BP913401
Clone id YMU001_000029_H01
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_H01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTGTTTTTTTTGAAGGTTCTTCTTTAAAGCCAAAAAGAGCTGCTAAGCATCATAC
AGACAAGAAGCTTCTTGTCATACAAACGGCAACTTATGACAGCAACTTCATACAATCCAA
AACACCCAACAAGTCAATCATAAGACTCTTGGCTTTGCATCCTTGCTATGGTGTTGCTTT
GATTTGACAGAAGACTTCTTAGGCTGTACACCATGATTTCGCTTCGGAGACATGGCTTTG
CTCTTTCTCCCTTTTCCACTTGAAAGTGATCTCGCCAAGCGGAATCCGCTGGGTGATCCT
ATCCGTGTATGTACGACTTTGTGGCCATTCAAATTCTCTGCACTAACCTTGGAACTTTTA
CACTTCTGAATGTGTGTTATGGCAGTGCGATCTGTCAGAGACGTCGTCTTTCTTGCACCA
TCATTTTGCGGCTTGTTGTCTCCACGAAGGGCAGGCTTCTTGGTTTGTCCATTCAACCAC
TCATCCAACCAGATCCAAACCCAGGTTGAATTGTCCAGCTCATAGTCAAACAAC
■■Homology search results ■■ -
sp_hit_id Q32SG6
Definition sp|Q32SG6|HIRA_MAIZE Protein HIRA OS=Zea mays
Align length 67
Score (bit) 33.1
E-value 0.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913401|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_H01.
(518 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q32SG6|HIRA_MAIZE Protein HIRA OS=Zea mays PE=1 SV=1 33 0.80
sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 33 1.0
sp|Q0AHZ3|HRCA_NITEC Heat-inducible transcription repressor hrcA... 30 6.8
sp|P16090|ENV_FIVPE Envelope glycoprotein gp150 OS=Feline immuno... 25 7.7

>sp|Q32SG6|HIRA_MAIZE Protein HIRA OS=Zea mays PE=1 SV=1
Length = 964

Score = 33.1 bits (74), Expect = 0.80
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -2

Query: 472 LDEWLNGQTKKPALRGDNKPQNDGARKTTSLTDRTAITHIQKCKSSKVSAENLNGHKVVH 293
LD+ +NG KP+ ++ N G + TS+T R IT + + A N + H
Sbjct: 520 LDQRMNGT--KPSYGSNSNSNNCGVKDRTSVTARANITESLVIQKASAGAGNDGRLSIEH 577

Query: 292 TRIGSPS 272
TR +PS
Sbjct: 578 TRSMAPS 584


>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana
GN=IQD1 PE=1 SV=1
Length = 454

Score = 32.7 bits (73), Expect = 1.0
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2

Query: 496 NSTWVWIWLDEWLNGQTKKPALRGDNKPQNDGA 398
N TW W WL+ W+ G+ + + + N ND +
Sbjct: 255 NPTWGWSWLERWMAGRPWESSEKEQNTTNNDNS 287


>sp|Q0AHZ3|HRCA_NITEC Heat-inducible transcription repressor hrcA
OS=Nitrosomonas eutropha (strain C91) GN=hrcA PE=3 SV=1
Length = 338

Score = 30.0 bits (66), Expect = 6.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1

Query: 349 SECVLWQCDLSETSSFLHHHFAACCLHE 432
+E V Q DL E +FL+ H+A C L E
Sbjct: 164 TETVYNQSDLIEAGNFLNQHYAGCALEE 191


>sp|P16090|ENV_FIVPE Envelope glycoprotein gp150 OS=Feline
immunodeficiency virus (isolate Petaluma) GN=env PE=3
SV=2
Length = 856

Score = 25.0 bits (53), Expect(2) = 7.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1

Query: 437 CPSWRQQAAK*WCKKDDVSDRSHCHNTHSE 348
C W Q A CK ++ + HC T S+
Sbjct: 354 CGWWNQMAYYNSCKWEEAKVKFHCQRTQSQ 383



Score = 22.7 bits (47), Expect(2) = 7.7
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = -3

Query: 261 WRDHFQVEKGERAKPCLRSEIMVYSLRS 178
WR F+ +K + + PC ++ + +++RS
Sbjct: 402 WRPDFKSKKVKISLPCNSTKNLTFAMRS 429


tr_hit_id B6TIB2
Definition tr|B6TIB2|B6TIB2_MAIZE Calmodulin binding protein OS=Zea mays
Align length 73
Score (bit) 35.8
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913401|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_H01.
(518 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6TIB2|B6TIB2_MAIZE Calmodulin binding protein OS=Zea mays PE... 36 1.3
tr|B0CXA6|B0CXA6_LACBS Predicted protein OS=Laccaria bicolor (st... 35 1.7
tr|Q5VMB6|Q5VMB6_ORYSJ Os06g0155300 protein OS=Oryza sativa subs... 35 2.9
tr|B8B304|B8B304_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.9
tr|Q0WNP8|Q0WNP8_ARATH Putative SF16 protein (Helianthus annuus)... 34 3.8
tr|Q93ZH7|Q93ZH7_ARATH AT5g03040/F15A17_70 OS=Arabidopsis thalia... 33 8.5
tr|O22952|O22952_ARATH Putative SF16 protein (Helianthus annuus)... 33 8.5
tr|Q9U0I1|Q9U0I1_PLAF7 Hypothetical GTP-binding protein OS=Plasm... 33 8.5
tr|B3RPJ6|B3RPJ6_TRIAD Putative uncharacterized protein OS=Trich... 33 8.5

>tr|B6TIB2|B6TIB2_MAIZE Calmodulin binding protein OS=Zea mays PE=2
SV=1
Length = 335

Score = 35.8 bits (81), Expect = 1.3
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = -2

Query: 514 FDYELDNSTWVWIWLDEWLNGQTKKPALRGDNKPQNDGARKTTSLTDRTAITHIQKCKSS 335
F YE+ W W W+D W+ + +P R P+N +K + + T K + S
Sbjct: 199 FSYEVGKGGWGWSWMDRWIAARPWEP--RSMVHPEN--PKKAQAKKENTTNPSALKLQGS 254

Query: 334 KVSAENLNGHKVV 296
+ N+N K +
Sbjct: 255 ITLSNNINDRKTL 267


>tr|B0CXA6|B0CXA6_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_292453 PE=4 SV=1
Length = 699

Score = 35.4 bits (80), Expect = 1.7
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -2

Query: 466 EWLNGQTKKPALRGDNKPQNDGARKTTSLTDRTAITHIQKCKSSKVSAEN----LNGHKV 299
+WL Q P L KP +G TT+ T ++ + ++K S S L V
Sbjct: 578 DWLIDQIPAPQLLVGGKPSKNGGTTTTAKTVQSKVVEVEKDSSGNESTTTTTRVLAERMV 637

Query: 298 VHTRIGSPSG 269
VHT GS +G
Sbjct: 638 VHTVAGSANG 647


>tr|Q5VMB6|Q5VMB6_ORYSJ Os06g0155300 protein OS=Oryza sativa subsp.
japonica GN=P0046E09.3 PE=2 SV=1
Length = 353

Score = 34.7 bits (78), Expect = 2.9
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -2

Query: 514 FDYELDNSTWVWIWLDEWLNGQTKKP-ALRGDNKPQNDGARKTTSLTDRTAITHIQKCKS 338
F+YE+ W W W+D W+ + +P +L + A+K + T+ +A+ K +
Sbjct: 199 FNYEVGKGGWGWSWMDRWIAARPWEPRSLVHPENLKKGQAKKENASTNPSAL----KLQG 254

Query: 337 SKVSAENLNGHKVVHTRIGSPS 272
S + N+N K + SPS
Sbjct: 255 SISLSNNINDRKAPKKK-SSPS 275


>tr|B8B304|B8B304_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_21733 PE=4 SV=1
Length = 334

Score = 34.7 bits (78), Expect = 2.9
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -2

Query: 514 FDYELDNSTWVWIWLDEWLNGQTKKP-ALRGDNKPQNDGARKTTSLTDRTAITHIQKCKS 338
F+YE+ W W W+D W+ + +P +L + A+K + T+ +A+ K +
Sbjct: 180 FNYEVGKGGWGWSWMDRWIAARPWEPRSLVHPENLKKGQAKKENASTNPSAL----KLQG 235

Query: 337 SKVSAENLNGHKVVHTRIGSPS 272
S + N+N K + SPS
Sbjct: 236 SISLSNNINDRKAPKKK-SSPS 256


>tr|Q0WNP8|Q0WNP8_ARATH Putative SF16 protein (Helianthus annuus)
OS=Arabidopsis thaliana GN=At2g33990 PE=2 SV=1
Length = 263

Score = 34.3 bits (77), Expect = 3.8
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Frame = -2

Query: 517 LFDYELDNSTWVWIWLDEWLNGQ---------TKKPALRGDNKPQNDGARKTTSLTDRTA 365
L YEL N+ W W W + W++ + KKP + N A++T SL+ A
Sbjct: 185 LGSYELGNTNWGWSWKERWISARPWEVRYSVTPKKP--KSSKTDSNSPAKRTVSLSSVPA 242

Query: 364 IT 359
T
Sbjct: 243 KT 244


>tr|Q93ZH7|Q93ZH7_ARATH AT5g03040/F15A17_70 OS=Arabidopsis thaliana
PE=2 SV=1
Length = 461

Score = 33.1 bits (74), Expect = 8.5
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -2

Query: 496 NSTWVWIWLDEWLNGQTKKPALRGDNKPQNDGARKTTSLTDR 371
N TW W WL+ W+ G+ + + + + ND A +R
Sbjct: 262 NPTWGWSWLERWMAGRPLESSEKEQSNSNNDNAASVKGSINR 303


>tr|O22952|O22952_ARATH Putative SF16 protein (Helianthus annuus)
OS=Arabidopsis thaliana GN=At2g33990 PE=2 SV=1
Length = 249

Score = 33.1 bits (74), Expect = 8.5
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Frame = -2

Query: 514 FDYELDNSTWVWIWLDEWLNGQ---------TKKPALRGDNKPQNDGARKTTSLTDRTAI 362
F ++L N+ W W W + W++ + KKP + N A++T SL+ A
Sbjct: 172 FSHQLGNTNWGWSWKERWISARPWEVRYSVTPKKP--KSSKTDSNSPAKRTVSLSSVPAK 229

Query: 361 T 359
T
Sbjct: 230 T 230


>tr|Q9U0I1|Q9U0I1_PLAF7 Hypothetical GTP-binding protein
OS=Plasmodium falciparum (isolate 3D7) GN=PFD0530c PE=4
SV=1
Length = 904

Score = 33.1 bits (74), Expect = 8.5
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2

Query: 427 GDNKPQNDGARKTTSLTDRTAITHIQKCKSSKVSAENLNGHKVVHTR 287
GD+ QN+ A KT ++TD+ THI + N+N H+ +H +
Sbjct: 312 GDSVHQNEDATKTNNVTDKDNRTHIDDSNQN----NNINYHEDIHNK 354


>tr|B3RPJ6|B3RPJ6_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_53564 PE=4 SV=1
Length = 447

Score = 33.1 bits (74), Expect = 8.5
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +1

Query: 217 WLCSFSLFHLKVISPSGIRWVILSVYVRLCGHSNSLH*PWNFYTSECVLWQCDLS-ETSS 393
++ S S F + +I +R + L +Y+++ N + PW+ S W C L + +
Sbjct: 59 FIASLSAFIISIIPHLLVRSIELEMYIKIHQRYNWIKLPWD---SPQTWWLCLLGVDLAY 115

Query: 394 FLHHHFAACCLHEGQASWFVHSTTHPTR 477
+ H FA HE W H H ++
Sbjct: 116 YFVHRFA----HEINLFWIAHQVHHSSQ 139