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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913461
Clone id YMU001_000030_E04
Library
Length 551
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAGGTACTCCTTCATCTTTAACTCAAGAATGTATGCGTCCAACTCCTCTAAGTGAGATG
CATGTACCTTCACAAGTTCTCCTTTCAATGAAAAACTTTGTGCTTCTCTATCAAGCTGAA
AACTAGCAGCATCTTTCCCTTTGTAATGCTTCAATGCCCACTGCAACTCTCTGACTGCTC
CCTGTAGTATTGACATAGCATCGGCTGTATCAGCTCTTTCAATTTCAAGCAACTTGATCA
AGTCTTCATTGTCCCTCGTGGGCAAAAGTTCTCTTTCACCCCAGTCTTCTCCACTCTCAA
GTATCGTGCTATGTTCTTCTAGGACTTTTGGTTCGACTCGCTCGTGTATCCATGCTACCT
TCCTCTCAGAGTCTCGTTCTAACCTTGCCCTTTGAAGTTCCTTTTCCTTTGCGTTTAGCT
CTTCTTTGAGACTGTGGATAGCCAGCATTGCCTCAGCTATTTGATTATCAAAGCCTGCAA
TTTTACTAATCAAATCTTGCCATTCTACATCTCTTCTGCCACCAAAACCACTAGTTTGGG
TGCTTCCCGAC
■■Homology search results ■■ -
sp_hit_id A9IK31
Definition sp|A9IK31|SYA_BORPD Alanyl-tRNA synthetase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
Align length 65
Score (bit) 31.2
E-value 3.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913461|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_E04.
         (551 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A9IK31|SYA_BORPD Alanyl-tRNA synthetase OS=Bordetella petrii ...    31   3.5  
sp|O07014|RSBP_BACSU Phosphoserine phosphatase rsbP OS=Bacillus ...    31   3.5  
sp|Q9KV29|RPOC_VIBCH DNA-directed RNA polymerase subunit beta' O...    31   3.5  
sp|A5F3P6|RPOC_VIBC3 DNA-directed RNA polymerase subunit beta' O...    31   3.5  
sp|P25359|RRP43_YEAST Exosome complex component RRP43 OS=Sacchar...    31   4.6  
sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-pr...    31   4.6  
sp|Q99661|KIF2C_HUMAN Kinesin-like protein KIF2C OS=Homo sapiens...    31   4.6  
sp|Q9ESN9|JIP3_MOUSE C-jun-amino-terminal kinase-interacting pro...    31   4.6  
sp|Q9UPT6|JIP3_HUMAN C-jun-amino-terminal kinase-interacting pro...    31   4.6  
sp|Q7M2U7|APOE_ZALCA Apolipoprotein E OS=Zalophus californianus ...    31   4.6  
sp|P34237|CASP_YEAST Protein CASP OS=Saccharomyces cerevisiae GN...    30   6.0  
sp|O29230|RAD50_ARCFU DNA double-strand break repair rad50 ATPas...    30   7.8  

>sp|A9IK31|SYA_BORPD Alanyl-tRNA synthetase OS=Bordetella petrii
           (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=alaS
           PE=3 SV=1
          Length = 873

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 22/65 (33%), Positives = 37/65 (56%)
 Frame = -2

Query: 232 LLEIERADTADAMSILQGAVRELQWALKHYKGKDAASFQLDREAQSFSLKGELVKVHASH 53
           +L    AD  + ++ +Q  +R L+  L+  +GK AAS   D  A++  +KG  VKV A+ 
Sbjct: 717 MLRTTPADLPERLAQVQEQLRTLEKDLEQARGKLAASAGNDLAAKAAEVKG--VKVLAAS 774

Query: 52  LEELD 38
           L ++D
Sbjct: 775 LGDID 779


>sp|O07014|RSBP_BACSU Phosphoserine phosphatase rsbP OS=Bacillus
           subtilis GN=rsbP PE=1 SV=1
          Length = 403

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = -2

Query: 298 ESGEDWGERELLPTRDNEDLIKLLEIERADTADAMSILQGAVRELQWALKHYKGKDAASF 119
           +SG    +  L+P R   +    L I R +  +A+   Q A  EL+ AL+  K K     
Sbjct: 96  DSGASVFDCVLIPMRKRNEYENELLIARNEAQEALLAKQKANAELEIALETLKAKQEELL 155

Query: 118 QLDREAQSFSL 86
           +++++ Q F L
Sbjct: 156 EINKQNQQFKL 166


>sp|Q9KV29|RPOC_VIBCH DNA-directed RNA polymerase subunit beta'
            OS=Vibrio cholerae GN=rpoC PE=3 SV=1
          Length = 1401

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
 Frame = -2

Query: 334  EPKVLEEHSTILESGEDW-GERELLPTRDNEDL----------IKLLEIERADTADAMSI 188
            EP +L EHS  +  G++  G+R L+ TRD+ D           + + E ER +  D   I
Sbjct: 1152 EPAILAEHSGTVSFGKETKGKRRLIITRDSGDTYEEMIPKHRQLNVFEGERIERGDV--I 1209

Query: 187  LQGAVRELQWALKHYKGKDAASFQLDREAQS-FSLKGELVKVHASHLEEL 41
              G   E    +   +G  A +  +  E Q  + L+G  VK++  H+E +
Sbjct: 1210 ADGP--ESPHDILRLRGIHAVTTYIANEVQEVYRLQG--VKINDKHIETI 1255


>sp|A5F3P6|RPOC_VIBC3 DNA-directed RNA polymerase subunit beta'
            OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa
            395 / O395) GN=rpoC PE=3 SV=1
          Length = 1401

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
 Frame = -2

Query: 334  EPKVLEEHSTILESGEDW-GERELLPTRDNEDL----------IKLLEIERADTADAMSI 188
            EP +L EHS  +  G++  G+R L+ TRD+ D           + + E ER +  D   I
Sbjct: 1152 EPAILAEHSGTVSFGKETKGKRRLIITRDSGDTYEEMIPKHRQLNVFEGERIERGDV--I 1209

Query: 187  LQGAVRELQWALKHYKGKDAASFQLDREAQS-FSLKGELVKVHASHLEEL 41
              G   E    +   +G  A +  +  E Q  + L+G  VK++  H+E +
Sbjct: 1210 ADGP--ESPHDILRLRGIHAVTTYIANEVQEVYRLQG--VKINDKHIETI 1255


>sp|P25359|RRP43_YEAST Exosome complex component RRP43
           OS=Saccharomyces cerevisiae GN=RRP43 PE=1 SV=2
          Length = 394

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
 Frame = -2

Query: 325 VLEEHSTILESGEDWGERELLPTRDNEDLI-------KLLEIER----ADTADAMSILQG 179
           ++EE S  ++  +D+GE EL      ED+I        ++E+ER    A T + M+I Q 
Sbjct: 95  IIEETSAAIKDLDDFGEEELFEVTKEEDIIANYASVYPVVEVERGRVGACTDEEMTISQ- 153

Query: 178 AVRELQWALKHYKGKDAASFQLDREAQSFSLKGELVKVHASHLEELDAYILELKMK 11
              +L  ++ H +     + ++    +S +  G    ++   LE+       LKMK
Sbjct: 154 ---KLHDSILHSRILPKKALKVKAGVRSANEDGTFSVLYPDELEDDTLNETNLKMK 206


>sp|O15021|MAST4_HUMAN Microtubule-associated serine/threonine-protein
            kinase 4 OS=Homo sapiens GN=MAST4 PE=1 SV=3
          Length = 2626

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
 Frame = -2

Query: 286  DWGERELLPTRDNEDLIKLL----EIERADTADAMSILQGA-VRELQW-ALKHYKGKDAA 125
            +W E++  P  D +DLI LL     +ER  T  A  + Q    R L W +L   K +   
Sbjct: 804  NWPEKDEAPPPDAQDLITLLLRQNPLERLGTGGAYEVKQHRFFRSLDWNSLLRQKAEFIP 863

Query: 124  SFQLDREAQSFSLKGELVKVHASHLEELD 38
              + + +   F  + E  K H    EE D
Sbjct: 864  QLESEDDTSYFDTRSE--KYHHMETEEED 890


>sp|Q99661|KIF2C_HUMAN Kinesin-like protein KIF2C OS=Homo sapiens
           GN=KIF2C PE=1 SV=2
          Length = 725

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
 Frame = -2

Query: 337 VEPKVLEEHSTILESGEDW---GERELLPTRDNEDLIKLLEIERADTADAMSILQGAVRE 167
           +E K +EE   I++ G DW    E    P  D E  +   E   A  A   S L+  ++ 
Sbjct: 644 LEEKAMEELKEIIQQGPDWLELSEMTEQPDYDLETFVNKAESALAQQAKHFSALRDVIKA 703

Query: 166 LQWALK 149
           L+ A++
Sbjct: 704 LRLAMQ 709


>sp|Q9ESN9|JIP3_MOUSE C-jun-amino-terminal kinase-interacting
           protein 3 OS=Mus musculus GN=Mapk8ip3 PE=1 SV=1
          Length = 1337

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 17/116 (14%)
 Frame = -2

Query: 325 VLEEHSTIL-ESGEDWGERELLPTRDNEDLIKLLEIERADTADA-------MSILQGAVR 170
           VLE   ++L E+ E   E ELL   DNE L+   E E+A    A          L+   +
Sbjct: 62  VLENLDSVLSENQEHEVELELL-REDNEQLLTQYEREKALRKQAEEKFIEFEDALEQEKK 120

Query: 169 ELQWALKHY---------KGKDAASFQLDREAQSFSLKGELVKVHASHLEELDAYI 29
           ELQ  ++HY         K K+ A      E +   +K E   +H  H E +  Y+
Sbjct: 121 ELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQRHTEMIQTYV 176


>sp|Q9UPT6|JIP3_HUMAN C-jun-amino-terminal kinase-interacting
           protein 3 OS=Homo sapiens GN=MAPK8IP3 PE=1 SV=3
          Length = 1336

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 17/116 (14%)
 Frame = -2

Query: 325 VLEEHSTIL-ESGEDWGERELLPTRDNEDLIKLLEIERADTADA-------MSILQGAVR 170
           VLE   ++L E+ E   E ELL   DNE L+   E E+A    A          L+   +
Sbjct: 62  VLENLDSVLSENQEHEVELELL-REDNEQLLTQYEREKALRRQAEEKFIEFEDALEQEKK 120

Query: 169 ELQWALKHY---------KGKDAASFQLDREAQSFSLKGELVKVHASHLEELDAYI 29
           ELQ  ++HY         K K+ A      E +   +K E   +H  H E +  Y+
Sbjct: 121 ELQIQVEHYEFQTRQLELKAKNYADQISRLEERESEMKKEYNALHQRHTEMIQTYV 176


>sp|Q7M2U7|APOE_ZALCA Apolipoprotein E OS=Zalophus californianus
           GN=APOE PE=2 SV=1
          Length = 329

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 12/94 (12%)
 Frame = -2

Query: 256 RDNEDLIKLLEIERADTADAMSILQGAVRELQWAL------KHYKGKDAASFQLDRE--- 104
           RD EDL K L + RA   +        +RE  W L      +H K  DA + Q  RE   
Sbjct: 180 RDAEDLQKRLAVYRAGVREGAERSVSTIRERLWPLLEQARTRHAK-VDALATQPLRERVN 238

Query: 103 AQSFSLKGELVKVHA---SHLEELDAYILELKMK 11
           A    L+G L +V +   SHL+E+   + E++ K
Sbjct: 239 ALGQQLRGRLEEVGSRARSHLDEVREQMEEVQAK 272
tr_hit_id A9RMY8
Definition tr|A9RMY8|A9RMY8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 168
Score (bit) 76.6
E-value 8.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913461|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_E04.
         (551 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RMY8|A9RMY8_PHYPA Predicted protein OS=Physcomitrella paten...    77   8e-13
tr|A9RGU3|A9RGU3_PHYPA Predicted protein OS=Physcomitrella paten...    69   1e-10
tr|A7QI29|A7QI29_VITVI Chromosome chr17 scaffold_101, whole geno...    37   0.69 
tr|A9JRZ1|A9JRZ1_DANRE Zgc:175222 protein OS=Danio rerio GN=zgc:...    36   1.2  
tr|B2V941|B2V941_SULSY Efflux transporter, RND family, MFP subun...    35   2.6  
tr|Q8P3N3|Q8P3N3_XANCP Cation efflux system protein OS=Xanthomon...    34   4.5  
tr|Q4UP57|Q4UP57_XANC8 Cation efflux system protein OS=Xanthomon...    34   4.5  
tr|Q1QXH2|Q1QXH2_CHRSD Transcriptional regulator, ArsR family OS...    34   5.9  
tr|Q2BDJ8|Q2BDJ8_9BACI Acylamino-acid-releasing enzyme OS=Bacill...    34   5.9  
tr|B7D7P5|B7D7P5_9BURK Sigma-70 region 4 domain protein OS=Diaph...    34   5.9  
tr|A1L275|A1L275_DANRE LOC557688 protein (Fragment) OS=Danio rer...    33   7.7  
tr|B2TAX1|B2TAX1_BURPP Putative uncharacterized protein OS=Burkh...    33   7.7  
tr|Q7PV87|Q7PV87_ANOGA AGAP012090-PA (Fragment) OS=Anopheles gam...    33   7.7  
tr|Q46BA7|Q46BA7_METBF Putative uncharacterized protein OS=Metha...    33   7.7  
tr|A5IZ70|A5IZ70_MYCAP Putative uncharacterized protein OS=Mycop...    33   10.0 

>tr|A9RMY8|A9RMY8_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_160045 PE=4 SV=1
          Length = 1257

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 5/168 (2%)
 Frame = -2

Query: 499  QDLISKIAGFDNQIAEAMLAIHSXXXXXXXXXXXLQRARLERDSERKVAWIHERVEPKVL 320
            Q  + ++A  D QI EAM AI S           L +A++++++E    W  ER +  ++
Sbjct: 708  QAAVCRVANVDKQIEEAMDAIVSLREELDNKETQLIQAKMDKEAE----W--ERRQAALV 761

Query: 319  EEHSTILESGED-----WGERELLPTRDNEDLIKLLEIERADTADAMSILQGAVRELQWA 155
            +E+  +L   E      W  +E      N+ ++  L  ER +TA    +++GA+REL+W+
Sbjct: 762  QEYKEMLSMREQKWQQGWMRKEQELLAANDKILHQLADERGETA----LVRGALRELEWS 817

Query: 154  LKHYKGKDAASFQLDREAQSFSLKGELVKVHASHLEELDAYILELKMK 11
            +KH          +  +  + S K  +VKVHASHLEE+D YIL+L+ K
Sbjct: 818  IKH------GDIDVKAKLANISKKEGMVKVHASHLEEVDQYILDLQKK 859


>tr|A9RGU3|A9RGU3_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_65935 PE=4 SV=1
          Length = 1436

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
 Frame = -2

Query: 550  SGSTQTSGFGGRRDVEWQDLISKIAGFDNQIAEAMLAIHSXXXXXXXXXXXLQRARLERD 371
            S   +  G   + D + Q    ++   D QI EAM  I S           L+ A+  ++
Sbjct: 938  SAEPKHGGIDCQDDFDSQAADFRVVNVDIQIEEAMNEIESLREELDNKETQLKHAKKVKE 997

Query: 370  SERKVAWIHERVEPKVLEEHSTILESGED-----WGERELLPTRDNEDLIKLLEIERADT 206
             E    W  ER +  ++EE+  +L+  E      W  +E      N+ ++  L  +R +T
Sbjct: 998  IE----W--ERRQAALIEEYEDMLDMREQELQQVWMRKEQELLSANDKILHQLADQRGET 1051

Query: 205  ADAMSILQGAVRELQWALKHYKGKDAASFQLDREAQSFSLKGELVKVHASHLEELDAYIL 26
            A    I+QGA+REL+W +KH          +  +    S K  +VKVH SHLEE+D YI 
Sbjct: 1052 A----IVQGALRELEWFIKH------GDTNIKAKLADISKKEGMVKVHTSHLEEVDLYIQ 1101

Query: 25   ELKMK 11
            EL+ K
Sbjct: 1102 ELQAK 1106


>tr|A7QI29|A7QI29_VITVI Chromosome chr17 scaffold_101, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000070001
           PE=4 SV=1
          Length = 875

 Score = 37.0 bits (84), Expect = 0.69
 Identities = 23/69 (33%), Positives = 33/69 (47%)
 Frame = -2

Query: 208 TADAMSILQGAVRELQWALKHYKGKDAASFQLDREAQSFSLKGELVKVHASHLEELDAYI 29
           T + M  LQ   R    AL+ Y+    A FQ D+   S  ++   V  H  HLEE +A  
Sbjct: 521 TYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVME---VLGHCGHLEEAEAIF 577

Query: 28  LELKMKEYL 2
            E+K K ++
Sbjct: 578 TEMKRKNWV 586


>tr|A9JRZ1|A9JRZ1_DANRE Zgc:175222 protein OS=Danio rerio
           GN=zgc:175222 PE=2 SV=1
          Length = 638

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
 Frame = -2

Query: 382 LERDSERKVAWIH----ERVEPKVLEEHSTILESGEDWGERELLPTRDNEDLIKLLEIER 215
           +ER+ + +  +I     ER    + E H  ++E  +   +REL   ++ ++  +LLE E 
Sbjct: 311 VEREQQTRAGYISPATCERGFAAMEESHQKVIEELQKKHQRELEKLQEEKE--RLLEEET 368

Query: 214 ADTADAMSILQGAVR-ELQWALKHYKGKDAASFQLDREAQSFSLKGELVKVHASHLEELD 38
           A T  A+  ++ A R EL+  L+             R+A S +   ++ ++H  H EEL 
Sbjct: 369 AATIAAIEAMKNAHRSELERELEKA-----------RKATSSTENADIEEIHKQHEEELV 417

Query: 37  AYILELKM 14
           +Y  E+++
Sbjct: 418 SYQREIEV 425


>tr|B2V941|B2V941_SULSY Efflux transporter, RND family, MFP subunit
           OS=Sulfurihydrogenibium sp. (strain YO3AOP1)
           GN=SYO3AOP1_0831 PE=4 SV=1
          Length = 372

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 21/82 (25%), Positives = 41/82 (50%)
 Frame = -2

Query: 328 KVLEEHSTILESGEDWGERELLPTRDNEDLIKLLEIERADTADAMSILQGAVRELQWALK 149
           KV E    + E G       L+P    +++ K LE+ + D   A++  Q +++EL + LK
Sbjct: 133 KVYERRKNLFEKG-------LIPKEQFDEVAKNLEVAKRDYEKAVASYQDSLKELSYQLK 185

Query: 148 HYKGKDAASFQLDREAQSFSLK 83
            ++ K A   ++ +E   + +K
Sbjct: 186 SFEAKKA---EVAKEIDKYYIK 204


>tr|Q8P3N3|Q8P3N3_XANCP Cation efflux system protein OS=Xanthomonas
           campestris pv. campestris GN=czcC PE=4 SV=1
          Length = 421

 Score = 34.3 bits (77), Expect = 4.5
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
 Frame = -2

Query: 517 RRDVEWQDLISKIAGFDNQ--IAEAMLAIHSXXXXXXXXXXXLQRARLE-RDSERKVAWI 347
           R D++WQ  + ++ G D    +    LA+ S             RAR E R +E +++ +
Sbjct: 268 RPDLDWQVGVRRLQGSDATALVGGVSLALGSAA-----------RARPEIRAAEAELSLL 316

Query: 346 HERVEPKVLEEHSTILESGEDWGERELLPTRDNEDLIKLLEIERADTADAMSILQGAVRE 167
               + +VL  ++T+ ++   +   +L  +R  ED++  L   RAD A   +   GA   
Sbjct: 317 DIERQSQVLVLYTTLADAHGRYRAAQLEVSRMREDVLPALA--RADAAAERAYRAGATSY 374

Query: 166 LQWALKHYKGKDAASFQL 113
           L WA    +  DA   QL
Sbjct: 375 LDWAQLQAQHNDARQQQL 392


>tr|Q4UP57|Q4UP57_XANC8 Cation efflux system protein OS=Xanthomonas
           campestris pv. campestris (strain 8004) GN=XC_4127 PE=4
           SV=1
          Length = 421

 Score = 34.3 bits (77), Expect = 4.5
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
 Frame = -2

Query: 517 RRDVEWQDLISKIAGFDNQ--IAEAMLAIHSXXXXXXXXXXXLQRARLE-RDSERKVAWI 347
           R D++WQ  + ++ G D    +    LA+ S             RAR E R +E +++ +
Sbjct: 268 RPDLDWQVGVRRLQGSDATALVGGVSLALGSAA-----------RARPEIRAAEAELSLL 316

Query: 346 HERVEPKVLEEHSTILESGEDWGERELLPTRDNEDLIKLLEIERADTADAMSILQGAVRE 167
               + +VL  ++T+ ++   +   +L  +R  ED++  L   RAD A   +   GA   
Sbjct: 317 DIERQSQVLVLYTTLADAHGRYRAAQLEVSRMREDVLPALA--RADAAAERAYRAGATSY 374

Query: 166 LQWALKHYKGKDAASFQL 113
           L WA    +  DA   QL
Sbjct: 375 LDWAQLQAQHNDARQQQL 392


>tr|Q1QXH2|Q1QXH2_CHRSD Transcriptional regulator, ArsR family
           OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
           BAA-138 / NCIMB 13768) GN=Csal_1483 PE=4 SV=1
          Length = 135

 Score = 33.9 bits (76), Expect = 5.9
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = -2

Query: 394 QRARLERDSERKVAWIHERVEPKVLEEHSTILESGEDWGERELL 263
           +RA L RD  R+ AWI+ R+EP + E  STILE+  D    E++
Sbjct: 57  RRAGLLRD-RRRGAWIYYRLEPTLPEWVSTILEASRDAAPPEVI 99


>tr|Q2BDJ8|Q2BDJ8_9BACI Acylamino-acid-releasing enzyme OS=Bacillus
           sp. NRRL B-14911 GN=B14911_12652 PE=4 SV=1
          Length = 594

 Score = 33.9 bits (76), Expect = 5.9
 Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
 Frame = -2

Query: 262 PTRDNEDLIKLLEIERADT-ADAMSILQGAVR---------ELQWALKHYKGKDAASFQL 113
           P +D E LI+   I   DT    M ++QGA           ++  AL+  KG++     L
Sbjct: 507 PVKDKEKLIEYSPITYLDTMTKPMLVIQGAKDPRVVKAESDKIVAALQE-KGREVEYLVL 565

Query: 112 DREAQSFSLKGELVKVHASHLEELDAYI 29
           D E   FS K   +KV+   LE  D +I
Sbjct: 566 DDEGHGFSKKDNEIKVYRKVLEFFDGFI 593


>tr|B7D7P5|B7D7P5_9BURK Sigma-70 region 4 domain protein
           OS=Diaphorobacter sp. TPSY GN=DtpsyDRAFT_2508 PE=4 SV=1
          Length = 893

 Score = 33.9 bits (76), Expect = 5.9
 Identities = 29/122 (23%), Positives = 55/122 (45%)
 Frame = -2

Query: 367 ERKVAWIHERVEPKVLEEHSTILESGEDWGERELLPTRDNEDLIKLLEIERADTADAMSI 188
           +RK + +H+ V+PK L           D+G    L   D++    LL+I R D   A+S+
Sbjct: 290 KRKTSKLHDEVDPKAL----------VDYGPNSKLSAIDDDIQDGLLKISRHDA--ALSL 337

Query: 187 LQGAVRELQWALKHYKGKDAASFQLDREAQSFSLKGELVKVHASHLEELDAYILELKMKE 8
           + G V   Q   ++ +G  AA      E  +     + + V    + +++  I + K++ 
Sbjct: 338 IDGIVEAAQCLNENERGIFAARLGFRCEPHTLQQISDQIGVSRERVRQIEVKIFK-KIRR 396

Query: 7   YL 2
           +L
Sbjct: 397 HL 398