BP913490
Clone id YMU001_000030_G10
Library
Length 460
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATTCGCGGCCGCGAATGCCGCATCTATGTTCTTGATGTAAACAACGATCCGGGTTTGCCT
GGCATGGCTTTGGTGCATAGTCACCCACATGTTCATCAACCTGGGCAGAAAGCAGAAAGA
CTGTGTCATGCCTAGCTAGAGCTAATGGATTGGGAGAGTTGGAACCATTAAGTCTTATAT
ATGGATGGGGCAGTCAGAAAAATAACAATCACACAGCCGCATATTGTCATGCCTTACTTA
CCCAGCAATCGGCTGCACCAGTTGAGGATGGAGCTCGTCATCCCTCAGATCTTCGATGGC
TTCCAAGGTAGATGCTATCCCATGATTGCATACCAGGATGAGGGAATGTAATCTCTTAAC
CTCATCACGGGTCTTGTCAATGTCTGCTGCATCCTCCCCTCTCATCTCCTGCCGTCTCAA
CAAGCTGCATTTCTTGTGTTGCTCAGCACGCAGAGCCTCC
■■Homology search results ■■ -
sp_hit_id Q7V215
Definition sp|Q7V215|ISPG_PROMP 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1378 / MED4)
Align length 72
Score (bit) 31.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913490|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G10.
(444 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7V215|ISPG_PROMP 4-hydroxy-3-methylbut-2-en-1-yl diphosphate... 32 1.5
sp|Q9PJW4|UBIE_CHLMU Menaquinone biosynthesis methyltransferase ... 30 4.5
sp|Q250M5|RL16_DESHY 50S ribosomal protein L16 OS=Desulfitobacte... 30 5.9
sp|A2QRG2|END3_ASPNC Actin cytoskeleton-regulatory complex prote... 30 5.9
sp|Q7MMN0|ZNUC_VIBVY Zinc import ATP-binding protein znuC OS=Vib... 30 6.0
sp|Q8DFQ4|ZNUC_VIBVU Zinc import ATP-binding protein znuC OS=Vib... 30 6.0
sp|Q8BLI4|DSE_MOUSE Dermatan-sulfate epimerase OS=Mus musculus G... 29 7.7
sp|Q9UL01|DSE_HUMAN Dermatan-sulfate epimerase OS=Homo sapiens G... 29 7.7
sp|P0C2H4|DSE_BOVIN Dermatan-sulfate epimerase OS=Bos taurus GN=... 29 7.7
sp|Q61180|SCNNA_MOUSE Amiloride-sensitive sodium channel subunit... 29 7.8
sp|Q9NQ36|SCUB2_HUMAN Signal peptide, CUB and EGF-like domain-co... 29 10.0

>sp|Q7V215|ISPG_PROMP 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1378 / MED4) GN=ispG PE=3 SV=1
Length = 405

Score = 31.6 bits (70), Expect = 1.5
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = -2

Query: 404 LRRQEMRGEDAADIDKTRDEVKRLHSL---ILVCNHGIASTLEAIEDLRDDELHPQLVQP 234
+R Q M ED D+D + +KRLH + I+ + +A+ D+++ + + P
Sbjct: 41 VRVQSMINEDTMDVDNSYLAIKRLHEVGCEIVRLTVPSLAHAKAVGDIKEKLIKNNIDTP 100

Query: 233 IAG*VRHDNMRL 198
+ V H+ M++
Sbjct: 101 LVADVHHNGMKI 112


>sp|Q9PJW4|UBIE_CHLMU Menaquinone biosynthesis methyltransferase
ubiE OS=Chlamydia muridarum GN=ubiE PE=3 SV=2
Length = 229

Score = 30.0 bits (66), Expect = 4.5
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +3

Query: 150 H*VLYMDGAVRKITITQPHIVMPYLPSNRLHQLRMELVIPQIFDGFQGRCYPMIAYQDEG 329
H VL G + + +T+P Y P + LH+L + LV+P + + G Y +Y E
Sbjct: 135 HRVLKPKGRLGILELTRP---ATYNPVHLLHKLYLNLVVPSVGRFYSGNSY-AYSYLKES 190

Query: 330 M*SLNLITGLVNVCCILPSHLLPSQQAAF 416
+ +L T L V H++ ++ F
Sbjct: 191 IRNLPCDTSLERVFHKSGLHIIRKRKLLF 219


>sp|Q250M5|RL16_DESHY 50S ribosomal protein L16
OS=Desulfitobacterium hafniense (strain Y51) GN=rplP
PE=3 SV=1
Length = 145

Score = 29.6 bits (65), Expect = 5.9
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = -2

Query: 443 EALRAEQHK---KCSLLRRQEMRGEDA 372
EALR HK KC ++RR+E+ G DA
Sbjct: 116 EALRLAMHKLPVKCKIVRREELEGGDA 142


>sp|A2QRG2|END3_ASPNC Actin cytoskeleton-regulatory complex protein
end3 OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=end3 PE=3 SV=1
Length = 404

Score = 29.6 bits (65), Expect = 5.9
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -2

Query: 443 EALRAEQHKKCSL--LRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDL 270
EAL+ ++K+ L LR R +D ++++ RD+VK + + +A E + DL
Sbjct: 334 EALQLLEYKERELRELREGAGRSKDGQNVERLRDDVKTVGEQVEGLKSHLAQRKEVLSDL 393

Query: 269 R 267
R
Sbjct: 394 R 394


>sp|Q7MMN0|ZNUC_VIBVY Zinc import ATP-binding protein znuC OS=Vibrio
vulnificus (strain YJ016) GN=znuC PE=3 SV=1
Length = 261

Score = 29.6 bits (65), Expect = 6.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1

Query: 171 HP-YIRLNGSNSPNPLALARHDTVFLLSAQVDEHVGDYAPKPCQANPDRCLHQEH 10
HP YI L GS + + LA+ H Q D H D A +P + +C H H
Sbjct: 210 HPSYIALFGSAARDSLAIYHH--------QHDHHHHDLAGQPVSGDATQCNHHHH 256


>sp|Q8DFQ4|ZNUC_VIBVU Zinc import ATP-binding protein znuC OS=Vibrio
vulnificus GN=znuC PE=3 SV=1
Length = 261

Score = 29.6 bits (65), Expect = 6.0
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1

Query: 171 HP-YIRLNGSNSPNPLALARHDTVFLLSAQVDEHVGDYAPKPCQANPDRCLHQEH 10
HP YI L GS + + LA+ H Q D H D A +P + +C H H
Sbjct: 210 HPSYIALFGSAARDSLAIYHH--------QHDHHHHDLAGQPVSGDATQCNHHHH 256


>sp|Q8BLI4|DSE_MOUSE Dermatan-sulfate epimerase OS=Mus musculus
GN=Dse PE=2 SV=1
Length = 958

Score = 29.3 bits (64), Expect = 7.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2

Query: 125 ANGLGELEPLSLIYGWGSQKNNNHTAAYCHALLT 226
AN G + S GWG Q +NH C ALLT
Sbjct: 182 ANASGYMYETSYRRGWGFQYLHNHQPTNCMALLT 215


>sp|Q9UL01|DSE_HUMAN Dermatan-sulfate epimerase OS=Homo sapiens
GN=DSE PE=1 SV=1
Length = 958

Score = 29.3 bits (64), Expect = 7.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2

Query: 125 ANGLGELEPLSLIYGWGSQKNNNHTAAYCHALLT 226
AN G + S GWG Q +NH C ALLT
Sbjct: 182 ANASGYMYETSYRRGWGFQYLHNHQPTNCMALLT 215


>sp|P0C2H4|DSE_BOVIN Dermatan-sulfate epimerase OS=Bos taurus GN=DSE
PE=1 SV=1
Length = 958

Score = 29.3 bits (64), Expect = 7.7
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2

Query: 125 ANGLGELEPLSLIYGWGSQKNNNHTAAYCHALLT 226
AN G + S GWG Q +NH C ALLT
Sbjct: 182 ANASGYMYETSYRRGWGFQYLHNHQPTNCMALLT 215


>sp|Q61180|SCNNA_MOUSE Amiloride-sensitive sodium channel subunit
alpha OS=Mus musculus GN=Scnn1a PE=1 SV=2
Length = 699

Score = 29.3 bits (64), Expect = 7.8
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -1

Query: 177 LPHPYIRLNGSNSPNPLALAR--HDTVFLLSAQVDEHVGDYAPKPCQANPDRCLHQEHRC 4
LPHP RL PNP AR +V + QVD + C N C +Q +
Sbjct: 211 LPHPLQRLRTPPPPNPARSARSASSSVRDNNPQVDRKDWKIGFQLCNQNKSDCFYQTYSS 270

Query: 3 G 1
G
Sbjct: 271 G 271


tr_hit_id A7QLC3
Definition tr|A7QLC3|A7QLC3_VITVI Chromosome chr11 scaffold_118, whole genome shotgun sequence OS=Vitis vinifera
Align length 76
Score (bit) 67.0
E-value 4.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913490|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G10.
(444 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QLC3|A7QLC3_VITVI Chromosome chr11 scaffold_118, whole geno... 67 4e-10
tr|A5B6D5|A5B6D5_VITVI Putative uncharacterized protein OS=Vitis... 67 4e-10
tr|Q9SZW6|Q9SZW6_ARATH Putative uncharacterized protein AT4g3013... 66 1e-09
tr|A7PG46|A7PG46_VITVI Chromosome chr6 scaffold_15, whole genome... 66 1e-09
tr|B8B030|B8B030_ORYSI Putative uncharacterized protein OS=Oryza... 64 3e-09
tr|B4FLB3|B4FLB3_MAIZE Putative uncharacterized protein OS=Zea m... 64 3e-09
tr|A3B1Y5|A3B1Y5_ORYSJ Putative uncharacterized protein OS=Oryza... 64 3e-09
tr|Q9ZVD1|Q9ZVD1_ARATH Putative uncharacterized protein At2g2709... 63 6e-09
tr|Q5XV54|Q5XV54_ARATH Putative uncharacterized protein OS=Arabi... 63 6e-09
tr|O65666|O65666_ARATH Putative uncharacterized protein AT4g3979... 63 6e-09
tr|Q9LY33|Q9LY33_ARATH BZIP protein OS=Arabidopsis thaliana GN=F... 63 8e-09
tr|Q93YU8|Q93YU8_ARATH Putative bZIP protein OS=Arabidopsis thal... 63 8e-09
tr|Q56XC8|Q56XC8_ARATH BZIP like protein OS=Arabidopsis thaliana... 63 8e-09
tr|Q38816|Q38816_ARATH BZIP protein OS=Arabidopsis thaliana PE=2... 63 8e-09
tr|O64472|O64472_ARATH Putative uncharacterized protein At2g1909... 62 1e-08
tr|Q65XR1|Q65XR1_ORYSJ cDNA, clone: J065052C17, full insert sequ... 62 1e-08
tr|Q0DKD0|Q0DKD0_ORYSJ Os05g0172300 protein OS=Oryza sativa subs... 62 1e-08
tr|B8AYL6|B8AYL6_ORYSI Putative uncharacterized protein OS=Oryza... 62 1e-08
tr|A9RKX2|A9RKX2_PHYPA Predicted protein OS=Physcomitrella paten... 62 1e-08
tr|A7PKB0|A7PKB0_VITVI Chromosome chr15 scaffold_19, whole genom... 62 1e-08
tr|A5BR55|A5BR55_VITVI Putative uncharacterized protein OS=Vitis... 62 1e-08
tr|A3B0G0|A3B0G0_ORYSJ Putative uncharacterized protein OS=Oryza... 62 1e-08
tr|A7R5F9|A7R5F9_VITVI Chromosome undetermined scaffold_957, who... 62 2e-08
tr|B8A2W2|B8A2W2_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08
tr|A9S735|A9S735_PHYPA Predicted protein OS=Physcomitrella paten... 61 2e-08
tr|B2Y4P0|B2Y4P0_ARAHA Putative uncharacterized protein OS=Arabi... 61 3e-08
tr|Q0GPH0|Q0GPH0_SOYBN BZIP transcription factor bZIP80 (Fragmen... 60 4e-08
tr|B7ZXF8|B7ZXF8_MAIZE Putative uncharacterized protein OS=Zea m... 60 4e-08
tr|Q56W45|Q56W45_ARATH BZIP-like protein OS=Arabidopsis thaliana... 60 5e-08
tr|A7P8E4|A7P8E4_VITVI Chromosome chr3 scaffold_8, whole genome ... 60 7e-08

>tr|A7QLC3|A7QLC3_VITVI Chromosome chr11 scaffold_118, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001534001
PE=4 SV=1
Length = 697

Score = 67.0 bits (162), Expect = 4e-10
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R +KC+ LR Q++RG+D + +DKTR ++ LH+ I V H + + + IE LRD
Sbjct: 405 EKIRIAYERKCNRLRNQDVRGDDPSSVDKTRAGIRDLHTQIKVSIHSVEAVSKRIEALRD 464

Query: 263 DELHPQLVQPIAG*VR 216
+EL PQL++ + G R
Sbjct: 465 EELQPQLLELVQGLAR 480


>tr|A5B6D5|A5B6D5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_004545 PE=4 SV=1
Length = 769

Score = 67.0 bits (162), Expect = 4e-10
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R +KC+ LR Q++RG+D + +DKTR ++ LH+ I V H + + + IE LRD
Sbjct: 459 EKIRIAYERKCNRLRNQDVRGDDPSSVDKTRAGIRDLHTQIKVSIHSVEAVSKRIEALRD 518

Query: 263 DELHPQLVQPIAG*VR 216
+EL PQL++ + G R
Sbjct: 519 EELQPQLLELVQGLAR 534


>tr|Q9SZW6|Q9SZW6_ARATH Putative uncharacterized protein AT4g30130
OS=Arabidopsis thaliana GN=F6G3.160 PE=2 SV=1
Length = 725

Score = 65.9 bits (159), Expect = 1e-09
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
+ +R KKC +LR Q+++G D++ +DKTR ++ LH+ I V H I S E IE LRD
Sbjct: 421 DRIRIAYEKKCLVLRNQDVKGADSSAVDKTRATIRDLHTQIKVSIHSIESISERIETLRD 480

Query: 263 DELHPQLVQPIAG 225
EL PQL++ + G
Sbjct: 481 QELLPQLLELVQG 493


>tr|A7PG46|A7PG46_VITVI Chromosome chr6 scaffold_15, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017371001
PE=4 SV=1
Length = 765

Score = 65.9 bits (159), Expect = 1e-09
Identities = 36/73 (49%), Positives = 45/73 (61%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R + KC +LR+ E +GE IDKTR VK LHS I V H I S + IE+LRD
Sbjct: 468 EMIRRDYDMKCKILRQLESKGESTNKIDKTRAVVKDLHSRIRVAIHRINSISKRIEELRD 527

Query: 263 DELHPQLVQPIAG 225
EL PQL + I+G
Sbjct: 528 TELEPQLEELISG 540


>tr|B8B030|B8B030_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_19204 PE=4 SV=1
Length = 515

Score = 64.3 bits (155), Expect = 3e-09
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R +KC+LLRRQ RG +A IDKTR VK LHS + V + + + IE +RD
Sbjct: 215 EHVRKTYDEKCNLLRRQFARGLNAQLIDKTRAVVKDLHSRVSVAIQAVDAISKRIEKIRD 274

Query: 263 DELHPQLVQPIAG*VR 216
+EL PQLV+ I G +R
Sbjct: 275 EELQPQLVELIQGLIR 290


>tr|B4FLB3|B4FLB3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 348

Score = 64.3 bits (155), Expect = 3e-09
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R +KC+LLRRQ RG +A IDKTR VK LHS + V + + + IE +RD
Sbjct: 49 ENVRKAYDEKCNLLRRQFARGLNAQVIDKTRAVVKDLHSRVSVVIQAVDAISKRIEKIRD 108

Query: 263 DELHPQLVQPIAG*VR 216
+EL PQLV+ I G +R
Sbjct: 109 EELQPQLVELIQGLIR 124


>tr|A3B1Y5|A3B1Y5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_017057 PE=4 SV=1
Length = 722

Score = 64.3 bits (155), Expect = 3e-09
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R +KC+LLRRQ RG +A IDKTR VK LHS + V + + + IE +RD
Sbjct: 422 EHVRKTYDEKCNLLRRQFARGLNAQLIDKTRAVVKDLHSRVSVAIQAVDAISKRIEKIRD 481

Query: 263 DELHPQLVQPIAG*VR 216
+EL PQLV+ I G +R
Sbjct: 482 EELQPQLVELIQGLIR 497


>tr|Q9ZVD1|Q9ZVD1_ARATH Putative uncharacterized protein At2g27090
(At2g27090) OS=Arabidopsis thaliana GN=At2g27090 PE=1
SV=1
Length = 743

Score = 63.2 bits (152), Expect = 6e-09
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
+ +R E +KC +LR E G+ + IDKTR VK LHS I V H I S IE+LRD
Sbjct: 448 QTVRREYDEKCRILRELESEGKGSQRIDKTRAVVKDLHSRIRVAIHRIDSISRRIEELRD 507

Query: 263 DELHPQLVQPIAG 225
+EL PQL + I G
Sbjct: 508 NELQPQLEELIEG 520


>tr|Q5XV54|Q5XV54_ARATH Putative uncharacterized protein
OS=Arabidopsis thaliana GN=At4g39790 PE=2 SV=1
Length = 657

Score = 63.2 bits (152), Expect = 6e-09
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R E +KC LR Q + A +DKTR K LHS I V + S + IE +RD
Sbjct: 395 EMIRKEYDRKCEQLRNQFAKDHSAKSMDKTRAAAKDLHSRIRVAIQSVESISKRIERIRD 454

Query: 263 DELHPQLVQPIAG*VR 216
DELHPQL++ + G +R
Sbjct: 455 DELHPQLLEFLQGLIR 470


>tr|O65666|O65666_ARATH Putative uncharacterized protein AT4g39790
OS=Arabidopsis thaliana GN=AT4g39790 PE=2 SV=1
Length = 631

Score = 63.2 bits (152), Expect = 6e-09
Identities = 33/76 (43%), Positives = 44/76 (57%)
Frame = -2

Query: 443 EALRAEQHKKCSLLRRQEMRGEDAADIDKTRDEVKRLHSLILVCNHGIASTLEAIEDLRD 264
E +R E +KC LR Q + A +DKTR K LHS I V + S + IE +RD
Sbjct: 369 EMIRKEYDRKCEQLRNQFAKDHSAKSMDKTRAAAKDLHSRIRVAIQSVESISKRIERIRD 428

Query: 263 DELHPQLVQPIAG*VR 216
DELHPQL++ + G +R
Sbjct: 429 DELHPQLLEFLQGLIR 444