BP913409 |
Clone id |
YMU001_000029_H09 |
Library |
YMU01 |
Length |
497 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000029_H09. |
Accession |
BP913409 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTCTTGTTCAGATCTTGAGGAAACAAAGAGCTGATCTTCTGCATCATGAAAGGTCTCTCA AACTGCAAGAAAGGTCTCTTCAGGACACGCTGGAGAACTTGAGCAAGCAAAGAAAGACCT TGCAGTCTCAAAAAGAGTTGTTGAAGAAACTTACAACAGAAATTCAACGTAATCGGATGG TATAGGCATTATGCGCTTCAACATTTCACATGATTGCCTGTGACGGGGGGGACAATGGCA TTGCTGGAAGTCTGGTTGATTCAAAGGGGTGTGTTGTTGATAACTTCGAGTTCAACAGAG AGAACATGGATGCTTTTGATGTCTGTGAGAAGCTGTGGAACCTGTGTATGACAAGTTACG GTATTTCTATCTACCATTGCACACAACAGGGATCATCAGCACTCACTTTTCCTGGCTAAC ACTGACATTCAGCCTTCTCACATGGTCATAACTGGGGCTTGACACGAGTTAACGTAATCG ATTGAGAGCTGTGCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6C8F7 |
Definition |
sp|Q6C8F7|EFR3_YARLI Protein EFR3 OS=Yarrowia lipolytica |
Align length |
70 |
Score (bit) |
35.8 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XUW8 |
Definition |
tr|Q7XUW8|Q7XUW8_ORYSJ Os04g0445400 protein OS=Oryza sativa subsp. japonica |
Align length |
110 |
Score (bit) |
59.7 |
E-value |
7.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913409|Adiantum capillus-veneris mRNA, clone: YMU001_000029_H09. (497 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XUW8|Q7XUW8_ORYSJ Os04g0445400 protein OS=Oryza sativa subs... 60 7e-08 tr|Q01J37|Q01J37_ORYSA OSIGBa0140O07.6 protein OS=Oryza sativa G... 60 7e-08 tr|B8AUC8|B8AUC8_ORYSI Putative uncharacterized protein OS=Oryza... 60 7e-08 tr|B6SH44|B6SH44_MAIZE Putative uncharacterized protein OS=Zea m... 53 7e-06 tr|B6TFN8|B6TFN8_MAIZE Putative uncharacterized protein OS=Zea m... 52 2e-05 tr|Q67XT3|Q67XT3_ARATH Putative uncharacterized protein At3g0888... 50 8e-05 tr|A9PBN1|A9PBN1_POPTR Putative uncharacterized protein OS=Popul... 47 7e-04 tr|A7QKV0|A7QKV0_VITVI Chromosome chr8 scaffold_115, whole genom... 47 7e-04 tr|Q22SA1|Q22SA1_TETTH Putative uncharacterized protein OS=Tetra... 38 0.23 tr|Q9FKP4|Q9FKP4_ARATH Similarity to kinesin heavy chain OS=Arab... 36 0.88 tr|B5DHL5|B5DHL5_DROPS GA25631 OS=Drosophila pseudoobscura pseud... 36 0.88 tr|Q178A7|Q178A7_AEDAE Putative uncharacterized protein OS=Aedes... 35 1.5 tr|A0BH32|A0BH32_PARTE Chromosome undetermined scaffold_107, who... 35 1.5 tr|B5DMU6|B5DMU6_DROPS GA26587 OS=Drosophila pseudoobscura pseud... 35 2.0 tr|A5E4B9|A5E4B9_LODEL Putative uncharacterized protein OS=Lodde... 35 2.0 tr|Q73YH5|Q73YH5_MYCPA Putative uncharacterized protein OS=Mycob... 35 2.6 tr|B8CC91|B8CC91_THAPS Predicted protein OS=Thalassiosira pseudo... 35 2.6 tr|B2ITW2|B2ITW2_NOSP7 Putative uncharacterized protein OS=Nosto... 34 3.4 tr|Q23DH8|Q23DH8_TETTH DNA-directed RNA polymerase, omega subuni... 34 3.4 tr|B6KKK5|B6KKK5_TOXGO 60s ribosomal protein L19, putative OS=To... 34 3.4 tr|Q2FR12|Q2FR12_METHJ Acylphosphatases-like OS=Methanospirillum... 34 3.4 tr|Q4SZ42|Q4SZ42_TETNG Chromosome undetermined SCAF11841, whole ... 34 4.4 tr|Q1DEE3|Q1DEE3_MYXXD Sensor protein OS=Myxococcus xanthus (str... 34 4.4 tr|B8QZU8|B8QZU8_MYXFU Sensor histidine kinase/response regulato... 34 4.4 tr|A2ZUV1|A2ZUV1_ORYSJ Putative uncharacterized protein OS=Oryza... 34 4.4 tr|A6NQP9|A6NQP9_9BACE Putative uncharacterized protein OS=Bacte... 33 5.7 tr|A0CTT0|A0CTT0_PARTE Chromosome undetermined scaffold_27, whol... 33 5.7 tr|A2VDJ1|A2VDJ1_HUMAN GOLGA6 protein (Fragment) OS=Homo sapiens... 33 5.7 tr|B0YLL6|B0YLL6_9VIRU Putative uncharacterized protein OS=Gloss... 33 7.5 tr|Q0KA09|Q0KA09_RALEH Chromosome segregation ATPase OS=Ralstoni... 33 7.5
>tr|Q7XUW8|Q7XUW8_ORYSJ Os04g0445400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0027P08.12 PE=4 SV=2 Length = 198
Score = 59.7 bits (143), Expect = 7e-08 Identities = 30/110 (27%), Positives = 62/110 (56%) Frame = +3
Query: 15 LRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNRMV*ALC 194 L+K+ + L E+ L+ R+++D L+NL QR +++ +KE L+K+ E+ + + + ++C Sbjct: 89 LQKEMEEKLQDEQRLRQDLRAVRDELDNLDSQRDSIEQRKEALRKMEKEMMKAQNMLSMC 148
Query: 195 ASTFHMIACDGGDNGIAGSLVDSKGCVVDNFEFNRENMDAFDVCEKLWNL 344 S ++ + I+G +VD ++ FEF++ D+C LW + Sbjct: 149 VSVTKIMPNFEDKDKISGYIVDKNMKKLERFEFDK-TTPPVDICNNLWKM 197
>tr|Q01J37|Q01J37_ORYSA OSIGBa0140O07.6 protein OS=Oryza sativa GN=OSIGBa0140O07.6 PE=4 SV=1 Length = 198
Score = 59.7 bits (143), Expect = 7e-08 Identities = 30/110 (27%), Positives = 62/110 (56%) Frame = +3
Query: 15 LRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNRMV*ALC 194 L+K+ + L E+ L+ R+++D L+NL QR +++ +KE L+K+ E+ + + + ++C Sbjct: 89 LQKEMEEKLQDEQRLRQDLRAVRDELDNLDSQRDSIEQRKEALRKMEKEMMKAQNMLSMC 148
Query: 195 ASTFHMIACDGGDNGIAGSLVDSKGCVVDNFEFNRENMDAFDVCEKLWNL 344 S ++ + I+G +VD ++ FEF++ D+C LW + Sbjct: 149 VSVTKIMPNFEDKDKISGYIVDKNMKKLERFEFDK-TTPPVDICNNLWKM 197
>tr|B8AUC8|B8AUC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16054 PE=4 SV=1 Length = 198
Score = 59.7 bits (143), Expect = 7e-08 Identities = 30/110 (27%), Positives = 62/110 (56%) Frame = +3
Query: 15 LRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNRMV*ALC 194 L+K+ + L E+ L+ R+++D L+NL QR +++ +KE L+K+ E+ + + + ++C Sbjct: 89 LQKEMEEKLQDEQRLRQDLRAVRDELDNLDSQRDSIEQRKEALRKMEKEMMKAQNMLSMC 148
Query: 195 ASTFHMIACDGGDNGIAGSLVDSKGCVVDNFEFNRENMDAFDVCEKLWNL 344 S ++ + I+G +VD ++ FEF++ D+C LW + Sbjct: 149 VSVTKIMPNFEDKDKISGYIVDKNMKKLERFEFDK-TTPPVDICNNLWKM 197
>tr|B6SH44|B6SH44_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 198
Score = 53.1 bits (126), Expect = 7e-06 Identities = 27/108 (25%), Positives = 57/108 (52%) Frame = +3
Query: 15 LRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNRMV*ALC 194 L+ + + L E+ L+ + R L D L++L QR +++ +K+ +KK + Q+ ++C Sbjct: 89 LQSKMEEKLQEEKQLRQELRVLHDELDDLESQRLSIKERKDAVKKKKKDTQKAERTLSMC 148
Query: 195 ASTFHMIACDGGDNGIAGSLVDSKGCVVDNFEFNRENMDAFDVCEKLW 338 S ++I + ++G +VD ++ FEF ++C++LW Sbjct: 149 LSVTNIIPNLEDQDKVSGYIVDQNRKKIEKFEF-ENTTPPVEICDELW 195
>tr|B6TFN8|B6TFN8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 198
Score = 52.0 bits (123), Expect = 2e-05 Identities = 28/111 (25%), Positives = 56/111 (50%) Frame = +3
Query: 6 VQILRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNRMV* 185 + +L+ + + L ++ L+ + R+ + LENL QR ++Q +K+ +KK +++ Sbjct: 86 LSVLQNKMEENLQEDKQLREELRATHNDLENLDHQRASIQDRKDAIKKKDERMRKATYKL 145
Query: 186 ALCASTFHMIACDGGDNGIAGSLVDSKGCVVDNFEFNRENMDAFDVCEKLW 338 ++C S ++I + I+ VD G + FEF + D+C LW Sbjct: 146 SMCVSVTNIIPNLEDRDKISSYTVDKNGKKIQKFEFEK-TTPPVDICNTLW 195
>tr|Q67XT3|Q67XT3_ARATH Putative uncharacterized protein At3g08880 OS=Arabidopsis thaliana GN=At3g08880 PE=2 SV=1 Length = 201
Score = 49.7 bits (117), Expect = 8e-05 Identities = 26/113 (23%), Positives = 59/113 (52%) Frame = +3
Query: 6 VQILRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNRMV* 185 ++ L+K+ + + E LK + R + D L++L+ Q ++ K+ K+ + R Sbjct: 85 IERLQKELDEEMEREFKLKDELRLVADELKDLNAQLSSIDEHKQSTKRKVRDDLRAEKKL 144
Query: 186 ALCASTFHMIACDGGDNGIAGSLVDSKGCVVDNFEFNRENMDAFDVCEKLWNL 344 ++ AS ++I + I+G +VD + +++ F+F M A++ C +W++ Sbjct: 145 SMYASVTNVIPDIDDPSKISGYMVDREKRLIEKFQFETNKMTAYETCNSIWSI 197
>tr|A9PBN1|A9PBN1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 201
Score = 46.6 bits (109), Expect = 7e-04 Identities = 26/113 (23%), Positives = 58/113 (51%) Frame = +3
Query: 6 VQILRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNRMV* 185 ++IL ++ L E +L + R + + + +L QR + + +K +KK + R + Sbjct: 85 MEILEQELEVELQKEAALTEELRVINNEISDLECQRVSFEERKRNMKKNEKDELRAERML 144
Query: 186 ALCASTFHMIACDGGDNGIAGSLVDSKGCVVDNFEFNRENMDAFDVCEKLWNL 344 ++ AS ++I + I+G +V V+ FEF+ + +F++C+ +W + Sbjct: 145 SMYASVTNIIPDLDDHSKISGHIVHRDNKAVEKFEFDPTKISSFEICQSIWEM 197
>tr|A7QKV0|A7QKV0_VITVI Chromosome chr8 scaffold_115, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001291001 PE=4 SV=1 Length = 96
Score = 46.6 bits (109), Expect = 7e-04 Identities = 22/85 (25%), Positives = 46/85 (54%) Frame = +3
Query: 90 LENLSKQRKTLQSQKELLKKLTTEIQRNRMV*ALCASTFHMIACDGGDNGIAGSLVDSKG 269 + +L QR +++ + +++ KL + QR ++ AS ++I + I+G +V+ Sbjct: 9 INDLEHQRVSVEERNQIVTKLKQDDQRAESKLSMYASVTNIIPSLDDELKISGHIVERNK 68
Query: 270 CVVDNFEFNRENMDAFDVCEKLWNL 344 VV+ FEF+ + FD C ++W + Sbjct: 69 KVVEKFEFDPAKLSVFDACNRIWKM 93
>tr|Q22SA1|Q22SA1_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00006350 PE=4 SV=1 Length = 1893
Score = 38.1 bits (87), Expect = 0.23 Identities = 19/52 (36%), Positives = 33/52 (63%) Frame = +3
Query: 21 KQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNR 176 K+R DLL H++ ++LQ + L++ +E K + L Q L KKL TE++ ++ Sbjct: 1166 KEREDLLKHDKDIELQSKQLKEIMEKEYKHQ--LDVQISLAKKLETELEASK 1215
>tr|Q9FKP4|Q9FKP4_ARATH Similarity to kinesin heavy chain OS=Arabidopsis thaliana PE=3 SV=1 Length = 1264
Score = 36.2 bits (82), Expect = 0.88 Identities = 22/54 (40%), Positives = 32/54 (59%) Frame = +3
Query: 15 LRKQRADLLHHERSLKLQERSLQDTLENLSKQRKTLQSQKELLKKLTTEIQRNR 176 LR Q A LL E+ KLQ + T++NL + K L+SQ L K L +++ R+R Sbjct: 546 LRNQIAQLLQLEQEQKLQAQQQDSTIQNLQSKVKDLESQ--LSKALKSDMTRSR 597
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