BP913488
Clone id YMU001_000030_G08
Library
Length 548
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACTTAACTTATCTCCTTTCAAAGAGACGAAATACAACCTTAGTCTCAAGTCTCAGCAGC
TGAGCCTCATGTGCTGCCAATACCAATTTAATTTCGATAAGCCATCATCCCTGCACCTCT
ACATCTACTGCGCCAATATGACTATCTATGAAAGCCAAGCAACTTCTTCGCGTGCCAATC
ACCTTCGGTCTTGTCTCCTCTCTTCTGTGCATTCCAATCACCTTCAGTCTGTTCTCGTCT
GCTAAAAAACTAAAAGATCTGATCCTCGTTCTTGCAGCCAAGCCTTATATGCAACCATTG
GTAAGCGATTCCTTTCAATCAGGCGTTCATACAGTTCAAGTAGAAGACTAGGGTCCTTTT
TGGCATAAATCTGGTACTCTTCAAGAAGAAACAGGTGTTCTATATCTTGGGACACAAAAT
CCAGCACCGCAGCATGCAAAACCTGTGAGCCAAATTTCCTTGCCAGCTCCAGAATGCTAA
TGGCATTATGGGCACCAATGTTCTTCGCAATGGCATCCTCACATACTATCCGCAGCAATG
CAATATCA
■■Homology search results ■■ -
sp_hit_id Q9NF14
Definition sp|Q9NF14|BAT40_CAEEL BTB and MATH domain-containing protein 40 OS=Caenorhabditis elegans
Align length 65
Score (bit) 36.2
E-value 0.11
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913488|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G08.
(548 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9NF14|BAT40_CAEEL BTB and MATH domain-containing protein 40 ... 36 0.11
sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=... 36 0.14
sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii GN... 35 0.24
sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus GN... 35 0.24
sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens GN... 35 0.24
sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=S... 35 0.24
sp|A2BGD5|CACO1_DANRE Calcium-binding and coiled-coil domain-con... 34 0.41
sp|Q717B4|TDPZ3_MOUSE TD and POZ domain-containing protein 3 OS=... 34 0.53
sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropica... 33 0.69
sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus muscu... 33 0.69
sp|Q6IQ16|SPOPL_HUMAN Speckle-type POZ protein-like OS=Homo sapi... 33 0.69
sp|Q0IHH9|SPOPB_XENLA Speckle-type POZ protein B OS=Xenopus laev... 33 0.69
sp|Q7ZX06|SPOPA_XENLA Speckle-type POZ protein A OS=Xenopus laev... 33 0.69
sp|Q7T330|SPOP_DANRE Speckle-type POZ protein OS=Danio rerio GN=... 33 1.2
sp|Q6GR09|SPOPL_XENLA Speckle-type POZ protein-like OS=Xenopus l... 33 1.2
sp|A0JMG1|SPOLB_DANRE Speckle-type POZ protein-like B OS=Danio r... 33 1.2
sp|Q6YCH2|TDPZ4_MOUSE TD and POZ domain-containing protein 4 OS=... 32 1.5
sp|Q717B2|TDPZ2_MOUSE TD and POZ domain-containing protein 2 OS=... 31 3.4
sp|Q5BL35|SPOLA_DANRE Speckle-type POZ protein-like A OS=Danio r... 31 3.4
sp|Q6YCH1|TDPZ5_MOUSE TD and POZ domain-containing protein 5 OS=... 31 4.5
sp|Q8NAB2|KBTB3_HUMAN Kelch repeat and BTB domain-containing pro... 31 4.5
sp|P39058|CEFG_CEPAC Acetyl-CoA--deacetylcephalosporin C acetylt... 31 4.5
sp|Q9VFP2|RDX_DROME Protein roadkill OS=Drosophila melanogaster ... 30 5.9
sp|Q5R663|KBTB3_PONAB Kelch repeat and BTB domain-containing pro... 30 5.9
sp|Q8BHI4|KBTB3_MOUSE Kelch repeat and BTB domain-containing pro... 30 5.9
sp|Q8BMK0|CCD21_MOUSE Coiled-coil domain-containing protein 21 O... 30 7.7

>sp|Q9NF14|BAT40_CAEEL BTB and MATH domain-containing protein 40
OS=Caenorhabditis elegans GN=bath-40 PE=1 SV=1
Length = 402

Score = 36.2 bits (82), Expect = 0.11
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = -2

Query: 544 IALLRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIY 365
I L++ CE + + +N + + A ++ + VL+ A +DF + +H+ L ++ +
Sbjct: 312 ILALKMTCEQHLLDRLNVNNVLECITHAERYNTDVLYDACVDFAIHNRQHVMALTSWRNF 371

Query: 364 AKKDP 350
+P
Sbjct: 372 ISDEP 376


>sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=Mus
musculus GN=Tdpoz1 PE=2 SV=2
Length = 365

Score = 35.8 bits (81), Expect = 0.14
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356
L+++CEDA+ +N+ NA L LA ++ L LDF++ + E++ +
Sbjct: 275 LKVLCEDALCRNLSVKNATHTLILADLHSTEKLKTQALDFIAYYASEVCETSEWKSMVES 334

Query: 355 DP 350
P
Sbjct: 335 HP 336


>sp|Q5NVK7|SPOP_PONAB Speckle-type POZ protein OS=Pongo abelii
GN=SPOP PE=2 SV=1
Length = 374

Score = 35.0 bits (79), Expect = 0.24
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CEDA+ N+ NA IL LA + L +DF++
Sbjct: 285 LKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326


>sp|Q6ZWS8|SPOP_MOUSE Speckle-type POZ protein OS=Mus musculus
GN=Spop PE=1 SV=1
Length = 374

Score = 35.0 bits (79), Expect = 0.24
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CEDA+ N+ NA IL LA + L +DF++
Sbjct: 285 LKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326


>sp|O43791|SPOP_HUMAN Speckle-type POZ protein OS=Homo sapiens
GN=SPOP PE=1 SV=1
Length = 374

Score = 35.0 bits (79), Expect = 0.24
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CEDA+ N+ NA IL LA + L +DF++
Sbjct: 285 LKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326


>sp|Q0VCW1|SPOP_BOVIN Speckle-type POZ protein OS=Bos taurus GN=SPOP
PE=2 SV=1
Length = 374

Score = 35.0 bits (79), Expect = 0.24
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CEDA+ N+ NA IL LA + L +DF++
Sbjct: 285 LKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326


>sp|A2BGD5|CACO1_DANRE Calcium-binding and coiled-coil
domain-containing protein 1 OS=Danio rerio GN=calcoco1
PE=3 SV=1
Length = 640

Score = 34.3 bits (77), Expect = 0.41
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1

Query: 295 PLVSDSFQSGVHTVQ-VED*GPFWHKSGTLQEETGVLYLGTQNPAPQHAKPVSQISLPAP 471
PL+SDS +Q GP H S Q ++ +L T P+P+H V IS PAP
Sbjct: 525 PLLSDSEDENPEALQDTHSSGPLNHYSLCEQPQSDLLLPATPPPSPRHPSTV-VISQPAP 583

Query: 472 EC*WHYGHQCSSQWHPHILSAAMQY 546
HQ S++ H H + +Y
Sbjct: 584 ---LSSPHQPSARSHTHSSESEEEY 605


>sp|Q717B4|TDPZ3_MOUSE TD and POZ domain-containing protein 3 OS=Mus
musculus GN=Tdpoz3 PE=2 SV=1
Length = 365

Score = 33.9 bits (76), Expect = 0.53
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CED + +N+ NA L LA ++ L + LDF++
Sbjct: 275 LKVLCEDVLCRNLSVKNAAHTLILAELNSTEKLKSQALDFIA 316


>sp|Q6P8B3|SPOP_XENTR Speckle-type POZ protein OS=Xenopus tropicalis
GN=spop PE=2 SV=1
Length = 374

Score = 33.5 bits (75), Expect = 0.69
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CE+A+ N+ NA IL LA + L +DF++
Sbjct: 285 LKVMCEEALCSNLSVENAAEILILADLHSADQLKTQAVDFIN 326


>sp|Q2M2N2|SPOPL_MOUSE Speckle-type POZ protein-like OS=Mus musculus
GN=Spopl PE=2 SV=2
Length = 392

Score = 33.5 bits (75), Expect = 0.69
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQ 407
L+++CE+A+ N+ N L LA ++ L A +DF+++
Sbjct: 285 LKVMCEEALCSNLSVENVADTLVLADLHSAEQLKAQAIDFINR 327


tr_hit_id A9T0I9
Definition tr|A9T0I9|A9T0I9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 66
Score (bit) 41.6
E-value 0.028
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913488|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G08.
(548 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9T0I9|A9T0I9_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.028
tr|A9S4Q5|A9S4Q5_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.080
tr|B3S9B2|B3S9B2_TRIAD Putative uncharacterized protein OS=Trich... 39 0.14
tr|Q53NR9|Q53NR9_ORYSJ BTB/POZ domain containing protein OS=Oryz... 39 0.18
tr|A3CAX7|A3CAX7_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.18
tr|A2ZDV3|A2ZDV3_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.18
tr|A0D9R2|A0D9R2_PARTE Chromosome undetermined scaffold_42, whol... 38 0.31
tr|A0C020|A0C020_PARTE Chromosome undetermined scaffold_14, whol... 38 0.31
tr|B8LMS2|B8LMS2_PICSI Putative uncharacterized protein OS=Picea... 38 0.40
tr|Q3UTC4|Q3UTC4_MOUSE Putative uncharacterized protein OS=Mus m... 37 0.52
tr|A7Q3S6|A7Q3S6_VITVI Chromosome chr13 scaffold_48, whole genom... 37 0.68
tr|A9NPG7|A9NPG7_PICSI Putative uncharacterized protein OS=Picea... 37 0.89
tr|B8A0Y1|B8A0Y1_MAIZE Putative uncharacterized protein OS=Zea m... 36 1.2
tr|Q05AE5|Q05AE5_MOUSE TD and POZ domain containing 1 OS=Mus mus... 35 2.0
tr|Q6Z9Y0|Q6Z9Y0_ORYSJ Os08g0406500 protein OS=Oryza sativa subs... 35 2.0
tr|A2YV42|A2YV42_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.0
tr|A2YV39|A2YV39_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.0
tr|Q5BJL3|Q5BJL3_RAT Spop protein (Fragment) OS=Rattus norvegicu... 35 2.6
tr|Q3THQ1|Q3THQ1_MOUSE Putative uncharacterized protein OS=Mus m... 35 2.6
tr|B2RYD9|B2RYD9_RAT Spop protein (Speckle-type POZ protein, iso... 35 2.6
tr|A0JLP8|A0JLP8_MOUSE Spop protein (Fragment) OS=Mus musculus G... 35 2.6
tr|Q9LQ95|Q9LQ95_ARATH T1N6.2 protein OS=Arabidopsis thaliana GN... 35 2.6
tr|Q7XA69|Q7XA69_ARATH At3g01790 (Putative uncharacterized prote... 35 2.6
tr|B6U0D1|B6U0D1_MAIZE TD and POZ domain-containing protein 2 OS... 35 2.6
tr|Q4R709|Q4R709_MACFA Testis cDNA, clone: QtsA-16661, similar t... 35 2.6
tr|B6L0D1|B6L0D1_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6
tr|B6L0B4|B6L0B4_BRAFL Putative uncharacterized protein OS=Branc... 35 2.6
tr|B4E088|B4E088_HUMAN cDNA FLJ51172, highly similar to Speckle-... 35 2.6
tr|B4DUE7|B4DUE7_HUMAN cDNA FLJ51096, highly similar to Speckle-... 35 2.6
tr|B4DEE4|B4DEE4_HUMAN cDNA FLJ53827, highly similar to Speckle-... 35 2.6

>tr|A9T0I9|A9T0I9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_231894 PE=4 SV=1
Length = 696

Score = 41.6 bits (96), Expect = 0.028
Identities = 21/66 (31%), Positives = 38/66 (57%)
Frame = -2

Query: 547 DIALLRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQI 368
++ L +VCED++ KN+ + N ISI ++A+K S AVL ++ + L EY+
Sbjct: 192 NVQFLEVVCEDSLVKNMTSDNVISIFDVAKKHCSSGCKEAVLK-KARSLGELSSFTEYKF 250

Query: 367 YAKKDP 350
+ + +P
Sbjct: 251 FTQSNP 256


>tr|A9S4Q5|A9S4Q5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_74560 PE=4 SV=1
Length = 661

Score = 40.0 bits (92), Expect = 0.080
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = -2

Query: 544 IALLRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIY 365
+ L VCED + N+ NAIS ++ +K S + +VL + + + +EY+ Y
Sbjct: 225 VQFLAEVCEDTLVSNLSRQNAISTFDIVKKHCSSAVRESVL-VKAMKMGEISTYDEYKHY 283

Query: 364 AKKDP 350
+KDP
Sbjct: 284 TQKDP 288


>tr|B3S9B2|B3S9B2_TRIAD Putative uncharacterized protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_50945 PE=4 SV=1
Length = 364

Score = 39.3 bits (90), Expect = 0.14
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = -2

Query: 547 DIALLRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQ 371
D+ L+ +CE++I+ N+ NA +L +A S+VL VL+F++ + E YQ
Sbjct: 269 DLQRLKSLCENSISNNLTVENAAKVLIIADMHNSEVLRQNVLEFINSHALEIVETEGYQ 327


>tr|Q53NR9|Q53NR9_ORYSJ BTB/POZ domain containing protein OS=Oryza
sativa subsp. japonica GN=LOC_Os11g24550 PE=4 SV=1
Length = 374

Score = 38.9 bits (89), Expect = 0.18
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CEDA+ +++ S L A K G +VL AA LDF+S
Sbjct: 298 LQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFLS 339


>tr|A3CAX7|A3CAX7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032449 PE=4 SV=1
Length = 334

Score = 38.9 bits (89), Expect = 0.18
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CEDA+ +++ S L A K G +VL AA LDF+S
Sbjct: 258 LQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFLS 299


>tr|A2ZDV3|A2ZDV3_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35967 PE=4 SV=1
Length = 374

Score = 38.9 bits (89), Expect = 0.18
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVS 410
L+++CEDA+ +++ S L A K G +VL AA LDF+S
Sbjct: 298 LQLMCEDALCRSLSVLTVASTLVFAEKHGCRVLKAACLDFLS 339


>tr|A0D9R2|A0D9R2_PARTE Chromosome undetermined scaffold_42, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00014710001 PE=4 SV=1
Length = 537

Score = 38.1 bits (87), Expect = 0.31
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356
L+ +CED + KNI N I ++ LA KF +Q L A + F+ + + + ++ + +K+
Sbjct: 468 LKNLCEDHLIKNISLKNVIEVVNLADKFSAQELKANAMIFLLDNKQKILNTQDINMLSKE 527


>tr|A0C020|A0C020_PARTE Chromosome undetermined scaffold_14, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00005990001 PE=4 SV=1
Length = 529

Score = 38.1 bits (87), Expect = 0.31
Identities = 18/60 (30%), Positives = 34/60 (56%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356
L+ +CED + KNI N I ++ LA KF +Q L A + F+ + + + ++ + +K+
Sbjct: 460 LKNLCEDHLIKNISLKNVIDVVNLADKFSAQELKANAMIFLLDNKQKILNTQDINMLSKE 519


>tr|B8LMS2|B8LMS2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 390

Score = 37.7 bits (86), Expect = 0.40
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356
LR +CE I++ I ILELA+++ + L +A L F + ++E + E ++ +
Sbjct: 313 LRWLCESRISQGITVSTVAKILELAQRYQASQLKSACLKFAASNLEEVMKSEGFEYLKEN 372

Query: 355 DPS 347
PS
Sbjct: 373 CPS 375


>tr|Q3UTC4|Q3UTC4_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=ENSMUSG00000074424 PE=2 SV=1
Length = 357

Score = 37.4 bits (85), Expect = 0.52
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -2

Query: 535 LRIVCEDAIAKNIGAHNAISILELARKFGSQVLHAAVLDFVSQDIEHLFLLEEYQIYAKK 356
L ++CEDA+++N+ NA L LA +Q L LDF++ + E++ +
Sbjct: 275 LMVLCEDALSRNLSVENAAHTLILADLHSTQQLKTQALDFIALHASKVCETSEWKSMVES 334

Query: 355 DP 350
+P
Sbjct: 335 NP 336