| BP913412 |
| Clone id |
YMU001_000030_A01 |
| Library |
YMU01 |
| Length |
271 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000030_A01. |
| Accession |
BP913412 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1687Contig1 |
| Sequence |
CCAAAACGGCATGGCAACTGATAATCATGATAGTGTGTGCAACAAATGTAAACAAGAAGG
ACAGCTTATTTGCTGCTGACGGGCAAGGATTGTAAAATCACATTACACATAGACTGTCTA
GATCCTCCTTTAAGGGACGCGCCTCCAAACGACTGGTACTGCCCTCGATGTGCGTGTAAG
AGGATCTATGGTGGAATGCATTCAGTTTCAAAGGGTATAGAATCGATTTGGGGTGTAAAG
TCAAGTGAATGATGGCTCGGACAGAGGGACT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q12873 |
| Definition |
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens |
| Align length |
54 |
| Score (bit) |
47.8 |
| E-value |
8.0e-08 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913412|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_A01.
(256 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3... 48 8e-08
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 48 8e-08
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 48 8e-08
sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein M... 45 2e-07
sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5... 46 3e-07
sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=... 44 3e-06
sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=... 43 9e-06
sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=P... 38 2e-05
sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=P... 38 2e-05
sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protei... 46 5e-05
sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing prot... 46 5e-05
sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing prot... 45 1e-04
sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF3... 44 2e-04
sp|Q96T88|UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1 OS=Homo ... 43 6e-04
sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=... 42 0.001
sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=... 42 0.001
sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=... 42 0.001
sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccha... 42 0.001
sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3... 42 0.001
sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=... 37 0.002
sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus m... 40 0.003
sp|Q80Y84|JAD1B_MOUSE Histone demethylase JARID1B OS=Mus musculu... 40 0.003
sp|Q9UGL1|JAD1B_HUMAN Histone demethylase JARID1B OS=Homo sapien... 40 0.003
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 40 0.003
sp|Q8C966|PF21B_MOUSE PHD finger protein 21B OS=Mus musculus GN=... 40 0.004
sp|Q5F3R2|JAD1B_CHICK Histone demethylase JARID1B OS=Gallus gall... 40 0.004
sp|P29375|JAD1A_HUMAN Histone demethylase JARID1A OS=Homo sapien... 40 0.004
sp|Q6IQX0|JA1BB_DANRE Histone demethylase JARID1B-B OS=Danio rer... 40 0.004
sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF O... 40 0.004
sp|Q7TPK1|UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 OS=Rattus ... 40 0.005
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3
OS=Homo sapiens GN=CHD3 PE=1 SV=3
Length = 2000
Score = 47.8 bits (112), Expect(2) = 8e-08
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWG 219
LL C + HI CL+PPL D P +W CPRC C + G V K + WG
Sbjct: 468 LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG---RVQKILHWRWG 518
Score = 28.5 bits (62), Expect(2) = 8e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 453 DDHMEYCRVCKDGGELLCC 471
Score = 35.0 bits (79), Expect(2) = 0.008
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP L AP W CP C
Sbjct: 397 CPRAYHLVCLDPELDRAPEGKWSCPHC 423
Score = 23.9 bits (50), Expect(2) = 0.008
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 377 DHQDYCEVCQQGGEIILC 394
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4
OS=Mus musculus GN=Chd4 PE=1 SV=1
Length = 1915
Score = 47.8 bits (112), Expect(2) = 8e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSV 192
LL C + HI CL+PPL + P +W CPRC C + G + +
Sbjct: 454 LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKI 498
Score = 28.5 bits (62), Expect(2) = 8e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 439 DHHMEFCRVCKDGGELLCC 457
Score = 35.0 bits (79), Expect(2) = 0.008
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP + AP W CP C
Sbjct: 381 CPRAYHMVCLDPDMEKAPEGKWSCPHC 407
Score = 23.9 bits (50), Expect(2) = 0.008
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 361 DHQDYCEVCQQGGEIILC 378
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4
OS=Homo sapiens GN=CHD4 PE=1 SV=1
Length = 1912
Score = 47.8 bits (112), Expect(2) = 8e-08
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSV 192
LL C + HI CL+PPL + P +W CPRC C + G + +
Sbjct: 461 LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKI 505
Score = 28.5 bits (62), Expect(2) = 8e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 446 DHHMEFCRVCKDGGELLCC 464
Score = 35.0 bits (79), Expect(2) = 0.008
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP + AP W CP C
Sbjct: 388 CPRAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 23.9 bits (50), Expect(2) = 0.008
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 368 DHQDYCEVCQQGGEIILC 385
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2
homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 45.4 bits (106), Expect(2) = 2e-07
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWGVKSSE 234
LL C H CL+PPL P DW CPRC+C + G K I W +S++
Sbjct: 449 LLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSCPPLTG---KAEKIITWRWAQRSND 504
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D H C CK G+L+CC
Sbjct: 434 DEHQEFCRVCKDGGELLCC 452
Score = 33.1 bits (74), Expect(2) = 0.039
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CL+P L + P W CP C
Sbjct: 395 CPRAYHLVCLEPELDEPPEGKWSCPHC 421
Score = 23.5 bits (49), Expect(2) = 0.039
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 11 HDSVCNKCKQEGQLICC 61
H C C+Q G++I C
Sbjct: 376 HQDYCEVCQQGGEIILC 392
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5
OS=Homo sapiens GN=CHD5 PE=2 SV=1
Length = 1954
Score = 45.8 bits (107), Expect(2) = 3e-07
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSV 192
LL C + H+ CL+PPL + P +W CPRC C + G + +
Sbjct: 428 LLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRI 472
Score = 28.5 bits (62), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 413 DDHMEFCRVCKDGGELLCC 431
Score = 36.2 bits (82), Expect(2) = 0.004
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP L AP W CP C
Sbjct: 361 CPRAYHLVCLDPELEKAPEGKWSCPHC 387
Score = 23.9 bits (50), Expect(2) = 0.004
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 341 DHQDYCEVCQQGGEIILC 358
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens
GN=PHF21A PE=1 SV=1
Length = 680
Score = 44.3 bits (103), Expect(2) = 3e-06
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRC 156
LL C H+DCLDPPL+ P W CPRC
Sbjct: 500 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
Score = 26.6 bits (57), Expect(2) = 3e-06
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D H+ C+ C++ GQL+ C
Sbjct: 485 DIHEDFCSVCRKSGQLLMC 503
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus
GN=Phf21a PE=1 SV=2
Length = 659
Score = 42.7 bits (99), Expect(2) = 9e-06
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRC 156
LL C H+DCL+PPL+ P W CPRC
Sbjct: 480 LLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 512
Score = 26.6 bits (57), Expect(2) = 9e-06
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D H+ C+ C++ GQL+ C
Sbjct: 465 DIHEDFCSVCRKSGQLLMC 483
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus
GN=Phf12 PE=2 SV=1
Length = 1003
Score = 37.7 bits (86), Expect(2) = 2e-05
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDA--PPNDWYCPRCACKR 168
LL C H+ C +PPL + PP +W C RC +R
Sbjct: 68 LLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 30.0 bits (66), Expect(2) = 2e-05
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
NHDS C+ CK+ G L+CC
Sbjct: 55 NHDS-CDSCKEGGDLLCC 71
Score = 35.8 bits (81), Expect = 0.067
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCP 150
C + H+DCL+PPL P W CP
Sbjct: 292 CPLLFHMDCLEPPLTAMPLGRWMCP 316
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens
GN=PHF12 PE=1 SV=2
Length = 1004
Score = 37.7 bits (86), Expect(2) = 2e-05
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDA--PPNDWYCPRCACKR 168
LL C H+ C +PPL + PP +W C RC +R
Sbjct: 68 LLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRR 106
Score = 30.0 bits (66), Expect(2) = 2e-05
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
NHDS C+ CK+ G L+CC
Sbjct: 55 NHDS-CDSCKEGGDLLCC 71
Score = 35.8 bits (81), Expect = 0.067
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCP 150
C + H+DCL+PPL P W CP
Sbjct: 292 CPLLFHMDCLEPPLTAMPLGRWMCP 316
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1
OS=Rattus norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 46.2 bits (108), Expect = 5e-05
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCA 159
LL C H++CLDPPL++ P ++W+CP CA
Sbjct: 203 LLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECA 236
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
B5RHT6 |
| Definition |
tr|B5RHT6|B5RHT6_MUSBA Uncharacterized protein OS=Musa balbisiana |
| Align length |
53 |
| Score (bit) |
63.5 |
| E-value |
5.0e-09 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913412|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_A01.
(256 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B5RHT6|B5RHT6_MUSBA Uncharacterized protein OS=Musa balbisian... 64 5e-09
tr|B8AGJ8|B8AGJ8_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07
tr|B3S0B1|B3S0B1_TRIAD Putative uncharacterized protein (Fragmen... 52 3e-07
tr|Q4T5L7|Q4T5L7_TETNG Chromosome undetermined SCAF9199, whole g... 48 7e-07
tr|Q4S447|Q4S447_TETNG Chromosome 20 SCAF14744, whole genome sho... 48 9e-07
tr|B1AR17|B1AR17_MOUSE Chromodomain helicase DNA binding protein... 48 9e-07
tr|Q2KMK7|Q2KMK7_RAT Chromodomain helicase DNA-binding protein 3... 48 9e-07
tr|Q5DTP7|Q5DTP7_MOUSE MKIAA4075 protein (Fragment) OS=Mus muscu... 48 9e-07
tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate chrom... 48 9e-07
tr|Q2KMK9|Q2KMK9_RAT Chromodomain helicase DNA-binding protein 3... 48 9e-07
tr|Q2KML1|Q2KML1_RAT Chromodomain helicase DNA-binding protein 3... 48 9e-07
tr|Q2KML0|Q2KML0_RAT Chromodomain helicase DNA-binding protein 3... 48 9e-07
tr|B1AR16|B1AR16_MOUSE Chromodomain helicase DNA binding protein... 48 9e-07
tr|B3KY63|B3KY63_HUMAN cDNA FLJ16830 fis, clone UTERU3022536, hi... 48 9e-07
tr|Q8BM83|Q8BM83_MOUSE Putative uncharacterized protein (Fragmen... 48 9e-07
tr|Q3U582|Q3U582_MOUSE Putative uncharacterized protein (Fragmen... 48 9e-07
tr|Q8BR71|Q8BR71_MOUSE Putative uncharacterized protein (Fragmen... 48 9e-07
tr|A9JSS2|A9JSS2_DANRE Si:ch211-51m24.3 protein (Fragment) OS=Da... 48 9e-07
tr|A4IG92|A4IG92_DANRE Si:ch211-51m24.3 protein (Fragment) OS=Da... 48 9e-07
tr|Q4SNF1|Q4SNF1_TETNG Chromosome 8 SCAF14543, whole genome shot... 47 1e-06
tr|A3KN93|A3KN93_XENTR Chd4 protein OS=Xenopus tropicalis GN=chd... 47 1e-06
tr|Q7ZWN3|Q7ZWN3_XENLA B230399n07 protein OS=Xenopus laevis GN=c... 47 2e-06
tr|Q59E34|Q59E34_DROME Mi-2, isoform B OS=Drosophila melanogaste... 45 2e-06
tr|B4PFW6|B4PFW6_DROYA GE22457 OS=Drosophila yakuba GN=Dyak\GE22... 45 2e-06
tr|B3M8T6|B3M8T6_DROAN GF10842 OS=Drosophila ananassae GN=GF1084... 45 2e-06
tr|B4IIS0|B4IIS0_DROSE GM15785 OS=Drosophila sechellia GN=GM1578... 45 2e-06
tr|B3NE02|B3NE02_DROER GG13363 OS=Drosophila erecta GN=GG13363 P... 45 3e-06
tr|Q7PZN7|Q7PZN7_ANOGA AGAP012009-PA OS=Anopheles gambiae GN=AGA... 45 3e-06
tr|B4IXP0|B4IXP0_DROGR GH16907 OS=Drosophila grimshawi GN=GH1690... 45 3e-06
tr|B4LBL9|B4LBL9_DROVI GJ13998 OS=Drosophila virilis GN=GJ13998 ... 45 3e-06
>tr|B5RHT6|B5RHT6_MUSBA Uncharacterized protein OS=Musa balbisiana
PE=4 SV=1
Length = 405
Score = 63.5 bits (153), Expect = 5e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 67 GKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWGVK 225
GK C + H+ CLDPPL+D P W C C ++I G++SVS+GI+SIW +K
Sbjct: 180 GKGCNRSYHLSCLDPPLQDTLPGVWLCIFCIKRKIEFGVYSVSEGIDSIWNIK 232
>tr|B8AGJ8|B8AGJ8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05543 PE=4 SV=1
Length = 2670
Score = 58.5 bits (140), Expect = 2e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1
Query: 67 GKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWGVK 225
G+ CK + H+ CLD L P W+C C KR+ G+HSV+ GIES+W VK
Sbjct: 334 GEGCKRSYHVSCLDHWLEYLSPGMWFCTVCTEKRLLFGIHSVADGIESLWNVK 386
>tr|B3S0B1|B3S0B1_TRIAD Putative uncharacterized protein (Fragment)
OS=Trichoplax adhaerens GN=TRIADDRAFT_27056 PE=4 SV=1
Length = 871
Score = 52.0 bits (123), Expect(2) = 3e-07
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRI 171
LL C ++ H+ CL+PPL D P DW CPRC C R+
Sbjct: 12 LLCCDSCPLSYHLRCLNPPLEDIPEGDWRCPRCLCPRL 49
Score = 25.8 bits (55), Expect(2) = 3e-07
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 23 CNKCKQEGQLICC 61
C+ CK GQL+CC
Sbjct: 3 CHVCKDGGQLLCC 15
>tr|Q4T5L7|Q4T5L7_TETNG Chromosome undetermined SCAF9199, whole
genome shotgun sequence. (Fragment) OS=Tetraodon
nigroviridis GN=GSTENG00006740001 PE=4 SV=1
Length = 1369
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWG 219
LL C + HI CL+PPL + P +W CPRC C + G V K + WG
Sbjct: 344 LLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKG---KVQKILTWRWG 394
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 329 DHHMEFCRVCKDGGELLCC 347
Score = 35.0 bits (79), Expect(2) = 0.094
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP + AP W CP C
Sbjct: 274 CPRAYHMVCLDPDMEKAPEGTWSCPHC 300
Score = 23.9 bits (50), Expect(2) = 0.094
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 254 DHQDYCEVCQQGGEIILC 271
>tr|Q4S447|Q4S447_TETNG Chromosome 20 SCAF14744, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00024354001 PE=4 SV=1
Length = 2248
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSV 192
LL C + HI CL+PPL + P +W CPRC C I G + +
Sbjct: 375 LLCCDTCTSSYHIHCLNPPLPEIPNGEWLCPRCTCPPIKGRVQRI 419
Score = 28.5 bits (62), Expect(2) = 9e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 360 DDHMEFCRVCKDGGELLCC 378
Score = 33.9 bits (76), Expect(2) = 0.20
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CL+P L AP W CP C
Sbjct: 292 CPRAYHLVCLEPELDKAPEGKWSCPHC 318
Score = 23.9 bits (50), Expect(2) = 0.20
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 272 DHQDYCEVCQQGGEIILC 289
>tr|B1AR17|B1AR17_MOUSE Chromodomain helicase DNA binding protein 3
OS=Mus musculus GN=Chd3 PE=4 SV=1
Length = 2055
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWG 219
LL C + HI CL+PPL D P +W CPRC C + G V K + WG
Sbjct: 520 LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG---RVQKILHWRWG 570
Score = 28.5 bits (62), Expect(2) = 9e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 505 DDHMEYCRVCKDGGELLCC 523
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP L AP W CP C
Sbjct: 450 CPRAYHLVCLDPELDRAPEGKWSCPHC 476
Score = 23.9 bits (50), Expect(2) = 0.092
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 430 DHQDYCEVCQQGGEIILC 447
>tr|Q2KMK7|Q2KMK7_RAT Chromodomain helicase DNA-binding protein 3
long isoform (Fragment) OS=Rattus norvegicus GN=Chd3
PE=2 SV=1
Length = 1959
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWG 219
LL C + HI CL+PPL D P +W CPRC C + G V K + WG
Sbjct: 424 LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG---RVQKILHWRWG 474
Score = 28.5 bits (62), Expect(2) = 9e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 409 DDHMEYCRVCKDGGELLCC 427
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP L AP W CP C
Sbjct: 354 CPRAYHLVCLDPELDRAPEGKWSCPHC 380
Score = 23.9 bits (50), Expect(2) = 0.092
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 334 DHQDYCEVCQQGGEIILC 351
>tr|Q5DTP7|Q5DTP7_MOUSE MKIAA4075 protein (Fragment) OS=Mus musculus
GN=Chd4 PE=2 SV=1
Length = 1945
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSV 192
LL C + HI CL+PPL + P +W CPRC C + G + +
Sbjct: 482 LLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPALKGKVQKI 526
Score = 28.5 bits (62), Expect(2) = 9e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 467 DHHMEFCRVCKDGGELLCC 485
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP + AP W CP C
Sbjct: 409 CPRAYHMVCLDPDMEKAPEGKWSCPHC 435
Score = 23.9 bits (50), Expect(2) = 0.092
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 389 DHQDYCEVCQQGGEIILC 406
>tr|Q1LYP4|Q1LYP4_DANRE Novel protein similar to vertebrate
chromodomain helicase DNA binding protein 4 (CHD4)
OS=Danio rerio GN=si:ch211-51m24.3 PE=1 SV=1
Length = 1929
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSV 192
LL C + HI CL+PPL + P +W CPRC C + G + +
Sbjct: 443 LLCCDSCPSSYHIHCLNPPLPEIPNGEWICPRCTCPSMKGKVQKI 487
Score = 28.5 bits (62), Expect(2) = 9e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 428 DHHMEFCRVCKDGGELLCC 446
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP + AP W CP C
Sbjct: 372 CPRAYHMVCLDPDMEKAPEGTWSCPHC 398
Score = 23.9 bits (50), Expect(2) = 0.092
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 352 DHQDYCEVCQQGGEIILC 369
>tr|Q2KMK9|Q2KMK9_RAT Chromodomain helicase DNA-binding protein 3
short isoform (Fragment) OS=Rattus norvegicus GN=Chd3
PE=2 SV=1
Length = 1927
Score = 47.8 bits (112), Expect(2) = 9e-07
Identities = 23/54 (42%), Positives = 28/54 (51%)
Frame = +1
Query: 58 LLTGKDCKITLHIDCLDPPLRDAPPNDWYCPRCACKRIYGGMHSVSKGIESIWG 219
LL C + HI CL+PPL D P +W CPRC C + G V K + WG
Sbjct: 426 LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKG---RVQKILHWRWG 476
Score = 28.5 bits (62), Expect(2) = 9e-07
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 5 DNHDSVCNKCKQEGQLICC 61
D+H C CK G+L+CC
Sbjct: 411 DDHMEYCRVCKDGGELLCC 429
Score = 35.0 bits (79), Expect(2) = 0.092
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 76 CKITLHIDCLDPPLRDAPPNDWYCPRC 156
C H+ CLDP L AP W CP C
Sbjct: 356 CPRAYHLVCLDPELDRAPEGKWSCPHC 382
Score = 23.9 bits (50), Expect(2) = 0.092
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 8 NHDSVCNKCKQEGQLICC 61
+H C C+Q G++I C
Sbjct: 336 DHQDYCEVCQQGGEIILC 353
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