171 DHFVNVYLLPISQVIQETQQISHNLGFL-RRSKYVLVAAS 209
>tr|Q53LT0|Q53LT0_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g16390 PE=4 SV=1 Length = 457
Score = 112 bits (281), Expect = 7e-24 Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Frame = -3
Query: 475 GNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDL 296 G PS+K+AY +W +F MYP V R K W SL+ W S N+PE +L GVSE + Sbjct: 78 GRALPSFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQI 137
Query: 295 NNFEGQLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFYEH 119 + E LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H Sbjct: 138 QSAEDDLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDH 189
Query: 118 RVDVHFVSLQKALVLTEHFIPQWGDLG--DASKWVIVAASF 2 ++VH L++ + T+ F ++ D G + + +IVA S+ Sbjct: 190 LINVHLSPLEQIVEETKEFYREFYDQGVFNMTNLIIVATSW 230
>tr|Q0ITE4|Q0ITE4_ORYSJ Os11g0265200 protein OS=Oryza sativa subsp. japonica GN=Os11g0265200 PE=4 SV=1 Length = 495
Score = 112 bits (281), Expect = 7e-24 Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Frame = -3
Query: 475 GNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDL 296 G PS+K+AY +W +F MYP V R K W SL+ W S N+PE +L GVSE + Sbjct: 116 GRALPSFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQI 175
Query: 295 NNFEGQLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFYEH 119 + E LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H Sbjct: 176 QSAEDDLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDH 227
Query: 118 RVDVHFVSLQKALVLTEHFIPQWGDLG--DASKWVIVAASF 2 ++VH L++ + T+ F ++ D G + + +IVA S+ Sbjct: 228 LINVHLSPLEQIVEETKEFYREFYDQGVFNMTNLIIVATSW 268
>tr|B8BJY9|B8BJY9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35735 PE=4 SV=1 Length = 457
Score = 112 bits (281), Expect = 7e-24 Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Frame = -3
Query: 475 GNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDL 296 G PS+K+AY +W +F MYP V R K W SL+ W S N+PE +L GVSE + Sbjct: 78 GRALPSFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQI 137
Query: 295 NNFEGQLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFYEH 119 + E LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H Sbjct: 138 QSAEDDLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDH 189
Query: 118 RVDVHFVSLQKALVLTEHFIPQWGDLG--DASKWVIVAASF 2 ++VH L++ + T+ F ++ D G + + +IVA S+ Sbjct: 190 LINVHLSPLEQIVEETKEFYREFYDQGVFNMTNLIIVATSW 230
>tr|A7QYR3|A7QYR3_VITVI Chromosome chr5 scaffold_253, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00010297001 PE=4 SV=1 Length = 298
Score = 110 bits (275), Expect = 3e-23 Identities = 64/160 (40%), Positives = 87/160 (54%) Frame = -3
Query: 484 DHHGNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSE 305 D G PS+KE Y LW +F MYP V R KRCWD L++W S N+P+ +LR G +E Sbjct: 58 DPLGKPAPSFKETYQLWRESFGMYPWPLVKRVKRCWDRLKNWLSANFPDADATLRKGATE 117
Query: 304 EDLNNFEGQLGWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFY 125 ++ E L KLPL R+LYRFC GQ+ L G +G+ GGY Sbjct: 118 VEIEALENILKVKLPLPTRLLYRFCDGQE----LTEEDVGGTALG---GSLGIMGGYCCN 170
Query: 124 EHRVDVHFVSLQKALVLTEHFIPQWGDLGDASKWVIVAAS 5 +H V+V + L++ ++ T+ Q G SK+VIVAAS Sbjct: 171 DHLVNVCLLPLRQVILETKEITDQLG-FSTTSKYVIVAAS 209
>tr|B4FWF3|B4FWF3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 410
Score = 108 bits (271), Expect = 1e-22 Identities = 57/161 (35%), Positives = 86/161 (53%) Frame = -3
Query: 484 DHHGNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSE 305 D G PS++ AY +W +F MYP V R ++ W S++ W S N+PE +L GVSE Sbjct: 71 DPEGRPLPSFQVAYKVWSESFGMYPLPMVKRVRQFWTSMKTWLSENFPEAYKTLCEGVSE 130
Query: 304 EDLNNFEGQLGWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFY 125 L + E LG+KLP+ ++LYRFC Q + GL GGY FY Sbjct: 131 AQLKSAEDDLGFKLPMPTKLLYRFCNAQ-------LPFSEDHDTNKSISTYGLIGGYAFY 183
Query: 124 EHRVDVHFVSLQKALVLTEHFIPQWGDLGDASKWVIVAASF 2 +H V+VH L++ + T+ F ++ D+ K+++VA S+ Sbjct: 184 DHWVNVHLSPLEQIVEETKDFYREFPDVFHGRKFIVVATSW 224
>tr|B4FTG8|B4FTG8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 449
Score = 108 bits (271), Expect = 1e-22 Identities = 57/161 (35%), Positives = 86/161 (53%) Frame = -3
Query: 484 DHHGNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSE 305 D G PS++ AY +W +F MYP V R ++ W S++ W S N+PE +L GVSE Sbjct: 71 DPEGRPLPSFQVAYKVWSESFGMYPLPMVKRVRQFWTSMKTWLSENFPEAYKTLCEGVSE 130
Query: 304 EDLNNFEGQLGWKLPLAVRVLYRFCGGQDRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFY 125 L + E LG+KLP+ ++LYRFC Q + GL GGY FY Sbjct: 131 AQLKSAEDDLGFKLPMPTKLLYRFCNAQ-------LPFSEDHDTNKSISTYGLIGGYAFY 183
Query: 124 EHRVDVHFVSLQKALVLTEHFIPQWGDLGDASKWVIVAASF 2 +H V+VH L++ + T+ F ++ D+ K+++VA S+ Sbjct: 184 DHWVNVHLSPLEQIVEETKDFYREFPDVFHGRKFIVVATSW 224
>tr|Q53LS9|Q53LS9_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g16390 PE=4 SV=1 Length = 425
Score = 107 bits (268), Expect = 2e-22 Identities = 55/139 (39%), Positives = 78/139 (56%), Gaps = 1/139 (0%) Frame = -3
Query: 475 GNICPSYKEAYNLWCMNFRMYPRSFVVRAKRCWDSLRDWTSINYPEIAHSLRPGVSEEDL 296 G PS+K+AY +W +F MYP V R K W SL+ W S N+PE +L GVSE + Sbjct: 78 GRALPSFKDAYKVWLESFGMYPLPLVRRVKIFWSSLKSWLSENFPEAHKTLNKGVSEAQI 137
Query: 295 NNFEGQLGWKLPLAVRVLYRFCGGQ-DRSPHLNXXXXXXXXSGVDRDYVGLFGGYRFYEH 119 + E LG+KLPL ++LYRFC GQ S H + ++G+ GGY FY+H Sbjct: 138 QSAEDDLGFKLPLPTKLLYRFCNGQLPLSEH--------HHENMRMAHLGIIGGYVFYDH 189
Query: 118 RVDVHFVSLQKALVLTEHF 62 ++VH L++ + T+ F Sbjct: 190 LINVHLSPLEQIVEETKEF 208
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