BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913492|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G12.
         (346 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P21877|ACSA1_ACEXY Cellulose synthase 1 OS=Acetobacter xylinu...    32   0.98 
sp|O31428|SKFF_BACSU Putative bacteriocin-skfA transport system ...    30   2.9  
sp|O82860|BCSB2_ACEXY Cyclic di-GMP-binding protein OS=Acetobact...    29   6.3  
sp|Q08AD1|CA1L1_HUMAN Calmodulin-regulated spectrin-associated p...    29   8.3  
sp|P37716|BCSB1_ACEXY Cyclic di-GMP-binding protein OS=Acetobact...    29   8.3  

>sp|P21877|ACSA1_ACEXY Cellulose synthase 1 OS=Acetobacter xylinus
            GN=acsAB PE=1 SV=3
          Length = 1550

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 289  PETSSVTMRIEEEWLNQPAPVPIEPIFQAPT-NTTPVYFIA 170
            PET+SVTM + E+++    P P  P F   +    P++F++
Sbjct: 885  PETNSVTMTLNEQYIGTLRPDPAHPTFGPMSFEINPIFFVS 925


>sp|O31428|SKFF_BACSU Putative bacteriocin-skfA transport system
           permease protein skfF OS=Bacillus subtilis GN=skfF PE=2
           SV=1
          Length = 448

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +3

Query: 30  VSTLASALSTICFYRSFFQWSSAPQL*QFSLFGLGIGLTIGDLAPWFAIK*TGVVLV 200
           V  L   + +IC YR FF   S+      + F  G+GL    L+P + +   G++ V
Sbjct: 146 VFLLMLGIYSICLYRFFFLQHSSGIWESIARFISGVGLVFDTLSPLYVVVFIGIITV 202


>sp|O82860|BCSB2_ACEXY Cyclic di-GMP-binding protein OS=Acetobacter
           xylinus GN=bcsB PE=3 SV=1
          Length = 802

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -1

Query: 289 PETSSVTMRIEEEWLNQPAPVPIEPIF-QAPTNTTPVYFIA 170
           P+TS+VT+ + E+++    P P  P F     +  P++FI+
Sbjct: 141 PDTSAVTITLNEQFIGTLRPDPTHPTFGPLSFDINPIFFIS 181


>sp|Q08AD1|CA1L1_HUMAN Calmodulin-regulated spectrin-associated
            protein 1-like protein 1 OS=Homo sapiens GN=CAMSAP1L1
            PE=1 SV=2
          Length = 1489

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -1

Query: 319  EQVLVRITPYPETSSVTMRIEEEWLNQPAPVPIEPIF--QAPTN 194
            E  +  +   P T +V +   E+ LNQP   P +P+F   AP N
Sbjct: 1077 ESTVSEVLSLPVTETVCLTPNEDQLNQPTEPPPKPVFPPTAPKN 1120


>sp|P37716|BCSB1_ACEXY Cyclic di-GMP-binding protein OS=Acetobacter
           xylinus GN=bcsB PE=1 SV=1
          Length = 802

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 289 PETSSVTMRIEEEWLNQPAPVPIEPIF-QAPTNTTPVYFI 173
           P+TS+VT+ + E+++    P P  P F     +  P++FI
Sbjct: 142 PDTSAVTITLNEQFIGTLRPDPTHPTFGPLSFDINPIFFI 181

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913492|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_G12.
         (346 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3DYL0|B3DYL0_METI4 SAM-dependent methyltransferase OS=Methyl...    36   1.1  

>tr|B3DYL0|B3DYL0_METI4 SAM-dependent methyltransferase
           OS=Methylacidiphilum infernorum (isolate V4) GN=smtA
           PE=4 SV=1
          Length = 337

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 15/41 (36%), Positives = 27/41 (65%)
 Frame = -2

Query: 258 KKSGLTNRLQSLSSRFFKHPLIQHLFILLQTRGQDHLWSSQ 136
           +  GL +R+Q +++ FF++PL Q + +   +R   HLWSS+
Sbjct: 209 RAGGLKDRVQFVAADFFEYPLPQQVSLFTFSRSLHHLWSSR 249