BP913421 |
Clone id |
YMU001_000030_A10 |
Library |
YMU01 |
Length |
502 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000030_A10. |
Accession |
BP913421 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1219Contig1 |
Sequence |
GCATGTGGTAGATGGGACAAAATTACTCCAAAGGGCAAAGTCTTTGCAGAAGAACTCTAG AAAATGGATGTGTATAGCCATTATTATTCTGCTAATTATCATAGTCATTATAGTGGTGGC AGTTCTGCAGCCTTGGAAGAGTAAGCAGGCGTAAATGAGCTGCAGAGGAAATGGTGATTG TCTTTCTTACCTGTCTTTGCTTAACGTAGGATATAAAAGAGCCAATGCTTGCCGGTGTCT CATTTATGATTGGAAGAGCTAATATATAGTTGACCCAGGGATGAAGTCACGAAGAAAGCA TAAAACTACAGTGTGCGTCGTATTTTTTTCAGCCTCTAGATTTATTCTTTGTGGGCACAT GTGTGGGCTTGCTGTGTCCTTCTCAAAGACAAAGTAGGCAGCATTTGTTGCTCCTCGTCA TTGTATAAGTCTTCTTTTAAGAGTCGACACTCCTTGTGCGATGCGAGCTGTGGCAACTCT TGTTGTCATGCTCTCACTTGTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8VZU2 |
Definition |
sp|Q8VZU2|SY132_ARATH Syntaxin-132 OS=Arabidopsis thaliana |
Align length |
50 |
Score (bit) |
49.3 |
E-value |
1.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7FJA0 |
Definition |
tr|B7FJA0|B7FJA0_MEDTR Putative uncharacterized protein OS=Medicago truncatula |
Align length |
47 |
Score (bit) |
44.3 |
E-value |
0.003 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913421|Adiantum capillus-veneris mRNA, clone: YMU001_000030_A10. (502 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7FJA0|B7FJA0_MEDTR Putative uncharacterized protein OS=Medic... 44 0.003 tr|Q7XIE2|Q7XIE2_ORYSJ Os07g0164300 protein OS=Oryza sativa subs... 44 0.006 tr|B8B7K4|B8B7K4_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.006 tr|B6U7P5|B6U7P5_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1 44 0.006 tr|A3BGV6|A3BGV6_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.006 tr|B6TDM3|B6TDM3_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1 42 0.013 tr|B4FXJ1|B4FXJ1_MAIZE Putative uncharacterized protein OS=Zea m... 42 0.013 tr|A8HUY7|A8HUY7_CHLRE Qa-SNARE Sso1/Syntaxin1, PM-type OS=Chlam... 40 0.048 tr|A7Q015|A7Q015_VITVI Chromosome chr8 scaffold_41, whole genome... 40 0.081 tr|A5B9I1|A5B9I1_VITVI Putative uncharacterized protein OS=Vitis... 40 0.081 tr|A9T417|A9T417_PHYPA Qa-SNARE, Sso1/Syntaxin1-type, SYP13 grou... 39 0.14 tr|Q5VRF6|Q5VRF6_ORYSJ Os06g0168500 protein OS=Oryza sativa subs... 39 0.18 tr|B8BCZ1|B8BCZ1_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.18 tr|A3B8S7|A3B8S7_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.18 tr|Q9SML5|Q9SML5_CAPAN Knolle OS=Capsicum annuum GN=kn PE=2 SV=1 35 2.6 tr|A5UZ93|A5UZ93_ROSS1 Undecaprenyl-diphosphatase OS=Roseiflexus... 34 4.5 tr|A8RH57|A8RH57_9TYRA NADH-ubiquinone oxidoreductase chain 2 (F... 33 7.6 tr|A8RH47|A8RH47_9TYRA NADH-ubiquinone oxidoreductase chain 2 (F... 33 7.6 tr|A9P217|A9P217_PICSI Putative uncharacterized protein OS=Picea... 33 7.6 tr|A4S8S3|A4S8S3_OSTLU Predicted protein OS=Ostreococcus lucimar... 33 7.6 tr|A5C3F0|A5C3F0_VITVI Putative uncharacterized protein OS=Vitis... 33 9.9
>tr|B7FJA0|B7FJA0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 307
Score = 44.3 bits (103), Expect = 0.003 Identities = 22/47 (46%), Positives = 23/47 (48%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKS 142 HV GT LQ AK LQKNSRKWMC +PWKS Sbjct: 260 HVQRGTTALQSAKKLQKNSRKWMCIAIIILLIIVAIIVVGVLKPWKS 306
>tr|Q7XIE2|Q7XIE2_ORYSJ Os07g0164300 protein OS=Oryza sativa subsp. japonica GN=P0039H02.103 PE=2 SV=1 Length = 303
Score = 43.5 bits (101), Expect = 0.006 Identities = 20/46 (43%), Positives = 21/46 (45%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139 H+ G LQ AK LQKNSRKWMC QPWK Sbjct: 255 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWK 300
>tr|B8B7K4|B8B7K4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25009 PE=4 SV=1 Length = 303
Score = 43.5 bits (101), Expect = 0.006 Identities = 20/46 (43%), Positives = 21/46 (45%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139 H+ G LQ AK LQKNSRKWMC QPWK Sbjct: 255 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWK 300
>tr|B6U7P5|B6U7P5_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1 Length = 304
Score = 43.5 bits (101), Expect = 0.006 Identities = 20/46 (43%), Positives = 21/46 (45%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139 H+ G LQ AK LQKNSRKWMC QPWK Sbjct: 256 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLVIVAVIVVAVIQPWK 301
>tr|A3BGV6|A3BGV6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022278 PE=3 SV=1 Length = 321
Score = 43.5 bits (101), Expect = 0.006 Identities = 20/46 (43%), Positives = 21/46 (45%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139 H+ G LQ AK LQKNSRKWMC QPWK Sbjct: 273 HIQQGVSALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWK 318
>tr|B6TDM3|B6TDM3_MAIZE Syntaxin 132 OS=Zea mays PE=2 SV=1 Length = 304
Score = 42.4 bits (98), Expect = 0.013 Identities = 19/46 (41%), Positives = 21/46 (45%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139 H+ G LQ AK LQ+NSRKWMC QPWK Sbjct: 256 HIQQGVSALQNAKKLQRNSRKWMCYAIIILLVIVVVIVVAVIQPWK 301
>tr|B4FXJ1|B4FXJ1_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 75
Score = 42.4 bits (98), Expect = 0.013 Identities = 19/46 (41%), Positives = 21/46 (45%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWK 139 H+ G LQ AK LQ+NSRKWMC QPWK Sbjct: 27 HIQQGVSALQNAKKLQRNSRKWMCYAIIILLVIVVVIVVAVIQPWK 72
>tr|A8HUY7|A8HUY7_CHLRE Qa-SNARE Sso1/Syntaxin1, PM-type OS=Chlamydomonas reinhardtii GN=SYP1 PE=3 SV=1 Length = 311
Score = 40.4 bits (93), Expect = 0.048 Identities = 20/49 (40%), Positives = 24/49 (48%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSKQ 148 +V GT+ LQ AK LQKN+RKWMC +PWK Q Sbjct: 263 YVKGGTEALQDAKQLQKNTRKWMCCAIMIMLIVALVIVLAVVRPWKYLQ 311
>tr|A7Q015|A7Q015_VITVI Chromosome chr8 scaffold_41, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027097001 PE=3 SV=1 Length = 307
Score = 39.7 bits (91), Expect = 0.081 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSKQA 151 HV G LQRAK LQ++SRKWMC +PW A Sbjct: 258 HVQSGNTALQRAKKLQRSSRKWMCIAIIILLIIVVIIVVAVLKPWSKNGA 307
>tr|A5B9I1|A5B9I1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030563 PE=4 SV=1 Length = 204
Score = 39.7 bits (91), Expect = 0.081 Identities = 19/50 (38%), Positives = 22/50 (44%) Frame = +2
Query: 2 HVVDGTKLLQRAKSLQKNSRKWMCXXXXXXXXXXXXXXXXXXQPWKSKQA 151 HV G LQRAK LQ++SRKWMC +PW A Sbjct: 155 HVQSGNTALQRAKKLQRSSRKWMCIAIIILLIIVVIIVVAVLKPWSKNGA 204
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