BP913470
Clone id YMU001_000030_F02
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCGACGGGGATAATGATGTGAAAGTGATTGTGATTGTTTGGTGACTTGTGTCTTTGTGC
CAGTGAGAGTAATCACCCTCGATTAGGCTTGCAAAACAGACAGTGGACAATAAACAAGCT
CAGTAGACACTAACCCTATGCATACTGTCCAGAAGATCACTCGAACCTGTTTCATTTCTA
TTTAGTGATTGTTGCAGTGAGTCTACCGCCTTGCTTGTGGCGTGCCGGTTGTAGTAAGAG
GGGTCATGTAAGGCTTTTTCTGAAGCAGTACATTGTCTTAATCAGATGTAAGGGGGTTAG
GTGCTTAGAGGGTCATTTGAGAGCATTTGCTGAACGAGTAAATTGACTTTACTGGAAGCT
TGTGCTTTAGGAGAAATTTTATGTAGTGGATACATTCATTCTACATTTCGTTTCTTTANA
GTAACCACACATTATACTTCATGACTTACAGAAAATGAAATTAGATTTACTGGAGTTAAT
TCCTCCA
■■Homology search results ■■ -
sp_hit_id Q3UXL4
Definition sp|Q3UXL4|CT019_MOUSE Uncharacterized protein C20orf19 homolog OS=Mus musculus
Align length 62
Score (bit) 32.7
E-value 0.88
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913470|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_F02.
(487 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q3UXL4|CT019_MOUSE Uncharacterized protein C20orf19 homolog O... 33 0.88
sp|P0C6T4|R1A_BCHK4 Replicase polyprotein 1a OS=Bat coronavirus ... 30 5.8
sp|P0C6W3|R1AB_BCHK4 Replicase polyprotein 1ab OS=Bat coronaviru... 30 5.8
sp|Q06FP5|RK32_PELHO 50S ribosomal protein L32, chloroplastic OS... 29 9.9

>sp|Q3UXL4|CT019_MOUSE Uncharacterized protein C20orf19 homolog
OS=Mus musculus GN=Gm114 PE=2 SV=1
Length = 695

Score = 32.7 bits (73), Expect = 0.88
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3

Query: 281 LRQCTASEKALHDPSYYNRHATSKAVDSLQQSLNRNETGSSDLLDSMHRVSVY*ACLLST 102
LRQ +A+ L PSYY R V LQQ+L +E DL D ++ + C
Sbjct: 12 LRQASATSAPLASPSYYER------VGQLQQALRDSEKKRLDLEDKLYEYNKSDKCRAKL 65

Query: 101 VC 96
C
Sbjct: 66 KC 67


>sp|P0C6T4|R1A_BCHK4 Replicase polyprotein 1a OS=Bat coronavirus
HKU4 GN=1a PE=3 SV=1
Length = 4434

Score = 30.0 bits (66), Expect = 5.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1

Query: 310 GSFESIC*TSKLTLLEACALGEILCSGYIHSTFRFFXVTTH----YTS 441
G+ S C T+ + L AC +G+I+ F+ F V H YTS
Sbjct: 638 GTVSSACQTALSSFLNACVAASRATAGFINDMFKLFKVLMHKLYVYTS 685


>sp|P0C6W3|R1AB_BCHK4 Replicase polyprotein 1ab OS=Bat coronavirus
HKU4 GN=rep PE=3 SV=1
Length = 7119

Score = 30.0 bits (66), Expect = 5.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1

Query: 310 GSFESIC*TSKLTLLEACALGEILCSGYIHSTFRFFXVTTH----YTS 441
G+ S C T+ + L AC +G+I+ F+ F V H YTS
Sbjct: 638 GTVSSACQTALSSFLNACVAASRATAGFINDMFKLFKVLMHKLYVYTS 685


>sp|Q06FP5|RK32_PELHO 50S ribosomal protein L32, chloroplastic
OS=Pelargonium hortorum GN=rpl32-A PE=3 SV=1
Length = 69

Score = 29.3 bits (64), Expect = 9.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1

Query: 352 LEACALGEILCSGYIHSTFRFFXVTTHYTS*LTENE 459
L+A +LG+ L +G S FRFF + T + S T+N+
Sbjct: 29 LKALSLGKSLSTGNSKSFFRFFSMPTRFFSMPTDNK 64


tr_hit_id B7KDP5
Definition tr|B7KDP5|B7KDP5_9CHRO Putative uncharacterized protein OS=Cyanothece sp. PCC 7424
Align length 48
Score (bit) 33.5
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913470|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_F02.
(487 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7KDP5|B7KDP5_9CHRO Putative uncharacterized protein OS=Cyano... 33 5.5
tr|B2RX19|B2RX19_MOUSE Gene model 114, (NCBI) OS=Mus musculus GN... 33 9.1
tr|A2AUS7|A2AUS7_MOUSE Novel protein (Fragment) OS=Mus musculus ... 33 9.1
tr|Q6WG73|Q6WG73_HUMAN Antigen MLAA-23 OS=Homo sapiens PE=2 SV=1 33 9.1
tr|Q7S5V7|Q7S5V7_NEUCR Putative uncharacterized protein OS=Neuro... 33 9.1

>tr|B7KDP5|B7KDP5_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. PCC 7424 GN=PCC7424_1915 PE=4 SV=1
Length = 474

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2

Query: 164 NLFHFYLVIVAVSLPPCLWRAGCSKRGHVRLFLKQYIVLIRCKGVRCL 307
NLF F+L ++AV P LW ++ G+V F ++++ CK + L
Sbjct: 143 NLFDFHLDVIAV--PAILWGVLAARLGYVGWFCVAIVIILGCKAILSL 188


>tr|B2RX19|B2RX19_MOUSE Gene model 114, (NCBI) OS=Mus musculus
GN=Ncrna00153 PE=2 SV=1
Length = 695

Score = 32.7 bits (73), Expect = 9.1
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3

Query: 281 LRQCTASEKALHDPSYYNRHATSKAVDSLQQSLNRNETGSSDLLDSMHRVSVY*ACLLST 102
LRQ +A+ L PSYY R V LQQ+L +E DL D ++ + C
Sbjct: 12 LRQASATSAPLASPSYYER------VGQLQQALRDSEKKRLDLEDKLYEYNKSDKCRAKL 65

Query: 101 VC 96
C
Sbjct: 66 KC 67


>tr|A2AUS7|A2AUS7_MOUSE Novel protein (Fragment) OS=Mus musculus
GN=Ncrna00153 PE=4 SV=1
Length = 207

Score = 32.7 bits (73), Expect = 9.1
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3

Query: 281 LRQCTASEKALHDPSYYNRHATSKAVDSLQQSLNRNETGSSDLLDSMHRVSVY*ACLLST 102
LRQ +A+ L PSYY R V LQQ+L +E DL D ++ + C
Sbjct: 12 LRQASATSAPLASPSYYER------VGQLQQALRDSEKKRLDLEDKLYEYNKSDKCRAKL 65

Query: 101 VC 96
C
Sbjct: 66 KC 67


>tr|Q6WG73|Q6WG73_HUMAN Antigen MLAA-23 OS=Homo sapiens PE=2 SV=1
Length = 158

Score = 32.7 bits (73), Expect = 9.1
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = -3

Query: 281 LRQCTASEKALHDPSYYNRHATSKAVDSLQQSLNRNETGSSDLLDSMHRVSVY*ACLLST 102
LRQ +A+ L PSYY R V LQQ+L +E DL D ++ + C
Sbjct: 12 LRQASATSAPLASPSYYER------VGQLQQALRDSEKKRLDLEDKLYEYNKSDKCRAKL 65

Query: 101 VC 96
C
Sbjct: 66 KC 67


>tr|Q7S5V7|Q7S5V7_NEUCR Putative uncharacterized protein
OS=Neurospora crassa GN=NCU07060 PE=4 SV=1
Length = 211

Score = 32.7 bits (73), Expect = 9.1
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = -3

Query: 386 LHKISPKAQASSKVNLLVQQMLSNDPLST*PPY-----I*LRQCTASEKALHDPSYYNRH 222
LH I+P+ S+ + Q N+P +T P L Q AL P+ NR+
Sbjct: 32 LHNIAPEPSTSTSNSSQSQSQHHNNPHATPNPVDLAALYRLLQDQMGVLALSAPTDENRN 91

Query: 221 ATSKAVDSLQQSLNRNETG----SSDLLDSMHRV 132
+ +DSL++ ++R T S + LD + RV
Sbjct: 92 FLNSLIDSLEEDIHRPPTQIEGVSQEFLDGLDRV 125