BP913488 |
Clone id |
YMU001_000030_G08 |
Library |
YMU01 |
Length |
548 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000030_G08. |
Accession |
BP913488 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AACTTAACTTATCTCCTTTCAAAGAGACGAAATACAACCTTAGTCTCAAGTCTCAGCAGC TGAGCCTCATGTGCTGCCAATACCAATTTAATTTCGATAAGCCATCATCCCTGCACCTCT ACATCTACTGCGCCAATATGACTATCTATGAAAGCCAAGCAACTTCTTCGCGTGCCAATC ACCTTCGGTCTTGTCTCCTCTCTTCTGTGCATTCCAATCACCTTCAGTCTGTTCTCGTCT GCTAAAAAACTAAAAGATCTGATCCTCGTTCTTGCAGCCAAGCCTTATATGCAACCATTG GTAAGCGATTCCTTTCAATCAGGCGTTCATACAGTTCAAGTAGAAGACTAGGGTCCTTTT TGGCATAAATCTGGTACTCTTCAAGAAGAAACAGGTGTTCTATATCTTGGGACACAAAAT CCAGCACCGCAGCATGCAAAACCTGTGAGCCAAATTTCCTTGCCAGCTCCAGAATGCTAA TGGCATTATGGGCACCAATGTTCTTCGCAATGGCATCCTCACATACTATCCGCAGCAATG CAATATCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9NF14 |
Definition |
sp|Q9NF14|BAT40_CAEEL BTB and MATH domain-containing protein 40 OS=Caenorhabditis elegans |
Align length |
65 |
Score (bit) |
36.2 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T0I9 |
Definition |
tr|A9T0I9|A9T0I9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
66 |
Score (bit) |
41.6 |
E-value |
0.028 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913488|Adiantum capillus-veneris mRNA, clone: YMU001_000030_G08. (548 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T0I9|A9T0I9_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.028 tr|A9S4Q5|A9S4Q5_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.080 tr|B3S9B2|B3S9B2_TRIAD Putative uncharacterized protein OS=Trich... 39 0.14 tr|Q53NR9|Q53NR9_ORYSJ BTB/POZ domain containing protein OS=Oryz... 39 0.18 tr|A3CAX7|A3CAX7_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.18 tr|A2ZDV3|A2ZDV3_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.18 tr|A0D9R2|A0D9R2_PARTE Chromosome undetermined scaffold_42, whol... 38 0.31 tr|A0C020|A0C020_PARTE Chromosome undetermined scaffold_14, whol... 38 0.31 tr|B8LMS2|B8LMS2_PICSI Putative uncharacterized protein OS=Picea... 38 0.40 tr|Q3UTC4|Q3UTC4_MOUSE Putative uncharacterized protein OS=Mus m... 37 0.52 tr|A7Q3S6|A7Q3S6_VITVI Chromosome chr13 scaffold_48, whole genom... 37 0.68 tr|A9NPG7|A9NPG7_PICSI Putative uncharacterized protein OS=Picea... 37 0.89 tr|B8A0Y1|B8A0Y1_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.2 tr|Q05AE5|Q05AE5_MOUSE TD and POZ domain containing 1 OS=Mus mus... 35 2.0 tr|Q6Z9Y0|Q6Z9Y0_ORYSJ Os08g0406500 protein OS=Oryza sativa subs... 35 2.0 tr|A2YV42|A2YV42_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.0 tr|A2YV39|A2YV39_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.0 tr|Q5BJL3|Q5BJL3_RAT Spop protein (Fragment) OS=Rattus norvegicu... 35 2.6 tr|Q3THQ1|Q3THQ1_MOUSE Putative uncharacterized protein OS=Mus m... 35 2.6 tr|B2RYD9|B2RYD9_RAT Spop protein (Speckle-type POZ protein, iso... 35 2.6 tr|A0JLP8|A0JLP8_MOUSE Spop protein (Fragment) OS=Mus musculus G... 35 2.6 tr|Q9LQ95|Q9LQ95_ARATH T1N6.2 protein OS=Arabidopsis thaliana GN... 35 2.6 tr|Q7XA69|Q7XA69_ARATH At3g01790 (Putative uncharacterized prote... 35 2.6 tr|B6U0D1|B6U0D1_MAIZE TD and POZ domain-containing protein 2 OS... 35 2.6 tr|Q4R709|Q4R709_MACFA Testis cDNA, clone: QtsA-16661, similar t... 35 2.6 tr|B6L0D1|B6L0D1_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6 tr|B6L0B4|B6L0B4_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6 tr|B4E088|B4E088_HUMAN cDNA FLJ51172, highly similar to Speckle-... 35 2.6 tr|B4DUE7|B4DUE7_HUMAN cDNA FLJ51096, highly similar to Speckle-... 35 2.6 tr|B4DEE4|B4DEE4_HUMAN cDNA FLJ53827, highly similar to Speckle-... 35 2.6
>tr|A9T0I9|A9T0I9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_231894 PE=4 SV=1 Length = 696
Score = 41.6 bits (96), Expect = 0.028 Identities = 21/66 (31%), Positives = 38/66 (57%) Frame = -2
Query: 547 DIALLRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQI 368 ++ L +VCED++ KN+ + N ISI ++A+K S AVL ++ + L EY+ Sbjct: 192 NVQFLEVVCEDSLVKNMTSDNVISIFDVAKKHCSSGCKEAVLK-KARSLGELSSFTEYKF 250
Query: 367 YAKKDP 350 + + +P Sbjct: 251 FTQSNP 256
>tr|A9S4Q5|A9S4Q5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74560 PE=4 SV=1 Length = 661
Score = 40.0 bits (92), Expect = 0.080 Identities = 20/65 (30%), Positives = 34/65 (52%) Frame = -2
Query: 544 IALLRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIY 365 + L VCED + N+ NAIS ++ +K S + +VL + + + +EY+ Y Sbjct: 225 VQFLAEVCEDTLVSNLSRQNAISTFDIVKKHCSSAVRESVL-VKAMKMGEISTYDEYKHY 283
Query: 364 AKKDP 350 +KDP Sbjct: 284 TQKDP 288
>tr|B3S9B2|B3S9B2_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_50945 PE=4 SV=1 Length = 364
Score = 39.3 bits (90), Expect = 0.14 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -2
Query: 547 DIALLRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQ 371 D+ L+ +CE++I+ N+ NA +L +A S+VL VL+F++ + E YQ Sbjct: 269 DLQRLKSLCENSISNNLTVENAAKVLIIADMHNSEVLRQNVLEFINSHALEIVETEGYQ 327
>tr|Q53NR9|Q53NR9_ORYSJ BTB/POZ domain containing protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g24550 PE=4 SV=1 Length = 374
Score = 38.9 bits (89), Expect = 0.18 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -2
Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410 L+++CEDA+ +++ S L A K G +VL AA LDF+S Sbjct: 298 LQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFLS 339
>tr|A3CAX7|A3CAX7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_032449 PE=4 SV=1 Length = 334
Score = 38.9 bits (89), Expect = 0.18 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -2
Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410 L+++CEDA+ +++ S L A K G +VL AA LDF+S Sbjct: 258 LQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFLS 299
>tr|A2ZDV3|A2ZDV3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35967 PE=4 SV=1 Length = 374
Score = 38.9 bits (89), Expect = 0.18 Identities = 18/42 (42%), Positives = 27/42 (64%) Frame = -2
Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410 L+++CEDA+ +++ S L A K G +VL AA LDF+S Sbjct: 298 LQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFLS 339
>tr|A0D9R2|A0D9R2_PARTE Chromosome undetermined scaffold_42, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00014710001 PE=4 SV=1 Length = 537
Score = 38.1 bits (87), Expect = 0.31 Identities = 18/60 (30%), Positives = 34/60 (56%) Frame = -2
Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356 L+ +CED + KNI N I ++ LA KF +Q L A + F+ + + + ++ + +K+ Sbjct: 468 LKNLCEDHLIKNISLKNVIEVVNLADKFSAQELKANAMIFLLDNKQKILNTQDINMLSKE 527
>tr|A0C020|A0C020_PARTE Chromosome undetermined scaffold_14, whole genome shotgun sequence OS=Paramecium tetraurelia GN=GSPATT00005990001 PE=4 SV=1 Length = 529
Score = 38.1 bits (87), Expect = 0.31 Identities = 18/60 (30%), Positives = 34/60 (56%) Frame = -2
Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356 L+ +CED + KNI N I ++ LA KF +Q L A + F+ + + + ++ + +K+ Sbjct: 460 LKNLCEDHLIKNISLKNVIDVVNLADKFSAQELKANAMIFLLDNKQKILNTQDINMLSKE 519
>tr|B8LMS2|B8LMS2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 390
Score = 37.7 bits (86), Expect = 0.40 Identities = 19/63 (30%), Positives = 34/63 (53%) Frame = -2
Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356 LR +CE I++ I ILELA+++ + L +A L F + ++E + E ++ + Sbjct: 313 LRWLCESRISQGITVSTVAKILELAQRYQASQLKSACLKFAASNLEEVMKSEGFEYLKEN 372
Query: 355 DPS 347 PS Sbjct: 373 CPS 375
>tr|Q3UTC4|Q3UTC4_MOUSE Putative uncharacterized protein OS=Mus musculus GN=ENSMUSG00000074424 PE=2 SV=1 Length = 357
Score = 37.4 bits (85), Expect = 0.52 Identities = 18/62 (29%), Positives = 32/62 (51%) Frame = -2
Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356 L ++CEDA+++N+ NA L LA +Q L LDF++ + E++ + Sbjct: 275 LMVLCEDALSRNLSVENAAHTLILADLHSTQQLKTQALDFIALHASKVCETSEWKSMVES 334
Query: 355 DP 350 +P Sbjct: 335 NP 336
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