BP913487
Clone id YMU001_000030_G07
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_G07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGACAGATGGGGAAGGGCCACATTGAGGGAATGGTGCTTCCAGTGAGGCTTTAACAGCCA
TGTAAAGCTTTGCTTTGTAAGTAGAAGAGATTGATGAGTAGATCTGCATCATAATCATAA
GTCTATCGTGCAGCAAATGAATATCAATGGGATTCTTGTTCTTTCTCTGGTGCTGAAGGC
CTGTGGCTATTTTGAGTCAAATTTGGAGGTGCTTCCATCGTCATTCCTAAGGCGTTTGTC
GCCGATTAAAATGACAATTGCGTGATGTTTGGAAGACGGGAGCGAGGTCAATACTTCTGC
TGTGGTTGTGAAGGTGTTCGTAGTTCCATCAAGCTAGAGCATTGAAGGAAACCCTTAAAG
GGAGTAAGAGTGGTTTAGGCCCCCCAATACTTCTGTCCTGGCAAGCTAAACACATGTTAC
CTGAGGGCCTTACATTCATGTGGATTGCTTCCTTTCTAAAAGAGATCTGAGAAGACAGAC
CATGCTACAGGTAGACTACACCTGTGGATTATGAATCAAAGTACAGGATGTGGCTTACAT
GGTGTTACCATTACATTCTGAGTGTTACCATTAAACTCTCAAGCTTA
■■Homology search results ■■ -
sp_hit_id Q9ULI3
Definition sp|Q9ULI3|HEG1_HUMAN Protein HEG homolog 1 OS=Homo sapiens
Align length 70
Score (bit) 33.5
E-value 0.81
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913487|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G07.
(587 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9ULI3|HEG1_HUMAN Protein HEG homolog 1 OS=Homo sapiens GN=HE... 33 0.81
sp|Q6EU49|WNK4_ORYSJ Probable serine/threonine-protein kinase WN... 31 4.0
sp|Q5BKN8|THIL_XENTR Acetyl-CoA acetyltransferase, mitochondrial... 31 5.2
sp|Q9U357|PEN2_CAEEL Gamma-secretase subunit pen-2 OS=Caenorhabd... 31 5.2
sp|Q6NU46|THILA_XENLA Acetyl-CoA acetyltransferase A, mitochondr... 30 8.9

>sp|Q9ULI3|HEG1_HUMAN Protein HEG homolog 1 OS=Homo sapiens GN=HEG1
PE=1 SV=3
Length = 1381

Score = 33.5 bits (75), Expect = 0.81
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -1

Query: 374 TTLTPFKGFLQCSSLMELRTPSQP-QQKY*PRSRLPNITQLSF*SATNALGMTMEAPPNL 198
+T+T F L S +L++ S P Q+K S+ P++ L +T A+ PP+L
Sbjct: 761 STMTSFMTMLHSSQTADLKSQSTPHQEKVITESKSPSLVSLPT-ESTKAVTTNSPLPPSL 819

Query: 197 TQNSHRPSAP 168
T++S + P
Sbjct: 820 TESSTEQTLP 829


>sp|Q6EU49|WNK4_ORYSJ Probable serine/threonine-protein kinase WNK4
OS=Oryza sativa subsp. japonica GN=WNK4 PE=2 SV=1
Length = 612

Score = 31.2 bits (69), Expect = 4.0
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = -2

Query: 478 LSSQISFRKEAIHMNVRPSGNMCLA-CQDRSIGGPKPLLLPL-RVSFNALA*WNYEHLHN 305
L + EA+HM+V + +MC + C+ +GGP +L R + N E L +
Sbjct: 299 LPKSVDVSLEALHMDVDTNESMCTSTCKRNDLGGPHRSVLEFTRTNKNTELKLTGEKLDD 358

Query: 304 HSRSIDL--APVFQTSRNCHF 248
+S S+ L A + +RN HF
Sbjct: 359 NSVSLVLRIADLCGHARNIHF 379


>sp|Q5BKN8|THIL_XENTR Acetyl-CoA acetyltransferase, mitochondrial
OS=Xenopus tropicalis GN=acat1 PE=2 SV=1
Length = 420

Score = 30.8 bits (68), Expect = 5.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2

Query: 104 LHHNHKSIVQQMNINGILVLSLVLKACGYFESNLEVLPSSFL 229
LH+ H+ V Q +N +++ S G F+ +L LP++ L
Sbjct: 19 LHYTHRGHVSQRTLNEVVIASAARTPIGSFQGSLSSLPATKL 60


>sp|Q9U357|PEN2_CAEEL Gamma-secretase subunit pen-2
OS=Caenorhabditis elegans GN=pen-2 PE=2 SV=1
Length = 101

Score = 30.8 bits (68), Expect = 5.2
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = -1

Query: 515 FIIHRCSLPVAWSV-----FSDLF*KGSNPHECKALR*HVFSLPGQKYW 384
F+I C LP+ W V FSD F K N H + + + S+ G +W
Sbjct: 19 FLIGACFLPLVWIVNTFWFFSDAFCKPINAHRRQIRKYVIASIVGSIFW 67


>sp|Q6NU46|THILA_XENLA Acetyl-CoA acetyltransferase A, mitochondrial
OS=Xenopus laevis GN=acat1-A PE=2 SV=1
Length = 420

Score = 30.0 bits (66), Expect = 8.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2

Query: 104 LHHNHKSIVQQMNINGILVLSLVLKACGYFESNLEVLPSSFL 229
LH+ H++ Q +N +++ S G F+ L LP++ L
Sbjct: 19 LHNTHRNFASQRTLNEVVIASAARTPIGSFQGTLSSLPATKL 60


tr_hit_id B5EHG1
Definition tr|B5EHG1|B5EHG1_GEOBB Cytochrome C family protein OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
Align length 32
Score (bit) 33.5
E-value 9.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913487|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G07.
(587 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5EHG1|B5EHG1_GEOBB Cytochrome C family protein OS=Geobacter ... 33 9.1

>tr|B5EHG1|B5EHG1_GEOBB Cytochrome C family protein OS=Geobacter
bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
GN=Gbem_1152 PE=3 SV=1
Length = 1009

Score = 33.5 bits (75), Expect = 9.1
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -2

Query: 424 SGNMCLACQDRS---IGGPKPLLLPLRVSFNA 338
+G CL+C DR+ IGG L+ PL VSFNA
Sbjct: 719 AGKGCLSCHDRNQRHIGGAGRLIAPLTVSFNA 750