NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913411
Clone id YMU001_000029_H11
Library
Length 310
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000029_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGTACACAAGACGTGTAGCCGTATACAAAAGCACAAAGCTTCATTTGACAGTATAAAAGT
TCGCAAAGGAGTGTGTCTAAAATAGGCTTCTTTTCCTCGTGTAGTATTTTATTACGTTGC
ACTAATTGCAAACGAGTGTTTACTCACCACTCAATTTTCCTTTTAAACAGCAGGGCCCTC
ATTGCAACCAACGCCTTTGCTCCTCTCCACAAAAAGTTTTTGAACTTCTTCAAACGAAAG
TCCCTTGGTCTCAGGAACAAACTTCCACACAAAAAGCAGGGCAATCAATGCAATCAGCCC
AAAAATGGCA
■■Homology search results ■■ -
sp_hit_id Q8VZR6
Definition sp|Q8VZR6|INT1_ARATH Probable inositol transporter 1 OS=Arabidopsis thaliana
Align length 34
Score (bit) 41.6
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913411|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_H11.
         (297 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8VZR6|INT1_ARATH Probable inositol transporter 1 OS=Arabidop...    42   0.001
sp|O23492|INT4_ARATH Inositol transporter 4 OS=Arabidopsis thali...    40   0.003
sp|Q9ZQP6|INT3_ARATH Probable inositol transporter 3 OS=Arabidop...    40   0.004
sp|Q0P4G6|GTR10_XENTR Solute carrier family 2, facilitated gluco...    40   0.004
sp|P0AGF4|XYLE_ECOLI D-xylose-proton symporter OS=Escherichia co...    40   0.005
sp|P0AGF5|XYLE_ECO57 D-xylose-proton symporter OS=Escherichia co...    40   0.005
sp|Q9C757|INT2_ARATH Probable inositol transporter 2 OS=Arabidop...    39   0.006
sp|Q94CI6|EDL18_ARATH Sugar transporter ERD6-like 18 OS=Arabidop...    39   0.006
sp|Q94CI7|EDL17_ARATH Sugar transporter ERD6-like 17 OS=Arabidop...    39   0.011
sp|Q4F7G0|ERDL2_ARATH Sugar transporter ERD6-like 2 OS=Arabidops...    37   0.024
sp|Q0WWW9|XYLL3_ARATH D-xylose-proton symporter-like 3 OS=Arabid...    37   0.040
sp|P13181|GAL2_YEAST Galactose transporter OS=Saccharomyces cere...    36   0.053
sp|Q9M0Z9|EDL15_ARATH Sugar transporter ERD6-like 15 OS=Arabidop...    36   0.069
sp|Q93Z80|EDL10_ARATH Sugar transporter ERD6-like 10 OS=Arabidop...    36   0.069
sp|P43427|GTR5_RAT Solute carrier family 2, facilitated glucose ...    35   0.12 
sp|P53387|KHT2_KLULA Hexose transporter 2 OS=Kluyveromyces lacti...    35   0.15 
sp|P32465|HXT1_YEAST Low-affinity glucose transporter HXT1 OS=Sa...    35   0.15 
sp|Q9SCW7|ERDL1_ARATH Sugar transporter ERD6-like 1 OS=Arabidops...    35   0.15 
sp|P18631|RAG1_KLULA Low-affinity glucose transporter OS=Kluyver...    34   0.20 
sp|A4ZYQ5|GTR7_RAT Solute carrier family 2, facilitated glucose ...    34   0.20 
sp|Q6PXP3|GTR7_HUMAN Solute carrier family 2, facilitated glucos...    34   0.20 
sp|P54723|YFIG_BACSU Putative metabolite transport protein yfiG ...    34   0.26 
sp|Q921A2|MYCT_RAT Proton myo-inositol cotransporter OS=Rattus n...    34   0.26 
sp|Q3UHK1|MYCT_MOUSE Proton myo-inositol cotransporter OS=Mus mu...    34   0.26 
sp|Q0WQ63|ERDL8_ARATH Sugar transporter ERD6-like 8 OS=Arabidops...    34   0.26 
sp|Q8L6Z8|XYLL1_ARATH D-xylose-proton symporter-like 1 OS=Arabid...    33   0.34 
sp|Q96QE2|MYCT_HUMAN Proton myo-inositol cotransporter OS=Homo s...    33   0.34 
sp|O34718|IOLT_BACSU Major myo-inositol transporter iolT OS=Baci...    33   0.34 
sp|P38695|HXT5_YEAST Probable glucose transporter HXT5 OS=Saccha...    33   0.34 
sp|P32466|HXT3_YEAST Low-affinity glucose transporter HXT3 OS=Sa...    33   0.34 

>sp|Q8VZR6|INT1_ARATH Probable inositol transporter 1 OS=Arabidopsis
           thaliana GN=INT1 PE=2 SV=1
          Length = 509

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 18/34 (52%), Positives = 29/34 (85%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSKG 193
           IA++A++FV  FVPET+GL+F EV++++ ER+ G
Sbjct: 452 IAVLAVIFVIVFVPETQGLTFSEVEQIWKERAYG 485


>sp|O23492|INT4_ARATH Inositol transporter 4 OS=Arabidopsis thaliana
           GN=INT4 PE=1 SV=1
          Length = 582

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = -1

Query: 285 IALLFVWKFVPETKGLSFEEVQKL 214
           I L F+W  VPETKGL FEEV+KL
Sbjct: 536 IGLFFIWLLVPETKGLQFEEVEKL 559


>sp|Q9ZQP6|INT3_ARATH Probable inositol transporter 3 OS=Arabidopsis
           thaliana GN=INT3 PE=2 SV=1
          Length = 580

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -1

Query: 285 IALLFVWKFVPETKGLSFEEVQKL 214
           + L F+W  VPETKGL FEEV+KL
Sbjct: 535 VGLFFIWLLVPETKGLQFEEVEKL 558


>sp|Q0P4G6|GTR10_XENTR Solute carrier family 2, facilitated glucose
           transporter member 10 OS=Xenopus tropicalis GN=slc2a10
           PE=2 SV=1
          Length = 555

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 8/45 (17%)
 Frame = -1

Query: 297 LIALIALLFVWKFVPETKGLSFEEVQKLFV--------ERSKGVG 187
           ++ L+A+ F++ F+PETKG S EE+ K F         E SKGVG
Sbjct: 493 VVGLLAIAFIYFFIPETKGQSLEEIDKQFSTKRILQKRETSKGVG 537


>sp|P0AGF4|XYLE_ECOLI D-xylose-proton symporter OS=Escherichia coli
           (strain K12) GN=xylE PE=1 SV=1
          Length = 491

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSK 196
           + ++A LF+WKFVPETKG + EE++ L+   +K
Sbjct: 451 MGVLAALFMWKFVPETKGKTLEELEALWEPETK 483


>sp|P0AGF5|XYLE_ECO57 D-xylose-proton symporter OS=Escherichia coli
           O157:H7 GN=xylE PE=3 SV=1
          Length = 491

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 16/33 (48%), Positives = 25/33 (75%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSK 196
           + ++A LF+WKFVPETKG + EE++ L+   +K
Sbjct: 451 MGVLAALFMWKFVPETKGKTLEELEALWEPETK 483


>sp|Q9C757|INT2_ARATH Probable inositol transporter 2 OS=Arabidopsis
           thaliana GN=INT2 PE=2 SV=1
          Length = 580

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -1

Query: 297 LIALIALLFVWKFVPETKGLSFEEVQKLFVERS 199
           +I++IALLFV   VPETKG+  EE++K+   RS
Sbjct: 528 VISVIALLFVMVCVPETKGMPMEEIEKMLERRS 560


>sp|Q94CI6|EDL18_ARATH Sugar transporter ERD6-like 18 OS=Arabidopsis
           thaliana GN=SFP2 PE=2 SV=1
          Length = 478

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = -1

Query: 285 IALLFVWKFVPETKGLSFEEVQ 220
           +ALLF+W  VPETKGLS EE+Q
Sbjct: 444 LALLFIWLLVPETKGLSLEEIQ 465


>sp|Q94CI7|EDL17_ARATH Sugar transporter ERD6-like 17 OS=Arabidopsis
           thaliana GN=SFP1 PE=2 SV=2
          Length = 474

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -1

Query: 282 ALLFVWKFVPETKGLSFEEVQ 220
           ALLF+W  VPETKGLS EE+Q
Sbjct: 441 ALLFIWLLVPETKGLSLEEIQ 461


>sp|Q4F7G0|ERDL2_ARATH Sugar transporter ERD6-like 2 OS=Arabidopsis
           thaliana GN=SUGTL3 PE=2 SV=1
          Length = 462

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERS 199
           ++L+ ++F+W  VPETKG + EE+Q   V  S
Sbjct: 431 VSLVTIVFIWTLVPETKGRTLEEIQTSLVRLS 462
tr_hit_id Q01IT9
Definition tr|Q01IT9|Q01IT9_ORYSA OSIGBa0130B08.11 protein OS=Oryza sativa
Align length 38
Score (bit) 46.6
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913411|Adiantum capillus-veneris mRNA, clone:
YMU001_000029_H11.
         (297 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q01IT9|Q01IT9_ORYSA OSIGBa0130B08.11 protein OS=Oryza sativa ...    47   6e-04
tr|A7QM50|A7QM50_VITVI Chromosome chr5 scaffold_124, whole genom...    45   0.001
tr|B5CZU9|B5CZU9_9BACE Putative uncharacterized protein OS=Bacte...    43   0.009
tr|Q7XUE4|Q7XUE4_ORYSJ Os04g0491700 protein OS=Oryza sativa subs...    43   0.009
tr|B8AVV5|B8AVV5_ORYSI Putative uncharacterized protein OS=Oryza...    43   0.009
tr|A3AV56|A3AV56_ORYSJ Putative uncharacterized protein OS=Oryza...    43   0.009
tr|A6L7L1|A6L7L1_BACV8 Putative sugar-transport membrane protein...    42   0.015
tr|Q84UY4|Q84UY4_MESCR Putative Na+/myo-inositol symporter OS=Me...    42   0.015
tr|Q65PX9|Q65PX9_MANSM ProP protein OS=Mannheimia succiniciprodu...    42   0.020
tr|Q64U19|Q64U19_BACFR D-xylose-proton symporter OS=Bacteroides ...    42   0.020
tr|B3JMM3|B3JMM3_9BACE Putative uncharacterized protein OS=Bacte...    42   0.020
tr|B7FGB8|B7FGB8_MEDTR Putative uncharacterized protein OS=Medic...    42   0.020
tr|B6U4Q3|B6U4Q3_MAIZE Membrane transporter D1 OS=Zea mays PE=2 ...    42   0.020
tr|A2Q2S7|A2Q2S7_MEDTR General substrate transporter OS=Medicago...    42   0.020
tr|Q5LCV8|Q5LCV8_BACFN Putative sugar-transport membrane protein...    41   0.026
tr|B4TQP4|B4TQP4_SALSV D-xylose-proton symporter OS=Salmonella s...    41   0.026
tr|B5CJI7|B5CJI7_SALET D-xylose-proton symporter (D-xylose trans...    41   0.026
tr|A7UZG4|A7UZG4_BACUN Putative uncharacterized protein OS=Bacte...    41   0.034
tr|A0Y7K1|A0Y7K1_9GAMM ProP protein OS=marine gamma proteobacter...    41   0.034
tr|A4GXC9|A4GXC9_ANACO Sugar transporter protein OS=Ananas comos...    41   0.034
tr|B7AJP7|B7AJP7_9BACE Putative uncharacterized protein OS=Bacte...    40   0.044
tr|A9SH22|A9SH22_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.044
tr|B6MHI7|B6MHI7_BRAFL Putative uncharacterized protein (Fragmen...    40   0.044
tr|A6VLM4|A6VLM4_ACTSZ Sugar transporter OS=Actinobacillus succi...    40   0.057
tr|A2QLQ1|A2QLQ1_ASPNC Contig An06c0090, complete genome. OS=Asp...    40   0.057
tr|Q973I9|Q973I9_SULTO 476aa long hypothetical sugar transporter...    40   0.057
tr|Q83P80|Q83P80_SHIFL Xylose-proton symportor OS=Shigella flexn...    40   0.075
tr|Q3YUV4|Q3YUV4_SHISS Xylose-proton symport OS=Shigella sonnei ...    40   0.075
tr|B6I5P5|B6I5P5_ECOSE Xylose-proton symporter OS=Escherichia co...    40   0.075
tr|B5Z172|B5Z172_ECO5E D-xylose-proton symporter OS=Escherichia ...    40   0.075

>tr|Q01IT9|Q01IT9_ORYSA OSIGBa0130B08.11 protein OS=Oryza sativa
           GN=OSIGBa0130B08.11 PE=3 SV=1
          Length = 506

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSKGVGCN 181
           IA++A +FV  +VPETKGLSFE+V+ L+ ER+ G  CN
Sbjct: 460 IAVLAFIFVALYVPETKGLSFEQVELLWKERAWGNQCN 497


>tr|A7QM50|A7QM50_VITVI Chromosome chr5 scaffold_124, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001923001
           PE=3 SV=1
          Length = 499

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 20/40 (50%), Positives = 31/40 (77%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSKGVGCNEG 175
           +A++A +FV  F+PETKGL+FEE+ +L+ ER++G    EG
Sbjct: 449 VAVVAFVFVIVFLPETKGLTFEEMDQLWKERARGHSRGEG 488


>tr|B5CZU9|B5CZU9_9BACE Putative uncharacterized protein
           OS=Bacteroides plebeius DSM 17135 GN=BACPLE_02266 PE=4
           SV=1
          Length = 493

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSK 196
           I +IA +FVWK VPETKG + E++ +L+ ER K
Sbjct: 461 ICIIAAIFVWKLVPETKGKTLEDMTRLWKERQK 493


>tr|Q7XUE4|Q7XUE4_ORYSJ Os04g0491700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0076N16.21 PE=2 SV=2
          Length = 506

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSKG 193
           IA++A +FV  +VPETKGLSFE+V+ L+ ER+ G
Sbjct: 460 IAVLAFIFVALYVPETKGLSFEQVELLWKERAWG 493


>tr|B8AVV5|B8AVV5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16434 PE=4 SV=1
          Length = 506

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSKG 193
           IA++A +FV  +VPETKGLSFE+V+ L+ ER+ G
Sbjct: 460 IAVLAFIFVALYVPETKGLSFEQVELLWKERAWG 493


>tr|A3AV56|A3AV56_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_014678 PE=3 SV=1
          Length = 471

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSKG 193
           IA++A +FV  +VPETKGLSFE+V+ L+ ER+ G
Sbjct: 425 IAVLAFIFVALYVPETKGLSFEQVELLWKERAWG 458


>tr|A6L7L1|A6L7L1_BACV8 Putative sugar-transport membrane protein
           OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
           NCTC 11154) GN=BVU_4073 PE=3 SV=1
          Length = 458

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 17/34 (50%), Positives = 27/34 (79%)
 Frame = -1

Query: 297 LIALIALLFVWKFVPETKGLSFEEVQKLFVERSK 196
           +I ++A LFVWK VPETKG + E++ +L+ ER++
Sbjct: 425 VICVLAALFVWKMVPETKGKTLEDMTRLWKERAR 458


>tr|Q84UY4|Q84UY4_MESCR Putative Na+/myo-inositol symporter
           OS=Mesembryanthemum crystallinum GN=Itr3 PE=2 SV=1
          Length = 498

 Score = 42.0 bits (97), Expect = 0.015
 Identities = 18/34 (52%), Positives = 27/34 (79%)
 Frame = -1

Query: 294 IALIALLFVWKFVPETKGLSFEEVQKLFVERSKG 193
           I ++A +FV  FVPETK L+FEEV ++F++R+ G
Sbjct: 448 IVIVAFVFVVCFVPETKALTFEEVDQMFMDRAYG 481


>tr|Q65PX9|Q65PX9_MANSM ProP protein OS=Mannheimia
           succiniciproducens (strain MBEL55E) GN=proP PE=3 SV=1
          Length = 481

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 17/29 (58%), Positives = 25/29 (86%)
 Frame = -1

Query: 297 LIALIALLFVWKFVPETKGLSFEEVQKLF 211
           L+A++A LF+WKFVPETKG + EE++ L+
Sbjct: 450 LMAILAALFMWKFVPETKGKTLEELELLW 478


>tr|Q64U19|Q64U19_BACFR D-xylose-proton symporter OS=Bacteroides
           fragilis GN=BF2263 PE=4 SV=1
          Length = 482

 Score = 41.6 bits (96), Expect = 0.020
 Identities = 17/32 (53%), Positives = 26/32 (81%)
 Frame = -1

Query: 297 LIALIALLFVWKFVPETKGLSFEEVQKLFVER 202
           +I +IA LFVW++VPETKG + E++ KL+ +R
Sbjct: 451 IICMIAALFVWRWVPETKGKTLEDMSKLWKKR 482