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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913428
Clone id YMU001_000030_B05
Library
Length 447
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGTCTTACTCATTTTATATCAATTACAAGGATACTTCCAGGCCTCGTATGAAAAGAAGAA
AGTCTTAAGGGCGGATAACCGGAAAGAATGGCAGGATCTGAATGAAATGAAAGGACAGGA
TACTTGCTGGGAGCACAATACTTCTGGTGCATTGCAGGCTGCTTGTTATATGCATTCAGG
ATGACAAGAAGAATTTAGAATTTAGATGGCCTGCAACCAAGGGACGATCTAGTGAACGGC
ACAATGAACAATGCAGATAATTGACTGCGCTAGGTCGCAATGTCAAAATGTAGTTTCTTT
ACAAGCCCTGATAAGCAGGGGTTTGGAAACTAGTAAACGGACTCCAAAATATCAATGCTT
TCCTTGCTACTTGCAAGTCGTAATAGAGGCAAACGGAACTCTGTAACTCGGTAAAGAAGG
GCAAAGGGAGTCTTCTCCAATCTGTGC
■■Homology search results ■■ -
sp_hit_id Q9RWG3
Definition sp|Q9RWG3|Y705_DEIRA Uncharacterized protein DR_0705 OS=Deinococcus radiodurans
Align length 39
Score (bit) 30.0
E-value 4.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913428|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_B05.
         (447 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9RWG3|Y705_DEIRA Uncharacterized protein DR_0705 OS=Deinococ...    30   4.6  
sp|P41882|YPT4_CAEEL Ankyrin repeat-containing protein F37A4.4 O...    30   6.0  

>sp|Q9RWG3|Y705_DEIRA Uncharacterized protein DR_0705 OS=Deinococcus
           radiodurans GN=DR_0705 PE=4 SV=1
          Length = 308

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 131 PSKYPVLSFHSDPAI-LSGYPPLRLSSFHTRPGSILVID 18
           PSK P LS      + L+GY   RL++ HT P  ++V+D
Sbjct: 41  PSKKPALSAVQHWGVQLTGYGQTRLNAVHTSPFELVVVD 79


>sp|P41882|YPT4_CAEEL Ankyrin repeat-containing protein F37A4.4
           OS=Caenorhabditis elegans GN=F37A4.4 PE=2 SV=2
          Length = 1163

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -2

Query: 182 ILNAYNKQPAMHQKYCAPSKYPVLSFH 102
           I + YNK      K C P K+PV SFH
Sbjct: 915 IESIYNKYRKKKFKLCVPEKFPVSSFH 941
tr_hit_id B7RPC7
Definition tr|B7RPC7|B7RPC7_9RHOB Cell division septal protein FtsQ OS=Roseobacter sp. GAI101
Align length 106
Score (bit) 36.6
E-value 0.63
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913428|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_B05.
         (447 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7RPC7|B7RPC7_9RHOB Cell division septal protein FtsQ OS=Rose...    37   0.63 
tr|A1D7N2|A1D7N2_NEOFI F-box and JmjC domain protein, putative O...    36   1.1  
tr|Q5LU56|Q5LU56_SILPO Cell division protein ftsQ OS=Silicibacte...    34   4.1  
tr|B6VS08|B6VS08_9BACE Putative uncharacterized protein OS=Bacte...    33   7.0  
tr|A4F1E5|A4F1E5_9RHOB Cell division protein ftsQ OS=Roseobacter...    33   7.0  
tr|A7SY60|A7SY60_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.0  
tr|A7SY53|A7SY53_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.0  
tr|A7SY42|A7SY42_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.0  
tr|A7SY37|A7SY37_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.0  
tr|A7SKB7|A7SKB7_NEMVE Predicted protein (Fragment) OS=Nematoste...    33   7.0  
tr|A1CJT6|A1CJT6_ASPCL F-box and JmjC domain protein, putative O...    33   7.0  
tr|Q4T943|Q4T943_TETNG Chromosome 16 SCAF7644, whole genome shot...    33   9.1  

>tr|B7RPC7|B7RPC7_9RHOB Cell division septal protein FtsQ
           OS=Roseobacter sp. GAI101 GN=ftsQ PE=4 SV=1
          Length = 295

 Score = 36.6 bits (83), Expect = 0.63
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
 Frame = -2

Query: 317 CLSGLVKKLHFDIAT*RSQLSALFIVPFTRSSLGCRPSKF*ILLVILNAYNKQPAMHQKY 138
           CLS +   ++      R+Q++ ++    TR+S+  RP +F + L+ ++    Q A   + 
Sbjct: 47  CLSLIAGTIYLSDDARRAQITDIYTN--TRASIEQRP-EFMVKLMAIDGVKDQLAADVRA 103

Query: 137 CAPSKYPVLSFHSD----PAILSGYPPLRLSSFHTRPGSILVIDIK 12
             P ++P  SF  D     A L   P ++ ++   +PG +L +D++
Sbjct: 104 AVPVEFPTSSFDLDLPAMRATLMALPGVKQATLRIKPGGLLHVDVQ 149


>tr|A1D7N2|A1D7N2_NEOFI F-box and JmjC domain protein, putative
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_068970 PE=4 SV=1
          Length = 505

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = -3

Query: 361 KALIFWSPFTSFQTPAYQGL*RNYILTLRPSAVNYLHCS--LCRSLDRPLVAGHLNSKFF 188
           KAL  WSP +SF    ++G  R+  L L PS V  L CS     +L RP    H++   +
Sbjct: 103 KALFVWSPPSSF---TWRGTWRSTYLNLPPSKVAILDCSSLFSDALHRPFYCAHISLDAY 159

Query: 187 LSS*MHITSSLQCTR 143
           ++   +I S  Q TR
Sbjct: 160 VN---NIPSRNQITR 171


>tr|Q5LU56|Q5LU56_SILPO Cell division protein ftsQ OS=Silicibacter
           pomeroyi GN=SPO1202 PE=4 SV=1
          Length = 335

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
 Frame = -2

Query: 230 RSSLGCRPSKF*ILLVILNAYNKQPAMHQKYCAPSKYPVLSFHSDPA----ILSGYPPLR 63
           R+S+  RP +F + L+ ++      A   +  AP  +P+ SF  D      +++G  P++
Sbjct: 112 RASIQDRP-EFMVNLMAIDGAGTHLAADIREVAPIDFPISSFDLDVEQIRQVIAGLDPVK 170

Query: 62  LSSFHTRPGSILVIDI 15
            ++   RPG +L +D+
Sbjct: 171 SATVRIRPGGVLQVDV 186


>tr|B6VS08|B6VS08_9BACE Putative uncharacterized protein
           OS=Bacteroides dorei DSM 17855 GN=BACDOR_00047 PE=4 SV=1
          Length = 671

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +2

Query: 23  LQGYFQASYEKKKVLRADNRKEWQDLNEMKGQDT 124
           L  Y +A YEK   L AD RK W  L E  G  T
Sbjct: 472 LLNYMEACYEKNGTLDADARKYWMQLRERAGVST 505


>tr|A4F1E5|A4F1E5_9RHOB Cell division protein ftsQ OS=Roseobacter
           sp. SK209-2-6 GN=RSK20926_15892 PE=4 SV=1
          Length = 296

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = -2

Query: 230 RSSLGCRPSKF*ILLVILNAYNKQPAMHQKYCAPSKYPVLSFHSDPAIL----SGYPPLR 63
           R S+  RP +F + ++ ++      A   +   P  +P+ SF  D A +     G  P++
Sbjct: 73  RMSIEQRP-EFMVNVLAIDGVGSSVAQDVREVVPIDFPISSFDLDLAQIREEIEGLDPVK 131

Query: 62  LSSFHTRPGSILVIDIK 12
            +    RPG +L ID+K
Sbjct: 132 SADVRIRPGGVLQIDVK 148


>tr|A7SY60|A7SY60_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g41491 PE=3 SV=1
          Length = 294

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +2

Query: 56  KKVLRADNRKEWQD---LNEMKGQDTC---WEHNTSGALQAACYMHSG 181
           K++    ++ +W+D   +N  KGQ TC   W   T+GA++AA ++  G
Sbjct: 86  KRMFEVPDQLDWRDYGAVNPAKGQGTCGSCWAFATAGAVEAAHFIQKG 133


>tr|A7SY53|A7SY53_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g137486 PE=3 SV=1
          Length = 306

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +2

Query: 56  KKVLRADNRKEWQD---LNEMKGQDTC---WEHNTSGALQAACYMHSG 181
           K++    ++ +W+D   +N  KGQ TC   W   T+GA++AA ++  G
Sbjct: 86  KRMFEVPDQLDWRDYGAVNPAKGQGTCGSCWAFATAGAVEAAHFIQKG 133


>tr|A7SY42|A7SY42_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g137533 PE=3 SV=1
          Length = 225

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +2

Query: 56  KKVLRADNRKEWQD---LNEMKGQDTC---WEHNTSGALQAACYMHSG 181
           K++    ++ +W+D   +N  KGQ TC   W   T+GA++AA ++  G
Sbjct: 51  KRMFEVPDQLDWRDYGAVNPAKGQGTCGSCWAFATAGAVEAAHFIQKG 98


>tr|A7SY37|A7SY37_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g137519 PE=3 SV=1
          Length = 312

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +2

Query: 56  KKVLRADNRKEWQD---LNEMKGQDTC---WEHNTSGALQAACYMHSG 181
           K++    ++ +W+D   +N  KGQ TC   W   T+GA++AA ++  G
Sbjct: 104 KRMFEVPDQLDWRDYGAVNPAKGQGTCGSCWPFATAGAVEAAHFIQKG 151


>tr|A7SKB7|A7SKB7_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g121463 PE=3 SV=1
          Length = 315

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
 Frame = +2

Query: 56  KKVLRADNRKEWQD---LNEMKGQDTC---WEHNTSGALQAACYMHSG 181
           K++    ++ +W+D   +N  KGQ TC   W   T+GA++AA ++  G
Sbjct: 107 KRMFEVPDQLDWRDYGAVNPAKGQGTCGSCWAFATAGAVEAAHFIQKG 154