BP913408 |
Clone id |
YMU001_000029_H08 |
Library |
YMU01 |
Length |
237 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_H08. |
Accession |
BP913408 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGATAAAGACTCTGTGTCCAAGATCAATATGTATGACGAGATATCTCCAACAGTCGATTG TGTTGAAGGCCCTCAACAGGCTGTTCAAGAAGAGGAGCAGATCACCTTCTCTTACGATGT GACCTTTGTGAAAAGTGACATCCGTTGGCCATCCCGTTGGGATGCTTATCTTAAAATGGA AGGTGCACGAGTTCATTGGTTCTCAATCCTGAATTCTCTAATGGTTATTGCTTTCCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RDY2 |
Definition |
sp|Q5RDY2|TM9S4_PONAB Transmembrane 9 superfamily member 4 OS=Pongo abelii |
Align length |
62 |
Score (bit) |
65.1 |
E-value |
1.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6Z656 |
Definition |
tr|Q6Z656|Q6Z656_ORYSJ Os02g0722300 protein OS=Oryza sativa subsp. japonica |
Align length |
79 |
Score (bit) |
109.0 |
E-value |
8.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913408|Adiantum capillus-veneris mRNA, clone: YMU001_000029_H08. (237 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6Z656|Q6Z656_ORYSJ Os02g0722300 protein OS=Oryza sativa subs... 109 8e-23 tr|A3AAU9|A3AAU9_ORYSJ Putative uncharacterized protein OS=Oryza... 109 8e-23 tr|A2X928|A2X928_ORYSI Putative uncharacterized protein OS=Oryza... 109 8e-23 tr|B6U1D6|B6U1D6_MAIZE Transmembrane 9 superfamily protein membe... 108 1e-22 tr|A9NWV0|A9NWV0_PICSI Putative uncharacterized protein OS=Picea... 106 7e-22 tr|Q9XGQ5|Q9XGQ5_ORYSJ Os08g0496900 protein OS=Oryza sativa subs... 104 2e-21 tr|A3BUG8|A3BUG8_ORYSJ Putative uncharacterized protein OS=Oryza... 104 2e-21 tr|Q9SU21|Q9SU21_ARATH Putative uncharacterized protein AT4g1265... 104 2e-21 tr|Q60DU0|Q60DU0_ORYSJ Os05g0168500 protein OS=Oryza sativa subs... 102 7e-21 tr|B8AYG8|B8AYG8_ORYSI Putative uncharacterized protein OS=Oryza... 102 7e-21 tr|A3B0C9|A3B0C9_ORYSJ Putative uncharacterized protein OS=Oryza... 102 7e-21 tr|A7QS13|A7QS13_VITVI Chromosome undetermined scaffold_155, who... 100 3e-20 tr|A5ASY2|A5ASY2_VITVI Putative uncharacterized protein OS=Vitis... 100 3e-20 tr|A7Q2V0|A7Q2V0_VITVI Chromosome chr12 scaffold_47, whole genom... 98 2e-19 tr|Q69R01|Q69R01_ORYSJ Os02g0797700 protein OS=Oryza sativa subs... 97 4e-19 tr|A3ACB2|A3ACB2_ORYSJ Putative uncharacterized protein OS=Oryza... 97 4e-19 tr|A2XAL2|A2XAL2_ORYSI Putative uncharacterized protein OS=Oryza... 97 4e-19 tr|A9SAI5|A9SAI5_PHYPA Predicted protein OS=Physcomitrella paten... 97 5e-19 tr|B6ST61|B6ST61_MAIZE Transmembrane 9 superfamily protein membe... 95 2e-18 tr|A9RFD3|A9RFD3_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|Q9FYQ8|Q9FYQ8_ARATH Endosomal protein-like OS=Arabidopsis tha... 95 2e-18 tr|A9RFD0|A9RFD0_PHYPA Predicted protein OS=Physcomitrella paten... 94 3e-18 tr|Q8L424|Q8L424_ARATH Putative uncharacterized protein At5g3516... 90 6e-17 tr|A7PU34|A7PU34_VITVI Chromosome chr7 scaffold_31, whole genome... 86 9e-16 tr|Q6Z2D0|Q6Z2D0_ORYSJ Os08g0288400 protein OS=Oryza sativa subs... 80 4e-14 tr|Q6Z2C9|Q6Z2C9_ORYSJ Endosomal protein-like OS=Oryza sativa su... 80 4e-14 tr|A3BRK3|A3BRK3_ORYSJ Putative uncharacterized protein OS=Oryza... 80 4e-14 tr|A2YTI7|A2YTI7_ORYSI Putative uncharacterized protein OS=Oryza... 80 4e-14 tr|A8IIL1|A8IIL1_CHLRE EMP/nonaspanin domain family protein OS=C... 76 9e-13 tr|A9SFK2|A9SFK2_PHYPA Predicted protein OS=Physcomitrella paten... 75 2e-12
>tr|Q6Z656|Q6Z656_ORYSJ Os02g0722300 protein OS=Oryza sativa subsp. japonica GN=P0654B04.28 PE=2 SV=1 Length = 653
Score = 109 bits (272), Expect = 8e-23 Identities = 50/79 (63%), Positives = 66/79 (83%), Gaps = 1/79 (1%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVEGPQ-QAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLKM 178 D +++SK+ MY+++ PT VE + Q ++E+EQITF+Y+V FV SDIRWPSRWDAYLKM Sbjct: 222 DLEAMSKLKMYEKVDPTSCPVEMEKSQLIREKEQITFTYEVEFVNSDIRWPSRWDAYLKM 281
Query: 179 EGARVHWFSILNSLMVIAF 235 EGA++HWFSI+NSLMVI F Sbjct: 282 EGAKIHWFSIMNSLMVILF 300
>tr|A3AAU9|A3AAU9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_007921 PE=4 SV=1 Length = 546
Score = 109 bits (272), Expect = 8e-23 Identities = 50/79 (63%), Positives = 66/79 (83%), Gaps = 1/79 (1%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVEGPQ-QAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLKM 178 D +++SK+ MY+++ PT VE + Q ++E+EQITF+Y+V FV SDIRWPSRWDAYLKM Sbjct: 222 DLEAMSKLKMYEKVDPTSCPVEMEKSQLIREKEQITFTYEVEFVNSDIRWPSRWDAYLKM 281
Query: 179 EGARVHWFSILNSLMVIAF 235 EGA++HWFSI+NSLMVI F Sbjct: 282 EGAKIHWFSIMNSLMVILF 300
>tr|A2X928|A2X928_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08741 PE=4 SV=1 Length = 489
Score = 109 bits (272), Expect = 8e-23 Identities = 50/79 (63%), Positives = 66/79 (83%), Gaps = 1/79 (1%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVEGPQ-QAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLKM 178 D +++SK+ MY+++ PT VE + Q ++E+EQITF+Y+V FV SDIRWPSRWDAYLKM Sbjct: 222 DLEAMSKLKMYEKVDPTSCPVEMEKSQLIREKEQITFTYEVEFVNSDIRWPSRWDAYLKM 281
Query: 179 EGARVHWFSILNSLMVIAF 235 EGA++HWFSI+NSLMVI F Sbjct: 282 EGAKIHWFSIMNSLMVILF 300
>tr|B6U1D6|B6U1D6_MAIZE Transmembrane 9 superfamily protein member 4 OS=Zea mays PE=2 SV=1 Length = 653
Score = 108 bits (270), Expect = 1e-22 Identities = 50/79 (63%), Positives = 64/79 (81%), Gaps = 1/79 (1%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVE-GPQQAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLKM 178 D +S+ K+NMYD++ P VE Q V+E+E+ITF+Y+V FV SDIRWPSRWDAYLKM Sbjct: 222 DPESILKLNMYDKVDPVNCPVELEKSQLVREKEKITFTYEVEFVNSDIRWPSRWDAYLKM 281
Query: 179 EGARVHWFSILNSLMVIAF 235 EG+++HWFSI+NSLMVI F Sbjct: 282 EGSKIHWFSIMNSLMVILF 300
>tr|A9NWV0|A9NWV0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 664
Score = 106 bits (264), Expect = 7e-22 Identities = 50/79 (63%), Positives = 60/79 (75%), Gaps = 3/79 (3%) Frame = +2
Query: 8 DSVSKINMYDEISPTVDCV---EGPQQAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLKM 178 ++ S + MY + +DC GP QAV+E I FSY+V FV+SDI+WPSRWDAYLKM Sbjct: 233 EASSNLKMYGKYPTAIDCSPSGRGPYQAVKEGHPIAFSYEVAFVESDIKWPSRWDAYLKM 292
Query: 179 EGARVHWFSILNSLMVIAF 235 EGARVHWFSILNSLMVI+F Sbjct: 293 EGARVHWFSILNSLMVISF 311
>tr|Q9XGQ5|Q9XGQ5_ORYSJ Os08g0496900 protein OS=Oryza sativa subsp. japonica GN=P0026F07.9 PE=4 SV=1 Length = 661
Score = 104 bits (260), Expect = 2e-21 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 3/81 (3%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVEGPQ--QAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLK 175 D ++ SK NMYD I P V C Q Q ++++E+ITF+YDV FVKSDI+WPSRWDAYLK Sbjct: 228 DAEAFSKSNMYDSIEP-VSCPMELQKSQVIRQQERITFTYDVEFVKSDIKWPSRWDAYLK 286
Query: 176 ME-GARVHWFSILNSLMVIAF 235 ME GA+VHWFSI+NSLMVI F Sbjct: 287 MEAGAKVHWFSIMNSLMVILF 307
>tr|A3BUG8|A3BUG8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_026690 PE=4 SV=1 Length = 834
Score = 104 bits (260), Expect = 2e-21 Identities = 53/81 (65%), Positives = 64/81 (79%), Gaps = 3/81 (3%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVEGPQ--QAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLK 175 D ++ SK NMYD I P V C Q Q ++++E+ITF+YDV FVKSDI+WPSRWDAYLK Sbjct: 401 DAEAFSKSNMYDSIEP-VSCPMELQKSQVIRQQERITFTYDVEFVKSDIKWPSRWDAYLK 459
Query: 176 ME-GARVHWFSILNSLMVIAF 235 ME GA+VHWFSI+NSLMVI F Sbjct: 460 MEAGAKVHWFSIMNSLMVILF 480
>tr|Q9SU21|Q9SU21_ARATH Putative uncharacterized protein AT4g12650 OS=Arabidopsis thaliana GN=AT4g12650 PE=4 SV=1 Length = 527
Score = 104 bits (259), Expect = 2e-21 Identities = 50/80 (62%), Positives = 64/80 (80%), Gaps = 2/80 (2%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVE--GPQQAVQEEEQITFSYDVTFVKSDIRWPSRWDAYLK 175 D + ++K++MYD + P+V+C Q ++E E+ITF+Y+V FVKS+ RWPSRWDAYLK Sbjct: 95 DAEKMTKLHMYDPV-PSVNCPLELDKAQIIKEHERITFTYEVEFVKSETRWPSRWDAYLK 153
Query: 176 MEGARVHWFSILNSLMVIAF 235 MEGARVHWFSILNSLMVI F Sbjct: 154 MEGARVHWFSILNSLMVIFF 173
>tr|Q60DU0|Q60DU0_ORYSJ Os05g0168500 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0086E02.15 PE=2 SV=1 Length = 656
Score = 102 bits (255), Expect = 7e-21 Identities = 48/83 (57%), Positives = 66/83 (79%), Gaps = 5/83 (6%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVEGP-----QQAVQEEEQITFSYDVTFVKSDIRWPSRWDA 166 D +++SK+ MYD+ VD V+ P QA++E E+ITF+YDV +VKS+I+WPSRWDA Sbjct: 224 DPEAMSKLKMYDK----VDSVKCPLELEKSQAIRENERITFTYDVEYVKSNIKWPSRWDA 279
Query: 167 YLKMEGARVHWFSILNSLMVIAF 235 YLKM+GA+VHWFSI+NS+MV+ F Sbjct: 280 YLKMDGAKVHWFSIMNSMMVVFF 302
>tr|B8AYG8|B8AYG8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18611 PE=4 SV=1 Length = 656
Score = 102 bits (255), Expect = 7e-21 Identities = 48/83 (57%), Positives = 66/83 (79%), Gaps = 5/83 (6%) Frame = +2
Query: 2 DKDSVSKINMYDEISPTVDCVEGP-----QQAVQEEEQITFSYDVTFVKSDIRWPSRWDA 166 D +++SK+ MYD+ VD V+ P QA++E E+ITF+YDV +VKS+I+WPSRWDA Sbjct: 224 DPEAMSKLKMYDK----VDSVKCPLELEKSQAIRENERITFTYDVEYVKSNIKWPSRWDA 279
Query: 167 YLKMEGARVHWFSILNSLMVIAF 235 YLKM+GA+VHWFSI+NS+MV+ F Sbjct: 280 YLKMDGAKVHWFSIMNSMMVVFF 302
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