BP913407 |
Clone id |
YMU001_000029_H07 |
Library |
YMU01 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_H07. |
Accession |
BP913407 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL10Contig1 |
Sequence |
CAGGTTTATTAGCTTTGCGTCCTTGAACCGATAACCACCTTTCGGCTAACCTAGCCTCCT CCGTCCCTCGGGACCAACAAGGGGCAGTACGGGAATATTAACCCGTTGTCCATCAACTAC GCCTCTCGGCCTGATCTTAGGAACTGACTCACCCTCCGTGGACGAACCTTGCTGAGGAAC CCTTACGTTTTCGGGGCATTGGATTCTCACCAATGTATTCGTTACTCAAGCCGACATTCT CGCTTCCGCTTCGTCCACACCTGCTCGCACTGGTGCTTCCATCTGGGGCGGAACGCTCCC CTACCGATGTGTTTTGACATCCCACAGCTTCGGCAGACCGCTTAGTCCCGCTCATCTTCG GCGCAAGAGCGCTTGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGG CAAACCTCCTGGCTGTCTTTGCACTCCTACCTCCTTTACCACTGAGCGGTCATTTAGGGG CCTTTAGCTGGTGATCTGGGCTGTTCCCCTCTCGACGGTGAAGCTTATCCCTCATCGTCT CACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P91599 |
Definition |
sp|P91599|LIN28_CAERE Protein lin-28 OS=Caenorhabditis remanei |
Align length |
48 |
Score (bit) |
32.0 |
E-value |
2.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9RXQ4 |
Definition |
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans |
Align length |
134 |
Score (bit) |
112.0 |
E-value |
1.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913407|Adiantum capillus-veneris mRNA, clone: YMU001_000029_H07. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deino... 112 1e-23 tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deino... 108 2e-22 tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69 ... 99 1e-19 tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa s... 62 8e-16 tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkh... 86 2e-15 tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medic... 59 3e-14 tr|Q6AV58|Q6AV58_ORYSJ Putative uncharacterized protein OSJNBb01... 62 3e-13 tr|A7QEC9|A7QEC9_VITVI Chromosome chr1 scaffold_84, whole genome... 71 4e-11 tr|A7QYC6|A7QYC6_VITVI Chromosome undetermined scaffold_244, who... 65 3e-09 tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea ... 63 9e-09 tr|B1N6J8|B1N6J8_9PROT Putative uncharacterized protein OS=uncul... 61 3e-08 tr|Q0JIM3|Q0JIM3_ORYSJ Photosystem I P700 chlorophyll A apoprote... 57 8e-07 tr|B0TIE5|B0TIE5_HELMI Putative uncharacterized protein OS=Helio... 50 6e-05 tr|A8R9Q0|A8R9Q0_9FIRM Putative uncharacterized protein OS=Eubac... 49 2e-04 tr|A8R9P7|A8R9P7_9FIRM Putative uncharacterized protein OS=Eubac... 47 5e-04 tr|A1XNB2|A1XNB2_VICSA Putative cysteine synthase Voas-tl5 OS=Vi... 46 0.001 tr|B0MGK2|B0MGK2_9FIRM Putative uncharacterized protein OS=Anaer... 38 0.001 tr|B7R8W2|B7R8W2_9THEO Putative uncharacterized protein OS=Carbo... 44 0.007 tr|B0PCK9|B0PCK9_9FIRM Putative uncharacterized protein OS=Anaer... 42 0.016 tr|B0P654|B0P654_9FIRM Putative uncharacterized protein OS=Anaer... 42 0.016 tr|B0PBI2|B0PBI2_9FIRM Putative uncharacterized protein OS=Anaer... 42 0.028 tr|A1HM07|A1HM07_9FIRM Putative uncharacterized protein OS=Therm... 41 0.046 tr|A5Z498|A5Z498_9FIRM Putative uncharacterized protein OS=Eubac... 40 0.062 tr|Q3BKI0|Q3BKI0_9PROT Putative uncharacterized protein OS=Magne... 39 0.14 tr|A5KRD2|A5KRD2_9FIRM Putative uncharacterized protein OS=Rumin... 37 0.52 tr|A5KP23|A5KP23_9FIRM Putative uncharacterized protein OS=Rumin... 37 0.52 tr|A5KL04|A5KL04_9FIRM Putative uncharacterized protein OS=Rumin... 37 0.52 tr|A5HAX0|A5HAX0_9CREN Putative amoA protein (Fragment) OS=uncul... 37 0.52 tr|Q4Q6C1|Q4Q6C1_LEIMA Putative uncharacterized protein OS=Leish... 35 2.0 tr|B0MI56|B0MI56_9FIRM Putative uncharacterized protein (Fragmen... 35 3.4
>tr|Q9RXQ4|Q9RXQ4_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans GN=DR_0254 PE=4 SV=1 Length = 139
Score = 112 bits (281), Expect = 1e-23 Identities = 68/134 (50%), Positives = 76/134 (56%), Gaps = 3/134 (2%) Frame = +2
Query: 92 GILTRCPSTTPLGLILGTDSPSVDEPC*GTLTFSGHWILTNVFVTQADILASASSTPART 271 GILT CPS P GL LG D P D+P GTL + ILT+ VT A I S ST Sbjct: 5 GILTCCPSAAPFGLTLGPDFPWADDPSPGTLVLTAKKILTSFIVTHAGIRTSVGSTTPSG 64
Query: 272 GASIWGGTLPYRCVLT---SHSFGRPLSPAHLRRKSA*SVSYYALFQGWLLLGKPPGCLC 442 AS P R + + S + LSP H RR VSYYALF+GWLLL +PPGCLC Sbjct: 65 MASPRTERSPTRQLASRVESIASVDHLSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLC 124
Query: 443 TPTSFTTERSFRGL 484 TS TTERSFR L Sbjct: 125 DDTSLTTERSFRDL 138
>tr|Q9RS75|Q9RS75_DEIRA Putative uncharacterized protein OS=Deinococcus radiodurans GN=DR_2252 PE=4 SV=1 Length = 133
Score = 108 bits (269), Expect = 2e-22 Identities = 65/132 (49%), Positives = 74/132 (56%), Gaps = 3/132 (2%) Frame = +2
Query: 98 LTRCPSTTPLGLILGTDSPSVDEPC*GTLTFSGHWILTNVFVTQADILASASSTPARTGA 277 +T CPS P GL LG D P D+P GTL + ILT+ VT A I S ST A Sbjct: 1 MTCCPSAAPFGLTLGPDFPWADDPSPGTLVLTAKKILTSFIVTHAGIRTSVGSTTPSGMA 60
Query: 278 SIWGGTLPYRCVLT---SHSFGRPLSPAHLRRKSA*SVSYYALFQGWLLLGKPPGCLCTP 448 S P R + + S + LSP H RR VSYYALF+GWLLL +PPGCLC Sbjct: 61 SPRTERSPTRQLASRVESIASVDHLSPDHFRRIVTRPVSYYALFEGWLLLSQPPGCLCDD 120
Query: 449 TSFTTERSFRGL 484 TS TTERSFR L Sbjct: 121 TSLTTERSFRDL 132
>tr|A1IW39|A1IW39_9LAMI Putative uncharacterized protein ophh-69 (Fragment) OS=Phillyrea latifolia GN=ophh-69 PE=2 SV=1 Length = 166
Score = 99.4 bits (246), Expect = 1e-19 Identities = 50/67 (74%), Positives = 54/67 (80%) Frame = -1
Query: 352 SGTKRSAEAVGCQNTSVGERSAPDGSTSASRCGRSGSENVGLSNEYIGENPMPRKRKGSS 173 +G + AVGC+NTSVGERSA +GS AS GRSGSENVGLSN IGENPMPRK KGSS Sbjct: 100 AGDVQGCRAVGCKNTSVGERSALEGSPRASSGGRSGSENVGLSNANIGENPMPRKPKGSS 159
Query: 172 ARFVHGG 152 ARFVHGG Sbjct: 160 ARFVHGG 166
Score = 92.8 bits (229), Expect = 1e-17 Identities = 47/59 (79%), Positives = 49/59 (83%) Frame = -1
Query: 328 AVGCQNTSVGERSAPDGSTSASRCGRSGSENVGLSNEYIGENPMPRKRKGSSARFVHGG 152 AVGC+NTSVGERSA +GS S GRSGSENVGLSN IGENPMPRK KGSSA FVHGG Sbjct: 3 AVGCKNTSVGERSALEGSPRVSSGGRSGSENVGLSNANIGENPMPRKPKGSSAWFVHGG 61
>tr|A6N1H4|A6N1H4_ORYSI Retrotransposon protein OS=Oryza sativa subsp. indica PE=4 SV=1 Length = 109
Score = 62.4 bits (150), Expect(2) = 8e-16 Identities = 29/31 (93%), Positives = 30/31 (96%) Frame = -2
Query: 483 RPLNDRSVVKEVGVQRQPGGLPRSSHP*KSA 391 RPLNDRSV+KEVGVQRQPGGLPRSSHP KSA Sbjct: 79 RPLNDRSVIKEVGVQRQPGGLPRSSHPLKSA 109
Score = 44.3 bits (103), Expect(2) = 8e-16 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -1
Query: 544 SETMRDKLHRREGNSPDHQLK 482 SETM DKLHRREGNSPDHQL+ Sbjct: 59 SETMGDKLHRREGNSPDHQLR 79
>tr|B3D9S7|B3D9S7_BURM1 Putative uncharacterized protein OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=BMULJ_05092 PE=4 SV=1 Length = 123
Score = 85.5 bits (210), Expect = 2e-15 Identities = 52/123 (42%), Positives = 62/123 (50%), Gaps = 1/123 (0%) Frame = +2
Query: 98 LTRCPSTTPLGLILGTDSPSVDEPC*GTLTFSGHWILTNVFVTQADILASASSTPARTGA 277 +T PS T L LG DSP DE C G L + T T I S +S+ Sbjct: 1 MTCFPSATHFCLALGADSPYADERCVGNLGLTARGPFTPFIATHVSIRTSDTSSTLYKAP 60
Query: 278 SIWGGTLPYR-CVLTSHSFGRPLSPAHLRRKSA*SVSYYALFQGWLLLGKPPGCLCTPTS 454 S GTL Y C S + L+P HL R++ SVSYYA F+GWLLL +PP C PTS Sbjct: 61 SQAYGTLSYHACKHASAASVYGLAPLHLPRRTTRSVSYYAFFKGWLLLSQPPDCFSLPTS 120
Query: 455 FTT 463 F T Sbjct: 121 FPT 123
>tr|B7FGU0|B7FGU0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1 Length = 102
Score = 58.9 bits (141), Expect(2) = 3e-14 Identities = 26/27 (96%), Positives = 27/27 (100%) Frame = -2
Query: 483 RPLNDRSVVKEVGVQRQPGGLPRSSHP 403 RPLNDRSV+KEVGVQRQPGGLPRSSHP Sbjct: 76 RPLNDRSVIKEVGVQRQPGGLPRSSHP 102
Score = 42.4 bits (98), Expect(2) = 3e-14 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -1
Query: 544 SETMRDKLHRREGNSPDHQLK 482 SE M DKLHRREGNSPDHQL+ Sbjct: 56 SEAMGDKLHRREGNSPDHQLR 76
>tr|Q6AV58|Q6AV58_ORYSJ Putative uncharacterized protein OSJNBb0101N11.3 OS=Oryza sativa subsp. japonica GN=OSJNBb0101N11.3 PE=4 SV=1 Length = 245
Score = 62.4 bits (150), Expect(2) = 3e-13 Identities = 29/33 (87%), Positives = 31/33 (93%) Frame = -2
Query: 141 PKIRPRGVVDGQRVNIPVLPLVGPEGRRRLG*P 43 PKIRP+GVVDGQ+VNIPVLPLVG EGRRRLG P Sbjct: 142 PKIRPKGVVDGQQVNIPVLPLVGTEGRRRLGKP 174
Score = 35.4 bits (80), Expect(2) = 3e-13 Identities = 18/31 (58%), Positives = 21/31 (67%) Frame = -1
Query: 319 CQNTSVGERSAPDGSTSASRCGRSGSENVGL 227 C+ + GERSA +GS S RSGSENVGL Sbjct: 110 CRKQAEGERSALEGSNRESGGRRSGSENVGL 140
>tr|A7QEC9|A7QEC9_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036955001 PE=4 SV=1 Length = 243
Score = 70.9 bits (172), Expect = 4e-11 Identities = 33/36 (91%), Positives = 35/36 (97%) Frame = -2
Query: 156 EGESVPKIRPRGVVDGQRVNIPVLPLVGPEGRRRLG 49 EGES PKIRP+GVVDGQ+VNIPVLPLVGPEGRRRLG Sbjct: 208 EGESGPKIRPKGVVDGQQVNIPVLPLVGPEGRRRLG 243
>tr|A7QYC6|A7QYC6_VITVI Chromosome undetermined scaffold_244, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00009678001 PE=4 SV=1 Length = 114
Score = 64.7 bits (156), Expect = 3e-09 Identities = 40/79 (50%), Positives = 46/79 (58%) Frame = -1
Query: 388 IAH*SSALAPKMSGTKRSAEAVGCQNTSVGERSAPDGSTSASRCGRSGSENVGLSNEYIG 209 I H ++ PK+ K +N SVGERSA +GST ASR + N IG Sbjct: 46 INHRGFSILPKLWDVKS-------KNASVGERSALEGSTRASRRVDEAEARI---NANIG 95
Query: 208 ENPMPRKRKGSSARFVHGG 152 ENPMPRK KGSSARFVHGG Sbjct: 96 ENPMPRKPKGSSARFVHGG 114
>tr|Q0MX19|Q0MX19_ARAHY Leucine rich protein OS=Arachis hypogaea PE=2 SV=1 Length = 182
Score = 63.2 bits (152), Expect = 9e-09 Identities = 49/133 (36%), Positives = 58/133 (43%), Gaps = 3/133 (2%) Frame = +1
Query: 43 RLT*PPPSLGTNKGQ-YGNINPLSINYASRPDXXXXXXXXXXXXXXXPYVFGALDSHQCI 219 R + P P G N + YG INPLS+ YA F + I Sbjct: 40 RTSPPGPPFGHNDVRWYGTINPLSVAYAHVSLGLGPTNPERIDLAQETLDFRCVGFSPTI 99
Query: 220 RYSSRHSRFRFVHTCSHWCFHLGRNAPLPMCFD--IPQLRQTAXXXXXXAQERLISELLR 393 RYS HS FR + F RNAPLP+ + I L A + SELLR Sbjct: 100 RYSCHHSHFRTLQPSLQSTFTAVRNAPLPLQAEPVIRSLGVLLSPVTLSAPDHSTSELLR 159
Query: 394 TLSRVAASRQTSW 432 TLSRVAAS+ TSW Sbjct: 160 TLSRVAASKPTSW 172
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