BP913421
Clone id YMU001_000030_A10
Library
Length 502
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCATGTGGTAGATGGGACAAAATTACTCCAAAGGGCAAAGTCTTTGCAGAAGAACTCTAG
AAAATGGATGTGTATAGCCATTATTATTCTGCTAATTATCATAGTCATTATAGTGGTGGC
AGTTCTGCAGCCTTGGAAGAGTAAGCAGGCGTAAATGAGCTGCAGAGGAAATGGTGATTG
TCTTTCTTACCTGTCTTTGCTTAACGTAGGATATAAAAGAGCCAATGCTTGCCGGTGTCT
CATTTATGATTGGAAGAGCTAATATATAGTTGACCCAGGGATGAAGTCACGAAGAAAGCA
TAAAACTACAGTGTGCGTCGTATTTTTTTCAGCCTCTAGATTTATTCTTTGTGGGCACAT
GTGTGGGCTTGCTGTGTCCTTCTCAAAGACAAAGTAGGCAGCATTTGTTGCTCCTCGTCA
TTGTATAAGTCTTCTTTTAAGAGTCGACACTCCTTGTGCGATGCGAGCTGTGGCAACTCT
TGTTGTCATGCTCTCACTTGTA
■■Homology search results ■■ -
sp_hit_id Q8VZU2
Definition sp|Q8VZU2|SY132_ARATH Syntaxin-132 OS=Arabidopsis thaliana
Align length 50
Score (bit) 49.3
E-value 1.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913421|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_A10.
(502 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8VZU2|SY132_ARATH Syntaxin-132 OS=Arabidopsis thaliana GN=SY... 49 1e-05
sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE OS=Arabido... 36 0.12
sp|Q9SRV7|SY131_ARATH Putative syntaxin-131 OS=Arabidopsis thali... 33 0.75
sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thalia... 32 2.2
sp|Q9ZQZ8|SY123_ARATH Syntaxin-123 OS=Arabidopsis thaliana GN=SY... 30 4.9
sp|Q9ZSD4|SY121_ARATH Syntaxin-121 OS=Arabidopsis thaliana GN=SY... 30 4.9
sp|P35993|HOX7P_XENLA Homeobox protein XHOX-7.1' (Fragment) OS=X... 30 6.3
sp|A4VX47|MURC_STRSY UDP-N-acetylmuramate--L-alanine ligase OS=S... 30 8.3
sp|A4W3F1|MURC_STRS2 UDP-N-acetylmuramate--L-alanine ligase OS=S... 30 8.3
sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicali... 30 8.3
sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN... 30 8.3
sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus G... 30 8.3
sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=H... 30 8.3
sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=H... 30 8.3
sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=H... 30 8.3
sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=... 30 8.3

>sp|Q8VZU2|SY132_ARATH Syntaxin-132 OS=Arabidopsis thaliana
GN=SYP132 PE=1 SV=1
Length = 304

Score = 49.3 bits (116), Expect = 1e-05
Identities = 24/50 (48%), Positives = 26/50 (52%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSKQA 151
HV G LQRAKSLQKNSRKWMC +PWK+K A
Sbjct: 255 HVQSGNTALQRAKSLQKNSRKWMCIAIIILLIVVAVIVVGVLKPWKNKSA 304


>sp|Q42374|SY111_ARATH Syntaxin-related protein KNOLLE
OS=Arabidopsis thaliana GN=KN PE=1 SV=1
Length = 310

Score = 35.8 bits (81), Expect = 0.12
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMC 73
+V DG L+ AKS Q+NSRKWMC
Sbjct: 263 YVADGANELKTAKSHQRNSRKWMC 286


>sp|Q9SRV7|SY131_ARATH Putative syntaxin-131 OS=Arabidopsis thaliana
GN=SYP131 PE=2 SV=1
Length = 306

Score = 33.1 bits (74), Expect = 0.75
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSK 145
HV G L +A QK+SRKWMC +PW K
Sbjct: 256 HVQSGNNQLTKAVKSQKSSRKWMCIAILILLIIIIITVISVLKPWTQK 303


>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana
GN=HDA7 PE=2 SV=1
Length = 409

Score = 31.6 bits (70), Expect = 2.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
Frame = +2

Query: 155 MSCRGNGDCLSYLSLLNV--------GYKRANACRCLIYD 250
+S +G+GDCL Y+ NV GY N RC Y+
Sbjct: 279 LSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYE 318


>sp|Q9ZQZ8|SY123_ARATH Syntaxin-123 OS=Arabidopsis thaliana
GN=SYP123 PE=2 SV=1
Length = 305

Score = 30.4 bits (67), Expect = 4.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +2

Query: 5 VVDGTKLLQRAKSLQKNSRKWMC 73
V+ GT L AK LQ+N+RKW C
Sbjct: 258 VMRGTDQLHGAKVLQRNNRKWAC 280


>sp|Q9ZSD4|SY121_ARATH Syntaxin-121 OS=Arabidopsis thaliana
GN=SYP121 PE=1 SV=1
Length = 346

Score = 30.4 bits (67), Expect = 4.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2

Query: 14 GTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKS 142
GT LQ A+ QKN+RKW C +PW +
Sbjct: 269 GTDQLQTARVYQKNTRKWTCIAIIILIIIITVVVLAVLKPWNN 311


>sp|P35993|HOX7P_XENLA Homeobox protein XHOX-7.1' (Fragment)
OS=Xenopus laevis PE=2 SV=1
Length = 291

Score = 30.0 bits (66), Expect = 6.3
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3

Query: 473 PQLASHKECRLLKEDLYNDEEQQMLPTLS 387
P L + R +KEDL +DEE Q+ PTLS
Sbjct: 24 PLLTAMSSPRRIKEDLSSDEEGQVHPTLS 52


>sp|A4VX47|MURC_STRSY UDP-N-acetylmuramate--L-alanine ligase
OS=Streptococcus suis (strain 05ZYH33) GN=murC PE=3 SV=1
Length = 443

Score = 29.6 bits (65), Expect = 8.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2

Query: 417 RGATNAAYFVFEKDTASPHMCP 352
RG+ NA YFVFE D H P
Sbjct: 141 RGSANAQYFVFESDEYERHFAP 162


>sp|A4W3F1|MURC_STRS2 UDP-N-acetylmuramate--L-alanine ligase
OS=Streptococcus suis (strain 98HAH33) GN=murC PE=3 SV=1
Length = 443

Score = 29.6 bits (65), Expect = 8.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2

Query: 417 RGATNAAYFVFEKDTASPHMCP 352
RG+ NA YFVFE D H P
Sbjct: 141 RGSANAQYFVFESDEYERHFAP 162


>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis
GN=hdac3 PE=2 SV=1
Length = 428

Score = 29.6 bits (65), Expect = 8.3
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
Frame = +2

Query: 155 MSCRGNGDCLSYLSLLNV--------GYKRANACRCLIYD 250
+S RG+G+C+ Y+ N+ GY N RC Y+
Sbjct: 271 LSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYE 310


tr_hit_id B7FJA0
Definition tr|B7FJA0|B7FJA0_MEDTR Putative uncharacterized protein OS=Medicago truncatula
Align length 47
Score (bit) 44.3
E-value 0.003
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913421|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_A10.
(502 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7FJA0|B7FJA0_MEDTR Putative uncharacterized protein OS=Medic... 44 0.003
tr|Q7XIE2|Q7XIE2_ORYSJ Os07g0164300 protein OS=Oryza sativa subs... 44 0.006
tr|B8B7K4|B8B7K4_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.006
tr|B6U7P5|B6U7P5_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1 44 0.006
tr|A3BGV6|A3BGV6_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.006
tr|B6TDM3|B6TDM3_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1 42 0.013
tr|B4FXJ1|B4FXJ1_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.013
tr|A8HUY7|A8HUY7_CHLRE Qa-SNARE Sso1/Syntaxin1, PM-type OS=Chlam... 40 0.048
tr|A7Q015|A7Q015_VITVI Chromosome chr8 scaffold_41, whole genome... 40 0.081
tr|A5B9I1|A5B9I1_VITVI Putative uncharacterized protein OS=Vitis... 40 0.081
tr|A9T417|A9T417_PHYPA Qa-SNARE, Sso1/Syntaxin1-type, SYP13 grou... 39 0.14
tr|Q5VRF6|Q5VRF6_ORYSJ Os06g0168500 protein OS=Oryza sativa subs... 39 0.18
tr|B8BCZ1|B8BCZ1_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.18
tr|A3B8S7|A3B8S7_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.18
tr|Q9SML5|Q9SML5_CAPAN Knolle OS=Capsicum annuum GN=kn PE=2 SV=1 35 2.6
tr|A5UZ93|A5UZ93_ROSS1 Undecaprenyl-diphosphatase OS=Roseiflexus... 34 4.5
tr|A8RH57|A8RH57_9TYRA NADH-ubiquinone oxidoreductase chain 2 (F... 33 7.6
tr|A8RH47|A8RH47_9TYRA NADH-ubiquinone oxidoreductase chain 2 (F... 33 7.6
tr|A9P217|A9P217_PICSI Putative uncharacterized protein OS=Picea... 33 7.6
tr|A4S8S3|A4S8S3_OSTLU Predicted protein OS=Ostreococcus lucimar... 33 7.6
tr|A5C3F0|A5C3F0_VITVI Putative uncharacterized protein OS=Vitis... 33 9.9

>tr|B7FJA0|B7FJA0_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 307

Score = 44.3 bits (103), Expect = 0.003
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKS 142
HV GT LQ AK LQKNSRKWMC +PWKS
Sbjct: 260 HVQRGTTALQSAKKLQKNSRKWMCIAIIILLIIVAIIVVGVLKPWKS 306


>tr|Q7XIE2|Q7XIE2_ORYSJ Os07g0164300 protein OS=Oryza sativa subsp.
japonica GN=P0039H02.103 PE=2 SV=1
Length = 303

Score = 43.5 bits (101), Expect = 0.006
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139
H+ G LQ AK LQKNSRKWMC QPWK
Sbjct: 255 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWK 300


>tr|B8B7K4|B8B7K4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_25009 PE=4 SV=1
Length = 303

Score = 43.5 bits (101), Expect = 0.006
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139
H+ G LQ AK LQKNSRKWMC QPWK
Sbjct: 255 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWK 300


>tr|B6U7P5|B6U7P5_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1
Length = 304

Score = 43.5 bits (101), Expect = 0.006
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139
H+ G LQ AK LQKNSRKWMC QPWK
Sbjct: 256 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLVIVAVIVVAVIQPWK 301


>tr|A3BGV6|A3BGV6_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_022278 PE=3 SV=1
Length = 321

Score = 43.5 bits (101), Expect = 0.006
Identities = 20/46 (43%), Positives = 21/46 (45%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139
H+ G LQ AK LQKNSRKWMC QPWK
Sbjct: 273 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWK 318


>tr|B6TDM3|B6TDM3_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1
Length = 304

Score = 42.4 bits (98), Expect = 0.013
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139
H+ G LQ AK LQ+NSRKWMC QPWK
Sbjct: 256 HIQQGVSALQNAKKLQRNSRKWMCYAIIILLVIVVVIVVAVIQPWK 301


>tr|B4FXJ1|B4FXJ1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=4 SV=1
Length = 75

Score = 42.4 bits (98), Expect = 0.013
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139
H+ G LQ AK LQ+NSRKWMC QPWK
Sbjct: 27 HIQQGVSALQNAKKLQRNSRKWMCYAIIILLVIVVVIVVAVIQPWK 72


>tr|A8HUY7|A8HUY7_CHLRE Qa-SNARE Sso1/Syntaxin1, PM-type
OS=Chlamydomonas reinhardtii GN=SYP1 PE=3 SV=1
Length = 311

Score = 40.4 bits (93), Expect = 0.048
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSKQ 148
+V GT+ LQ AK LQKN+RKWMC +PWK Q
Sbjct: 263 YVKGGTEALQDAKQLQKNTRKWMCCAIMIMLIVALVIVLAVVRPWKYLQ 311


>tr|A7Q015|A7Q015_VITVI Chromosome chr8 scaffold_41, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00027097001
PE=3 SV=1
Length = 307

Score = 39.7 bits (91), Expect = 0.081
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSKQA 151
HV G LQRAK LQ++SRKWMC +PW A
Sbjct: 258 HVQSGNTALQRAKKLQRSSRKWMCIAIIILLIIVVIIVVAVLKPWSKNGA 307


>tr|A5B9I1|A5B9I1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_030563 PE=4 SV=1
Length = 204

Score = 39.7 bits (91), Expect = 0.081
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2

Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSKQA 151
HV G LQRAK LQ++SRKWMC +PW A
Sbjct: 155 HVQSGNTALQRAKKLQRSSRKWMCIAIIILLIIVVIIVVAVLKPWSKNGA 204