BP913448 |
Clone id |
YMU001_000030_D03 |
Library |
YMU01 |
Length |
473 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000030_D03. |
Accession |
BP913448 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAGAATTCGGGCCGCTTTACAGTCTTAAGTTCCACTGTCTTAGGAACCGCTTCAACACAC AGTTGCATAGCGATGCTTTCACAAAAGACCTTTCCATCACTACTGCATTGATTTGCATCA ATGTCAAAACACTTTAAGCTTGCAGGACCTTTACAAGCATTATCACGTAGACATCCTATA TTCTCCACGAGGCTATCAGGCCCAAATGTCCGACATGTATCATCGACTGTACCGTCGAGG AGAGTTGATTGTAGAGATGCACAAGATGTATCATCAACTCTGTCCACGTCATAGGGAACA GACTGTAGAGATTCCTCAGAAAAAATTTCAGCGCCTTGTTGCAGAGCATGGCTCCTATTC ACAGTCCTTTCACCCACTTTTAAGTCGGTGGCATCACTGGACGGCTTTGCAATATTATTG GAGCTCTCGGAACCTTCACAAGCACTCCGGTACATACGACCTGTATGCTCCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46230 |
Definition |
sp|P46230|MUTY_AERHY A/G-specific adenine glycosylase (Fragment) OS=Aeromonas hydrophila |
Align length |
17 |
Score (bit) |
32.7 |
E-value |
0.84 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XPW2 |
Definition |
tr|Q7XPW2|Q7XPW2_ORYSJ OSJNBa0032F06.19 protein OS=Oryza sativa subsp. japonica |
Align length |
83 |
Score (bit) |
38.1 |
E-value |
0.22 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913448|Adiantum capillus-veneris mRNA, clone: YMU001_000030_D03. (473 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XPW2|Q7XPW2_ORYSJ OSJNBa0032F06.19 protein OS=Oryza sativa ... 38 0.22 tr|Q2QZI0|Q2QZI0_ORYSJ Retrotransposon protein, putative, unclas... 38 0.22 tr|Q0J8X5|Q0J8X5_ORYSJ Os04g0682600 protein (Fragment) OS=Oryza ... 38 0.22 tr|Q0IR25|Q0IR25_ORYSJ Os11g0686400 protein OS=Oryza sativa subs... 38 0.22 tr|B5DX41|B5DX41_DROPS GA27115 OS=Drosophila pseudoobscura pseud... 35 1.4 tr|Q1ZF28|Q1ZF28_9GAMM A/G-specific adenine glycosylase OS=Psych... 35 1.9 tr|Q7S0Z6|Q7S0Z6_NEUCR Predicted protein OS=Neurospora crassa GN... 35 2.4 tr|B4G2N5|B4G2N5_DROPE GL23937 OS=Drosophila persimilis GN=GL239... 34 3.2 tr|Q1YPB4|Q1YPB4_9GAMM Adenine glycosylase OS=gamma proteobacter... 34 4.2 tr|B4PUT9|B4PUT9_DROYA GE24161 OS=Drosophila yakuba GN=GE24161 P... 34 4.2 tr|A7TJP8|A7TJP8_VANPO Putative uncharacterized protein OS=Vande... 34 4.2 tr|Q7N7I0|Q7N7I0_PHOLL A/G-specific adenine glycosylase OS=Photo... 33 5.4 tr|Q4K4Q3|Q4K4Q3_PSEF5 Putative uncharacterized protein OS=Pseud... 33 5.4 tr|A8AZ57|A8AZ57_STRGC Transcriptional regulator, Cro/CI family ... 33 5.4 tr|A1SRX2|A1SRX2_PSYIN A/G-specific DNA-adenine glycosylase OS=P... 33 5.4 tr|Q2QLN6|Q2QLN6_ORYSJ Retrotransposon protein, putative, unclas... 33 5.4 tr|B6KII1|B6KII1_TOXGO Putative uncharacterized protein OS=Toxop... 33 5.4 tr|B5B3T0|B5B3T0_SACKO Delta protein OS=Saccoglossus kowalevskii... 33 5.4 tr|B4LXW3|B4LXW3_DROVI GJ22824 OS=Drosophila virilis GN=GJ22824 ... 33 5.4 tr|Q6C690|Q6C690_YARLI YALI0E11495p OS=Yarrowia lipolytica GN=YA... 33 5.4 tr|A1XTA3|A1XTA3_BTMV Polyprotein OS=Beet mosaic virus PE=3 SV=1 33 7.1 tr|Q3ILJ0|Q3ILJ0_PSEHT A/G-specific adenine glycosylase OS=Pseud... 33 7.1 tr|B6VNH8|B6VNH8_9ENTR A/G-specific adenine glycosylase OS=Photo... 33 7.1 tr|B4NRS7|B4NRS7_DROWI GK20273 OS=Drosophila willistoni GN=GK202... 33 7.1 tr|A4RJ99|A4RJ99_MAGGR Putative uncharacterized protein OS=Magna... 33 7.1 tr|A4IIE3|A4IIE3_XENTR Ehmt1 protein OS=Xenopus tropicalis GN=eh... 33 9.3 tr|Q9ILY2|Q9ILY2_BTMV Polyprotein (Fragment) OS=Beet mosaic viru... 33 9.3 tr|Q91S94|Q91S94_BTMV Polyprotein (Fragment) OS=Beet mosaic viru... 33 9.3 tr|Q2L983|Q2L983_BTMV Polyprotein (Fragment) OS=Beet mosaic viru... 33 9.3 tr|A1XTA2|A1XTA2_BTMV Polyprotein OS=Beet mosaic virus PE=3 SV=1 33 9.3
>tr|Q7XPW2|Q7XPW2_ORYSJ OSJNBa0032F06.19 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0032F06.19 PE=4 SV=2 Length = 1575
Score = 38.1 bits (87), Expect = 0.22 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Frame = +2
Query: 209 SDMYHRLYRRGELIVEMHKMYHQLCPRHREQTVEIPQ--KKFQRLVAEHGSYSQSFHPLL 382 S ++ L+RR + M YH P+ QT + Q + F R H Sbjct: 1251 SSLWKELFRRAGTQLRMSSSYH---PQSDGQTERVNQCVEMFLRCFV---------HSCP 1298
Query: 383 SRWHHWTALQYYWSSRNLHKHSG 451 SRW HW AL YW + + H G Sbjct: 1299 SRWKHWLALAQYWYNTSFHSALG 1321
>tr|Q2QZI0|Q2QZI0_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os11g45920 PE=4 SV=2 Length = 2811
Score = 38.1 bits (87), Expect = 0.22 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Frame = +2
Query: 209 SDMYHRLYRRGELIVEMHKMYHQLCPRHREQTVEIPQ--KKFQRLVAEHGSYSQSFHPLL 382 S ++ L+RR + M YH P+ QT + Q + F R H Sbjct: 2487 SSLWKELFRRAGTQLRMSSSYH---PQSDGQTERVNQCVEMFLRCFV---------HSCP 2534
Query: 383 SRWHHWTALQYYWSSRNLHKHSG 451 SRW HW AL YW + + H G Sbjct: 2535 SRWKHWLALAQYWYNTSFHSALG 2557
>tr|Q0J8X5|Q0J8X5_ORYSJ Os04g0682600 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0682600 PE=4 SV=1 Length = 395
Score = 38.1 bits (87), Expect = 0.22 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Frame = +2
Query: 209 SDMYHRLYRRGELIVEMHKMYHQLCPRHREQTVEIPQ--KKFQRLVAEHGSYSQSFHPLL 382 S ++ L+RR + M YH P+ QT + Q + F R H Sbjct: 71 SSLWKELFRRAGTQLRMSSSYH---PQSDGQTERVNQCVEMFLRCFV---------HSCP 118
Query: 383 SRWHHWTALQYYWSSRNLHKHSG 451 SRW HW AL YW + + H G Sbjct: 119 SRWKHWLALAQYWYNTSFHSALG 141
>tr|Q0IR25|Q0IR25_ORYSJ Os11g0686400 protein OS=Oryza sativa subsp. japonica GN=Os11g0686400 PE=4 SV=1 Length = 2866
Score = 38.1 bits (87), Expect = 0.22 Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Frame = +2
Query: 209 SDMYHRLYRRGELIVEMHKMYHQLCPRHREQTVEIPQ--KKFQRLVAEHGSYSQSFHPLL 382 S ++ L+RR + M YH P+ QT + Q + F R H Sbjct: 2542 SSLWKELFRRAGTQLRMSSSYH---PQSDGQTERVNQCVEMFLRCFV---------HSCP 2589
Query: 383 SRWHHWTALQYYWSSRNLHKHSG 451 SRW HW AL YW + + H G Sbjct: 2590 SRWKHWLALAQYWYNTSFHSALG 2612
>tr|B5DX41|B5DX41_DROPS GA27115 OS=Drosophila pseudoobscura pseudoobscura GN=GA27115 PE=4 SV=1 Length = 147
Score = 35.4 bits (80), Expect = 1.4 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Frame = -1
Query: 263 CASLQSTLLDGTVDDTCRTFGPDSLVENIGCLRDNACKGPASL----KCFDIDANQCSSD 96 C+ L+ VD CR + + N C R N C P + KC + +C SD Sbjct: 37 CSPYYKELVWAVVDGVCRVYQNGCIFGNENCTRVNQCLTPMNATSPEKCKEYCPRRCPSD 96
Query: 95 GKVFC 81 G+ C Sbjct: 97 GQEVC 101
>tr|Q1ZF28|Q1ZF28_9GAMM A/G-specific adenine glycosylase OS=Psychromonas sp. CNPT3 GN=PCNPT3_12749 PE=4 SV=1 Length = 356
Score = 35.0 bits (79), Expect = 1.9 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Frame = +2
Query: 218 YHRLYRRGELIVEMHKMYH-----QLCPRHREQTVEIPQ-KKFQRLVAEHGSYSQSFHPL 379 +H LY R L ++ K + ++ + + IP KKF R + + PL Sbjct: 13 WHTLYGRKSLPWQIDKSLYKTWISEIMLQQTQVITVIPYFKKFMRAFPNITYLANA--PL 70
Query: 380 LSRWHHWTALQYYWSSRNLHK 442 HHWT L YY +RNLHK Sbjct: 71 DEVLHHWTGLGYYARARNLHK 91
>tr|Q7S0Z6|Q7S0Z6_NEUCR Predicted protein OS=Neurospora crassa GN=NCU09148 PE=4 SV=1 Length = 544
Score = 34.7 bits (78), Expect = 2.4 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Frame = +1
Query: 157 ALSRRHPIFS-TRLSGPNVRHVSSTVPSRRVDCRDAQDVSSTLSTS*GTDCRDSSEKISA 333 A + RHP+++ R+ PN+R+ V S+R+D +D D S D+S ++ Sbjct: 238 AFAGRHPVYAYPRVRYPNLRYARRIVFSQRLDIQDNHDQSD-----------DNSRWLTG 286
Query: 334 PCCRAWLLFTVL-SPTFKSVASLDGFAILLELSEPS 438 WL+ L +PT K+V +D ++LL P+ Sbjct: 287 ----RWLVVAYLFAPTRKAVKRMDVKSLLLSGCTPA 318
>tr|B4G2N5|B4G2N5_DROPE GL23937 OS=Drosophila persimilis GN=GL23937 PE=4 SV=1 Length = 146
Score = 34.3 bits (77), Expect = 3.2 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -1
Query: 263 CASLQSTLLDGTVDDTCRTFGPDSLVENIGCLRDNACKGPASL----KCFDIDANQCSSD 96 C+ L+ VD CR + + N C R N C P + KC + +C SD Sbjct: 37 CSPYYKELVWAIVDGVCRVYQNGCIFGNENCTRVNQCLTPMNATSPDKCKEYCPRRCPSD 96
Query: 95 GKV 87 G+V Sbjct: 97 GQV 99
>tr|Q1YPB4|Q1YPB4_9GAMM Adenine glycosylase OS=gamma proteobacterium HTCC2207 GN=GB2207_07477 PE=4 SV=1 Length = 350
Score = 33.9 bits (76), Expect = 4.2 Identities = 14/23 (60%), Positives = 16/23 (69%) Frame = +2
Query: 374 PLLSRWHHWTALQYYWSSRNLHK 442 PL + HHWT L YY +RNLHK Sbjct: 69 PLDNVLHHWTGLGYYARARNLHK 91
>tr|B4PUT9|B4PUT9_DROYA GE24161 OS=Drosophila yakuba GN=GE24161 PE=4 SV=1 Length = 2286
Score = 33.9 bits (76), Expect = 4.2 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +2
Query: 77 FHKRPFHHYCIDLHQCQNTLSLQDLYKHYHVDILYSPRGYQAQMSDMYHRLYRR 238 +H RPF HY + HQ QN + Y HY+ Q +HR RR Sbjct: 1267 YHNRPFQHYGQNYHQNQNYHNQHQQYFHYN---------QHGQQQQFFHRPKRR 1311
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