BP913486
Clone id YMU001_000030_G06
Library
Length 577
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGTCTTCTCTGGTGGTCTGGGTTCCTGCTTACAATTACTGTTTAATTTTAGCATGCATGA
CATGAATCTTTAGCTACAGACCGTTCGTAAAACAGCAGAGTAGCTTGAGCCATTAGCACC
TCCTCTTCGGTTACCAAAGTCACATGTGAATCAGAAACTCGAAACCAAAGCACAATAACC
TCTTTAGACGGTTGCTTTGACTCTGGATCCTCCACCTCCAAACTTTCAGTGTGAGCATCC
TCTTCAAACCCAAGCTCTTTGTCGGAGTTTAAAGTCTGCCTTGATGAGAACTTGCTGTCA
ACAATAGCATGCCCAGTCGGCAATCCCTGACTAGATCCTATAGAGGCCCTGGACGCCCCA
CTTATACCCTCACCTCTATCATTATTCAATGCTTTTGGCCCCAGGCCAATTGAGATCCGT
TCTAATTTCCTCTCTGCAGAGGATTCTTGTACCATATTCTCCTCAGTTGTCTCTACATCA
TGCTGTTCAGATATGTTATCATCCAAATCCATTGTAACTGAGTTGCTATCATCTGAATTC
ATAACTTCATTGCAACATATGTCAGTCTGGTGTTCTT
■■Homology search results ■■ -
sp_hit_id Q9FPS0
Definition sp|Q9FPS0|UBP27_ARATH Ubiquitin carboxyl-terminal hydrolase 27 OS=Arabidopsis thaliana
Align length 48
Score (bit) 42.4
E-value 0.002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913486|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G06.
(577 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FPS0|UBP27_ARATH Ubiquitin carboxyl-terminal hydrolase 27 O... 42 0.002
sp|Q8K387|UBP45_MOUSE Ubiquitin carboxyl-terminal hydrolase 45 O... 40 0.008
sp|Q9FPT5|UBP1_ARATH Ubiquitin carboxyl-terminal hydrolase 1 OS=... 40 0.011
sp|Q9Y5T5|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 O... 39 0.024
sp|Q70EL2|UBP45_HUMAN Ubiquitin carboxyl-terminal hydrolase 45 O... 37 0.071
sp|Q8W4N3|UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2 OS=... 36 0.16
sp|P50102|UBP8_YEAST Ubiquitin carboxyl-terminal hydrolase 8 OS=... 35 0.21
sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=... 35 0.21
sp|Q6BSE7|FKBP3_DEBHA FK506-binding protein 3 OS=Debaryomyces ha... 34 0.60
sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=... 32 1.7
sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 O... 32 1.7
sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 O... 32 1.7
sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 O... 32 2.3
sp|Q09738|UBP8_SCHPO Probable ubiquitin carboxyl-terminal hydrol... 32 3.0
sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 O... 32 3.0
sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=... 31 3.9
sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=... 31 3.9
sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=... 31 3.9
sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=... 31 3.9
sp|Q9H0E7|UBP44_HUMAN Ubiquitin carboxyl-terminal hydrolase 44 O... 31 3.9
sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=... 31 3.9
sp|Q8TEY7|UBP33_HUMAN Ubiquitin carboxyl-terminal hydrolase 33 O... 31 3.9
sp|Q70CQ3|UBP30_HUMAN Ubiquitin carboxyl-terminal hydrolase 30 O... 31 3.9
sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydro... 31 3.9
sp|Q9R049|AMFR_MOUSE Autocrine motility factor receptor OS=Mus m... 31 5.1
sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=... 30 6.6
sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=... 30 6.6
sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 O... 30 6.6
sp|Q08693|TRE2_YEAST Putative zinc metalloprotease TRE2 OS=Sacch... 30 6.6
sp|Q5AM72|PLPL_CANAL Patatin-like phospholipase domain-containin... 30 8.6

>sp|Q9FPS0|UBP27_ARATH Ubiquitin carboxyl-terminal hydrolase 27
OS=Arabidopsis thaliana GN=UBP27 PE=2 SV=1
Length = 494

Score = 42.4 bits (98), Expect = 0.002
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -3

Query: 224 SLEVEDPESKQPSKEVIVLWFRVSDSHVTLVTEEEVLMAQATLLFYER 81
S+ V E ++ + + WF +SDS V V+E +VL A+A+LLFYER
Sbjct: 446 SVRVFSQEEEEEDCDEDLSWFSISDSEVCRVSESDVLGAEASLLFYER 493


>sp|Q8K387|UBP45_MOUSE Ubiquitin carboxyl-terminal hydrolase 45
OS=Mus musculus GN=Usp45 PE=2 SV=1
Length = 813

Score = 40.0 bits (92), Expect = 0.008
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -3

Query: 197 KQPSKEVIVLWFRVSDSHVTLVTEEEVLMAQATLLFYER 81
K+P E+ W VSD++V +V E L AQA LLFYER
Sbjct: 773 KEPDGELGGHWVHVSDTYVQVVPESRALSAQAYLLFYER 811


>sp|Q9FPT5|UBP1_ARATH Ubiquitin carboxyl-terminal hydrolase 1
OS=Arabidopsis thaliana GN=UBP1 PE=1 SV=2
Length = 1083

Score = 39.7 bits (91), Expect = 0.011
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -3

Query: 218 EVEDPESKQPSKEVIVLWFRVSDSHVTLVTEEEVLMAQATLLFYER 81
E D ++K+P+ + W+ SDS V + EEVL ++A +LFYER
Sbjct: 1040 ERRDSDTKEPNSSI---WYHASDSQVRPASLEEVLRSEAYILFYER 1082


>sp|Q9Y5T5|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16
OS=Homo sapiens GN=USP16 PE=1 SV=1
Length = 823

Score = 38.5 bits (88), Expect = 0.024
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
WF +SD+HV V +VL +QA LLFYER
Sbjct: 793 WFHISDTHVQAVPTTKVLNSQAYLLFYER 821


>sp|Q70EL2|UBP45_HUMAN Ubiquitin carboxyl-terminal hydrolase 45
OS=Homo sapiens GN=USP45 PE=1 SV=2
Length = 814

Score = 37.0 bits (84), Expect = 0.071
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -3

Query: 206 PESKQPSKEVIVLWFRVSDSHVTLVTEEEVLMAQATLLFYER 81
P K E W VSD+++ +V E L AQA LLFYER
Sbjct: 771 PGLKAADSESAGQWVHVSDTYLQVVPESRALSAQAYLLFYER 812


>sp|Q8W4N3|UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2
OS=Arabidopsis thaliana GN=UBP2 PE=1 SV=2
Length = 961

Score = 35.8 bits (81), Expect = 0.16
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYERSVAKD 66
W+ VSD++V V+ E+VL ++A +LFYER +++
Sbjct: 928 WYNVSDAYVRQVSLEKVLHSEAYILFYERIFSQE 961


>sp|P50102|UBP8_YEAST Ubiquitin carboxyl-terminal hydrolase 8
OS=Saccharomyces cerevisiae GN=UBP8 PE=1 SV=1
Length = 471

Score = 35.4 bits (80), Expect = 0.21
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFY 87
WF+ +DS V+ +++EEVL QA LLFY
Sbjct: 439 WFKFNDSMVSSISQEEVLKEQAYLLFY 465


>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3
OS=Homo sapiens GN=USP3 PE=1 SV=2
Length = 520

Score = 35.4 bits (80), Expect = 0.21
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYERSVAK 69
WF +DS VTL EE V+ A+A +LFY AK
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFYVEHQAK 514


>sp|Q6BSE7|FKBP3_DEBHA FK506-binding protein 3 OS=Debaryomyces
hansenii GN=FPR3 PE=3 SV=1
Length = 437

Score = 33.9 bits (76), Expect = 0.60
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 10/130 (7%)
Frame = -3

Query: 539 NSDDSNSVTMDLD----------DNISEQHDVETTEENMVQESSAERKLERISIGLGPKA 390
+S+D ++T D D D++ + D+E E +V+E + K P +
Sbjct: 190 DSEDDYNLTPDEDEIIGGEEYDLDDLEDASDIENKIEELVEEEAQGSKKRNAEEPEAPTS 249

Query: 389 LNNDXXXXXXXXXXXXXXXXXGLPTGHAIVDSKFSSRQTLNSDKELGFEEDAHTESLEVE 210
+ PTG +V+ K + KE +E+ E + E
Sbjct: 250 KKSKKAKKEDKKSVQFTKDLEQGPTGSTLVEEKTEKK----GKKEKAKKEEPKKEEPKKE 305

Query: 209 DPESKQPSKE 180
P+ +QP KE
Sbjct: 306 QPKKEQPKKE 315


>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9
OS=Arabidopsis thaliana GN=UBP9 PE=2 SV=1
Length = 910

Score = 32.3 bits (72), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
W+ DSHV+ V E E+ + A +LFY R
Sbjct: 865 WYHFDDSHVSSVNESEIKNSAAYVLFYRR 893


tr_hit_id B4FF77
Definition tr|B4FF77|B4FF77_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 46
Score (bit) 46.6
E-value 0.001
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913486|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G06.
(577 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4FF77|B4FF77_MAIZE Putative uncharacterized protein OS=Zea m... 47 0.001
tr|Q7QEG4|Q7QEG4_ANOGA Ubiquitin carboxyl-terminal hydrolase OS=... 44 0.006
tr|B0WUI4|B0WUI4_CULQU Ubiquitin carboxyl-terminal hydrolase OS=... 44 0.008
tr|A7SR10|A7SR10_NEMVE Predicted protein (Fragment) OS=Nematoste... 44 0.008
tr|Q7XUT7|Q7XUT7_ORYSA OSJNBa0042L16.10 protein OS=Oryza sativa ... 42 0.024
tr|Q01LG4|Q01LG4_ORYSA Ubiquitin carboxyl-terminal hydrolase OS=... 42 0.024
tr|B8ATS8|B8ATS8_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.024
tr|A3ATY1|A3ATY1_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.024
tr|B6N4E2|B6N4E2_BRAFL Putative uncharacterized protein OS=Branc... 42 0.024
tr|B6N4C0|B6N4C0_BRAFL Putative uncharacterized protein OS=Branc... 42 0.024
tr|B3MR17|B3MR17_DROAN GF21081 OS=Drosophila ananassae GN=GF2108... 42 0.024
tr|A7PKY6|A7PKY6_VITVI Ubiquitin carboxyl-terminal hydrolase OS=... 41 0.041
tr|A5B229|A5B229_VITVI Ubiquitin carboxyl-terminal hydrolase OS=... 41 0.041
tr|Q16QX8|Q16QX8_AEDAE Putative uncharacterized protein (Fragmen... 41 0.041
tr|B3NV43|B3NV43_DROER GG18759 OS=Drosophila erecta GN=GG18759 P... 40 0.070
tr|B4M2Y6|B4M2Y6_DROVI GJ19106 OS=Drosophila virilis GN=GJ19106 ... 40 0.091
tr|Q6ZIC7|Q6ZIC7_ORYSJ Ubiquitin carboxyl-terminal hydrolase OS=... 39 0.16
tr|A2YXC1|A2YXC1_ORYSI Ubiquitin carboxyl-terminal hydrolase OS=... 39 0.16
tr|B4PZQ2|B4PZQ2_DROYA GE16403 OS=Drosophila yakuba GN=GE16403 P... 39 0.16
tr|B4GWI8|B4GWI8_DROPE GL16430 OS=Drosophila persimilis GN=GL164... 39 0.16
tr|B3RX06|B3RX06_TRIAD Putative uncharacterized protein OS=Trich... 39 0.16
tr|Q6PAW2|Q6PAW2_XENLA Ubiquitin carboxyl-terminal hydrolase OS=... 39 0.20
tr|Q0VA64|Q0VA64_XENTR Ubiquitin carboxyl-terminal hydrolase OS=... 39 0.20
tr|Q08DA3|Q08DA3_BOVIN Ubiquitin carboxyl-terminal hydrolase OS=... 39 0.20
tr|Q9W4C3|Q9W4C3_DROME Ubiquitin carboxyl-terminal hydrolase OS=... 39 0.20
tr|Q29I81|Q29I81_DROPS Ubiquitin carboxyl-terminal hydrolase OS=... 39 0.20
tr|B4MT42|B4MT42_DROWI GK19779 OS=Drosophila willistoni GN=GK197... 39 0.20
tr|B4JX02|B4JX02_DROGR GH17857 OS=Drosophila grimshawi GN=GH1785... 39 0.20
tr|B6JWG6|B6JWG6_SCHJP Ubiquitin C-terminal hydrolase Ubp7 OS=Sc... 39 0.20
tr|Q4R6G7|Q4R6G7_MACFA Testis cDNA, clone: QtsA-18064, similar t... 39 0.27

>tr|B4FF77|B4FF77_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 504

Score = 46.6 bits (109), Expect = 0.001
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Frame = -3

Query: 209 DPESKQPSKEVIVL---WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
+P+ P K V L WF +SD +V+ V EE+VL A+ATLLFYER
Sbjct: 458 NPDPDDPGKPVAGLGKRWFYISDGYVSEVPEEDVLRAEATLLFYER 503


>tr|Q7QEG4|Q7QEG4_ANOGA Ubiquitin carboxyl-terminal hydrolase
OS=Anopheles gambiae GN=AGAP000666 PE=3 SV=4
Length = 956

Score = 43.9 bits (102), Expect = 0.006
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Frame = -3

Query: 299 DSKFSSRQTLNSDKELGFEEDAHTESLEVED----------PESKQPSKEVIV---LWFR 159
D FSS T + + E G + + ++ P+++ ++EV W+
Sbjct: 869 DDSFSSSHTPSDNDECGRKRSQPRDRQPQDELEGAVGYAHKPQARPAAEEVETPPGKWYC 928

Query: 158 VSDSHVTLVTEEEVLMAQATLLFYER 81
VSDS+V VTEE VL QA LLFYER
Sbjct: 929 VSDSYVREVTEESVLKVQAYLLFYER 954


>tr|B0WUI4|B0WUI4_CULQU Ubiquitin carboxyl-terminal hydrolase OS=Culex
quinquefasciatus GN=CpipJ_CPIJ010867 PE=3 SV=1
Length = 920

Score = 43.5 bits (101), Expect = 0.008
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Frame = -3

Query: 299 DSKFSSRQTLNSDKELGFEEDAHTESLEVEDPESKQPSKEVIV-------LWFRVSDSHV 141
D+ SS T +S G D E E P E++ W+ VSDSHV
Sbjct: 843 DALTSSSSTSSSRSSTGTTSDGE----ECEGAVGYTPKPELLPDVDPPPGKWYYVSDSHV 898

Query: 140 TLVTEEEVLMAQATLLFYER 81
TE+ VL AQA LLFYER
Sbjct: 899 RETTEDSVLNAQAYLLFYER 918


>tr|A7SR10|A7SR10_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g128208 PE=4 SV=1
Length = 228

Score = 43.5 bits (101), Expect = 0.008
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = -3

Query: 323 LPTGHAIVDSKFSSRQTLNSDKEL--GFEEDAHTESLEVEDPESKQPSKEVIV-LWFRVS 153
L +GH K S+ TL+ ++++ E +A+ E K S+ V W+ VS
Sbjct: 136 LNSGHYTAYIKLKSKPTLDLNRDIRNSRELEAYIRETWNEAHAQKCTSQGVPQGQWYYVS 195

Query: 152 DSHVTLVTEEEVLMAQATLLFYER 81
DSH LV E VL +QA +LFYER
Sbjct: 196 DSHSVLVPESRVLRSQAYMLFYER 219


>tr|Q7XUT7|Q7XUT7_ORYSA OSJNBa0042L16.10 protein OS=Oryza sativa
GN=OSJNBa0042L16.10 PE=4 SV=3
Length = 1153

Score = 42.0 bits (97), Expect = 0.024
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
W VSD HV+ V+E EVL A+ATLLFYER
Sbjct: 1124 WLYVSDDHVSHVSECEVLAAEATLLFYER 1152


>tr|Q01LG4|Q01LG4_ORYSA Ubiquitin carboxyl-terminal hydrolase
OS=Oryza sativa GN=OSIGBa0093L02.3 PE=3 SV=1
Length = 538

Score = 42.0 bits (97), Expect = 0.024
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
W VSD HV+ V+E EVL A+ATLLFYER
Sbjct: 509 WLYVSDDHVSHVSECEVLAAEATLLFYER 537


>tr|B8ATS8|B8ATS8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_15919 PE=4 SV=1
Length = 463

Score = 42.0 bits (97), Expect = 0.024
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
W VSD HV+ V+E EVL A+ATLLFYER
Sbjct: 434 WLYVSDDHVSHVSECEVLAAEATLLFYER 462


>tr|A3ATY1|A3ATY1_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_014253 PE=4 SV=1
Length = 1143

Score = 42.0 bits (97), Expect = 0.024
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
W VSD HV+ V+E EVL A+ATLLFYER
Sbjct: 1114 WLYVSDDHVSHVSECEVLAAEATLLFYER 1142


>tr|B6N4E2|B6N4E2_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_90534 PE=4 SV=1
Length = 948

Score = 42.0 bits (97), Expect = 0.024
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
W+ +SD+HV+ V+E +VL AQA LLFYER
Sbjct: 917 WYHISDTHVSEVSESKVLNAQAFLLFYER 945


>tr|B6N4C0|B6N4C0_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_125916 PE=4 SV=1
Length = 1090

Score = 42.0 bits (97), Expect = 0.024
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3

Query: 167 WFRVSDSHVTLVTEEEVLMAQATLLFYER 81
W+ +SD+HV+ V+E +VL AQA LLFYER
Sbjct: 1059 WYHISDTHVSEVSESKVLNAQAFLLFYER 1087