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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913464
Clone id YMU001_000030_E07
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTGTTGCTTAAATTTGAACTGATTCTATTCAGTATCATAAAAATCATAT
TACAAGATAGTCATGAGTATATTCCAGAAAGAATACTCCGCTATAACATGTTTCCCAAAG
TGCCAAGTTTGTTCCCAAAAGAATCACTCCACTATATCATGGTTCCCCATGTTCATACCT
TATGCAGTACAAATGATCTGAAGGGGGCCACCACCTTTCCTGAGATTTTTATTTAGTTCG
CACTGGGGAAAGCTGGAGTTTCACACCATGACAATACTTTACAACAACTCTGCTCTAGTT
ATCAGCTGAACGAATCAATGTAAGCTACAATTCTTCTGTACAAATGGAAGTGTACAGCCT
TCCTTGGTGGATTCCTTCACTGACTTGAATGGTTCCTTCTTCCTCGTGTTATTTCCAAGT
GATACCTCCCAGAAACAAATAACCCGCTGGGAGATCAAAGATTTCTCAACACTAATATTT
GCTTTGTTTGCTACAATATGAACTAATTCTTCTATCCACACTGTCTTGACGAAACCACCT
GTATCCTCTTTCGAC
■■Homology search results ■■ -
sp_hit_id O95398
Definition sp|O95398|RPGF3_HUMAN Rap guanine nucleotide exchange factor 3 OS=Homo sapiens
Align length 31
Score (bit) 32.0
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913464|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_E07.
         (539 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O95398|RPGF3_HUMAN Rap guanine nucleotide exchange factor 3 O...    32   2.0  
sp|P33281|ERG2_MAGGR C-8 sterol isomerase OS=Magnaporthe grisea ...    30   5.7  
sp|P16790|VPAP_HCMVA DNA polymerase processivity factor OS=Human...    30   7.5  
sp|Q69ZK0|PREX1_MOUSE Phosphatidylinositol 3,4,5-trisphosphate-d...    30   9.8  
sp|Q8TCU6|PREX1_HUMAN Phosphatidylinositol 3,4,5-trisphosphate-d...    30   9.8  

>sp|O95398|RPGF3_HUMAN Rap guanine nucleotide exchange factor 3
           OS=Homo sapiens GN=RAPGEF3 PE=1 SV=4
          Length = 923

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 313 NSSVQMEVYSLPWWIPSLT*MVPSSSCYFQV 405
           N+S QM+  +LP W+P+    +P SSC  QV
Sbjct: 526 NASPQMKARNLPVWLPNQDEPLPGSSCAIQV 556


>sp|P33281|ERG2_MAGGR C-8 sterol isomerase OS=Magnaporthe grisea
           GN=ERG2 PE=3 SV=1
          Length = 221

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +1

Query: 136 LYHGSPCSYLMQYK*SEG-----GHHLS*DFYLVRTGESWSFTP*QY 261
           + H S   YL+ +  + G     G H + D++ + TGE W++ P +Y
Sbjct: 97  IIHASVTEYLIIFGTAIGTEGHTGRHTADDYFNILTGEQWAYVPGEY 143


>sp|P16790|VPAP_HCMVA DNA polymerase processivity factor OS=Human
           cytomegalovirus (strain AD169) GN=UL44 PE=1 SV=1
          Length = 433

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
 Frame = +3

Query: 249 TMTILYNNSALVIS*TNQC--KLQF-----FCTNGSVQPSLVDSFTDLNGSFFLVLFPSD 407
           T+T L   S ++ +  + C  K+ F     + T+ S QP  +++ T L G+F  +     
Sbjct: 39  TVTFLPTPSLILQTVRSHCVSKITFNSSCLYITDKSFQPKTINNSTPLLGNFMYL----- 93

Query: 408 TSQKQITRWEIKDFSTL 458
           TS K +T++ ++D S L
Sbjct: 94  TSSKDLTKFYVQDISDL 110


>sp|Q69ZK0|PREX1_MOUSE Phosphatidylinositol
            3,4,5-trisphosphate-dependent Rac exchanger 1 protein
            OS=Mus musculus GN=Prex1 PE=1 SV=2
          Length = 1650

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -2

Query: 439  ISQRVICFWEVSLGNNTRKKEPFKSVKESTKEGCTLPFVQKNCSLH 302
            I QR+ C+ E +    +R   PFK         C L F   NC ++
Sbjct: 920  IGQRIACYQEFAAQLKSRVSPPFKQASLEPHPLCGLDFCPTNCHVN 965


>sp|Q8TCU6|PREX1_HUMAN Phosphatidylinositol
            3,4,5-trisphosphate-dependent Rac exchanger 1 protein
            OS=Homo sapiens GN=PREX1 PE=1 SV=3
          Length = 1659

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -2

Query: 439  ISQRVICFWEVSLGNNTRKKEPFKSVKESTKEGCTLPFVQKNCSLH 302
            I QR+ C+ E +    +R   PFK         C L F   NC ++
Sbjct: 930  IGQRIACYQEFAAQLKSRVSPPFKQAPLEPHPLCGLDFCPTNCHIN 975
tr_hit_id Q6Z072
Definition tr|Q6Z072|Q6Z072_ORYSJ Os08g0195800 protein OS=Oryza sativa subsp. japonica
Align length 78
Score (bit) 37.0
E-value 0.66
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913464|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_E07.
         (539 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6Z072|Q6Z072_ORYSJ Os08g0195800 protein OS=Oryza sativa subs...    37   0.66 
tr|A3BQG5|A3BQG5_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.66 
tr|A2YS41|A2YS41_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.66 
tr|A8P0Q9|A8P0Q9_BRUMA Metabotropic glutamate receptor subtype 5...    34   4.3  
tr|A8UD07|A8UD07_9LACT Ribokinase OS=Carnobacterium sp. AT7 GN=C...    33   7.3  

>tr|Q6Z072|Q6Z072_ORYSJ Os08g0195800 protein OS=Oryza sativa subsp.
           japonica GN=P0412D08.8 PE=4 SV=1
          Length = 346

 Score = 37.0 bits (84), Expect = 0.66
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = -1

Query: 413 GGITWK*HEEEGTIQVSEGIHQGRLYTSICTEEL*LTLIRSADN*SRVVVKYCHGVKLQL 234
           GGI WK +++ G I    G+   +L+ +  T E   T++ +  N   + +++C  + +  
Sbjct: 191 GGIRWKNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGA 250

Query: 233 SPVRTK*KSQERWWPPSD 180
             +R K    +   PP D
Sbjct: 251 DSLRAKCSRIKMLRPPDD 268


>tr|A3BQG5|A3BQG5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_025287 PE=4 SV=1
          Length = 346

 Score = 37.0 bits (84), Expect = 0.66
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = -1

Query: 413 GGITWK*HEEEGTIQVSEGIHQGRLYTSICTEEL*LTLIRSADN*SRVVVKYCHGVKLQL 234
           GGI WK +++ G I    G+   +L+ +  T E   T++ +  N   + +++C  + +  
Sbjct: 191 GGIRWKNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGA 250

Query: 233 SPVRTK*KSQERWWPPSD 180
             +R K    +   PP D
Sbjct: 251 DSLRAKCSRIKMLRPPDD 268


>tr|A2YS41|A2YS41_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28140 PE=4 SV=1
          Length = 346

 Score = 37.0 bits (84), Expect = 0.66
 Identities = 19/78 (24%), Positives = 37/78 (47%)
 Frame = -1

Query: 413 GGITWK*HEEEGTIQVSEGIHQGRLYTSICTEEL*LTLIRSADN*SRVVVKYCHGVKLQL 234
           GGI WK +++ G I    G+   +L+ +  T E   T++ +  N   + +++C  + +  
Sbjct: 191 GGIRWKNNDDAGGISKMHGLRSLQLFANNLTNEGLSTILDNCPNLESLDIRHCFNIDMGA 250

Query: 233 SPVRTK*KSQERWWPPSD 180
             +R K    +   PP D
Sbjct: 251 DSLRAKCSRIKMLRPPDD 268


>tr|A8P0Q9|A8P0Q9_BRUMA Metabotropic glutamate receptor subtype 5a
           (MGluR5a), putative (Fragment) OS=Brugia malayi
           GN=Bm1_13620 PE=4 SV=1
          Length = 415

 Score = 34.3 bits (77), Expect = 4.3
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -1

Query: 197 WWPPSDHLYCIRYEHGEP*YS--GVI--LLGTNLALWETCYSGVFFLEYTHDYLV 45
           WWP  DH  C    H  P +S  G+I  LL  +L +  T ++ + F+ Y H  +V
Sbjct: 34  WWPNDDHTTCYPLVHEGPDWSSTGIILALLLASLGIIMTSFTVLIFIRYNHTPVV 88


>tr|A8UD07|A8UD07_9LACT Ribokinase OS=Carnobacterium sp. AT7
           GN=CAT7_00665 PE=3 SV=1
          Length = 301

 Score = 33.5 bits (75), Expect = 7.3
 Identities = 26/88 (29%), Positives = 40/88 (45%)
 Frame = +2

Query: 32  IKIILQDSHEYIPERILRYNMFPKVPSLFPKESLHYIMVPHVHTLCSTNDLKGATTFPEI 211
           IKII   +    P R +  ++  K   L P ES   ++ P +         +G   FP  
Sbjct: 157 IKIIYNPA----PAREVNQSVLEKATYLTPNESEFNLLFPEMTIS------EGLAKFPNQ 206

Query: 212 FI*FALGKAGVSHHDNTLQQLCSSYQLN 295
            I   +G  GV +HD T ++  SSY++N
Sbjct: 207 LI-VTMGSKGVYYHDGTSEKHISSYKVN 233