BP913427
Clone id YMU001_000030_B04
Library
Length 547
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CATTCACAATCATTGTGATTGCCTGAAGAGTCAAAACAACAATGCACAAACTTGCCTGCG
AGCAATGCATTGGTCTACACCGATTCATGATGGGATCATATTCATGGCCTAAAAAGTGGA
TGAAAAAGCTAAGCCCATGCAGAAGGATGGGCAGATCCGAGATCACAACCTTGTAGACCT
ACAACTGAGTAGGACATCAGACAGATCTTCCAATTATAGGTCCATCAATTACTTCTGCGC
CTCCAAACCTGGCTGCGCTTTACAAGAAGCCATGTCATGAAGGGTATTGAGAATTATGGT
GCTTCTCTGCAGAGACCGGACAGGCTGCCCACGTCTACAGAGGGTTTATCTTCACTGATG
GGATGACAGTCGCTTTTATTATAATCAGGTTTGAGTAATTCGCCGTCAACATTATTAATA
GTTGTCTCATCCGCTTGAGAACCATGTCCTTCAAACTCTCTCAAATGTTTTGGAGTATAA
GCCTCTTTAGATCTGACCCCCCTTGCAGCAGTATAATCAACTGACGAGTACCTGCAGGTA
ATATCTC
■■Homology search results ■■ -
sp_hit_id Q6ZV19
Definition sp|Q6ZV19|YF004_HUMAN Putative uncharacterized protein LOC401258 OS=Homo sapiens
Align length 49
Score (bit) 31.2
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913427|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_B04.
(547 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ZV19|YF004_HUMAN Putative uncharacterized protein LOC401258... 31 3.4
sp|P36104|SWD2_YEAST COMPASS component SWD2 OS=Saccharomyces cer... 31 4.4
sp|Q7UXH9|SYV_RHOBA Valyl-tRNA synthetase OS=Rhodopirellula balt... 30 7.7

>sp|Q6ZV19|YF004_HUMAN Putative uncharacterized protein LOC401258
OS=Homo sapiens PE=2 SV=1
Length = 183

Score = 31.2 bits (69), Expect = 3.4
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = -3

Query: 284 PFMTWLLVKRSQVWRRRSN*WTYNWKICLMSYSVVGLQGCDLGSAHPSA 138
P +LL SQ+WRRR + L S+S G+Q C LGS HP A
Sbjct: 37 PLSGYLLPPASQLWRRR---MLRRRRRSLPSWSSWGVQ-CRLGSQHPGA 81


>sp|P36104|SWD2_YEAST COMPASS component SWD2 OS=Saccharomyces
cerevisiae GN=SWD2 PE=1 SV=1
Length = 329

Score = 30.8 bits (68), Expect = 4.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -3

Query: 476 TPKHLREFEGHGSQADETTINNVDGELLKPDYNKS-DCHPISEDKPSVDVGSLSGLC 309
T ++LR F GHG+ ++ +N V+ L Y++S + KP V + SL C
Sbjct: 102 TNQYLRYFSGHGALVNDLKMNPVNDTFLSSSYDESVRLWDLKISKPQVIIPSLVPNC 158


>sp|Q7UXH9|SYV_RHOBA Valyl-tRNA synthetase OS=Rhodopirellula baltica
GN=valS PE=3 SV=2
Length = 1035

Score = 30.0 bits (66), Expect = 7.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = -1

Query: 493 DLKRLILQNI*ESLKDMVLKRMRQLLIMLTA---NYSNLIIIKATVIPSVKINPL*TWAA 323
D +R I QN+ D +L+ + ++ +T N+ I K V ++ P A+
Sbjct: 803 DSQRQIAQNVIAHGLDQLLRLLHPIMPFVTESVWNHLGQIAPKRGVPEPAEVGPFVMTAS 862

Query: 322 CPVSAEKHHNSQ 287
PV+ E HH+S+
Sbjct: 863 FPVADESHHDSK 874


tr_hit_id Q08WL6
Definition tr|Q08WL6|Q08WL6_STIAU Phosphate ABC transporter, permease protein PstA OS=Stigmatella aurantiaca DW4/3-1
Align length 46
Score (bit) 35.0
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913427|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_B04.
(547 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q08WL6|Q08WL6_STIAU Phosphate ABC transporter, permease prote... 35 2.6
tr|Q7Q172|Q7Q172_ANOGA AGAP009937-PA (Fragment) OS=Anopheles gam... 33 9.9
tr|A8Q5W0|A8Q5W0_MALGO Putative uncharacterized protein OS=Malas... 33 9.9

>tr|Q08WL6|Q08WL6_STIAU Phosphate ABC transporter, permease protein
PstA OS=Stigmatella aurantiaca DW4/3-1 GN=pstA PE=3 SV=1
Length = 303

Score = 35.0 bits (79), Expect = 2.6
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = -1

Query: 142 LHGLSFFIHFLGHEYDPIMNRCRPMHCSQASLCIVVLTLQAITMIV 5
L GL FFIHF+G D +M + MH +Q S+ LTL +T+ V
Sbjct: 121 LFGLGFFIHFVGGGMDRMMG-YQTMHWAQPSILWASLTLAVLTLPV 165


>tr|Q7Q172|Q7Q172_ANOGA AGAP009937-PA (Fragment) OS=Anopheles
gambiae GN=AGAP009937 PE=4 SV=4
Length = 1520

Score = 33.1 bits (74), Expect = 9.9
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -3

Query: 521 VDYTAARGVRSKEAYTPKHLREFEGHGSQADETTINNVD 405
+DY A SK +TP HL EGHG A N D
Sbjct: 615 LDYKADANAESKTGFTPLHLSAQEGHGDMARVLLDNGAD 653


>tr|A8Q5W0|A8Q5W0_MALGO Putative uncharacterized protein
OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
GN=MGL_2822 PE=4 SV=1
Length = 1063

Score = 33.1 bits (74), Expect = 9.9
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = -3

Query: 542 ITCRYSSVDYTAARGVRSKEAYTPKHLREFEGHGSQADETTINNVDGELLKPDYNKSD-- 369
+ CRY +D + + + P+HLR +GH NN+DG + + D ++ D
Sbjct: 315 VWCRYLRIDSSLSEPYVAMLLEMPEHLRIADGHA--------NNIDGSIARHDEDEKDDD 366

Query: 368 ----CHPISEDKPSVDVGSLSGLCREA 300
P+ E + + GL R A
Sbjct: 367 DDDSLTPVQERRVLEAAKRMLGLARSA 393