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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913503
Clone id YMU001_000030_H11
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000030_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGTAAAAGGTCACTATGGACACGCCCAATGCACTGGAGGAGGTGACGCAGGGTAGAGACA
ATACTATCACAAATATAGTCCTAGTCACGAACATGACAACCCACAAACGGAAGTGCTGAG
AGTGTAAGGCTATTAGCGGGATTTTCTTCACAGGAACTGTACATATGCCACATAATACTT
CCCCAGTCTTGGGAGGAGTGGCAAATATATACAGACACGAGAGGACTTCATACGCATTGC
TATTATGCTACTTTGTATCAGGGTTAAGTTCGCAACAATGGGAGGAGGAGATACACAAGA
GGATGGCTCTAGACAAGAGAGGGAGGAGGGGGGAGATACACACCTCGGAGAGGTTTGTCT
CGTGGAGGGCTTCAATTAATAGACAGATACAAAGAAGTGTCAAACATATAATTTTGAGTC
TCAGATGCTACACCTCTTGGATGA
■■Homology search results ■■ -
sp_hit_id A0MGZ7
Definition sp|A0MGZ7|H6ST3_DANRE Heparan-sulfate 6-O-sulfotransferase 3 OS=Danio rerio
Align length 40
Score (bit) 30.8
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913503|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_H11.
         (444 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0MGZ7|H6ST3_DANRE Heparan-sulfate 6-O-sulfotransferase 3 OS=...    31   2.6  
sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=2       30   5.9  
sp|Q8ZLB8|BCSC_SALTY Cellulose synthase operon protein C OS=Salm...    29   7.7  
sp|O43001|SYJ1_SCHPO Inositol-1,4,5-trisphosphate 5-phosphatase ...    29   10.0 

>sp|A0MGZ7|H6ST3_DANRE Heparan-sulfate 6-O-sulfotransferase 3
           OS=Danio rerio GN=hs6st3 PE=2 SV=1
          Length = 419

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = -2

Query: 203 CHSSQDWGSIMWHMYSSCEENPANS---LTLSALPFVGCH 93
           C++  DW  +  H +  C  N AN+     L+ L  VGC+
Sbjct: 230 CYNGDDWSGVTLHDFMDCPSNLANNRQVRMLADLSLVGCY 269


>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=2
          Length = 4372

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 195  GVANIYRHERTSYALLLCYFVSGLSSQQWEE 287
            GV+N Y+ + T    LLC    G S  QWE+
Sbjct: 1224 GVSNGYKGDTTPNLRLLCSITGGTSPAQWED 1254


>sp|Q8ZLB8|BCSC_SALTY Cellulose synthase operon protein C
           OS=Salmonella typhimurium GN=bcsC PE=3 SV=2
          Length = 1143

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
 Frame = +3

Query: 57  DNTITNIVLVTNMTTHKRKC*ECKAISGIFFTGTVHMPHNTSPVLGGVANIYRHERTSYA 236
           DNT +  VL        RK     A +  ++  T+ M    +  + G+AN+YR +    A
Sbjct: 367 DNTDSYAVLGLGDVAMARKD---NAAAERYYQQTLRMDSGNTNAVRGLANLYRQQSPQKA 423

Query: 237 LLLCYFVSGLSSQQWE--EEIHKRMALDKRGRRGEIHTSERFVSWRASINRQ 386
                F++ LS+ Q    ++I + +  D+  ++ E   SE   +  A ++R+
Sbjct: 424 ---AAFIASLSASQRRSIDDIERSLENDRLAQQAETLESEGKWAQAAELHRR 472


>sp|O43001|SYJ1_SCHPO Inositol-1,4,5-trisphosphate 5-phosphatase 1
           OS=Schizosaccharomyces pombe GN=syj1 PE=1 SV=1
          Length = 1076

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/74 (20%), Positives = 33/74 (44%)
 Frame = +3

Query: 192 GGVANIYRHERTSYALLLCYFVSGLSSQQWEEEIHKRMALDKRGRRGEIHTSERFVSWRA 371
           G VA  + +E T    +  +  +G ++    +  ++ +A   R RRG    +  +V W  
Sbjct: 680 GAVAIRFDYEDTGLCFITSHLAAGYTNYDERDHDYRTIASGLRFRRGRSIFNHDYVVWFG 739

Query: 372 SINRQIQRSVKHII 413
             N +I  + + ++
Sbjct: 740 DFNYRISLTYEEVV 753
tr_hit_id Q1Q041
Definition tr|Q1Q041|Q1Q041_9BACT Putative uncharacterized protein OS=Candidatus Kuenenia stuttgartiensis
Align length 54
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913503|Adiantum capillus-veneris mRNA, clone:
YMU001_000030_H11.
         (444 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1Q041|Q1Q041_9BACT Putative uncharacterized protein OS=Candi...    35   1.4  
tr|Q2WGL5|Q2WGL5_ASPOR Saponin hydrolase OS=Aspergillus oryzae G...    35   2.4  
tr|Q2UTY5|Q2UTY5_ASPOR Predicted protein OS=Aspergillus oryzae G...    35   2.4  
tr|B8NSK3|B8NSK3_ASPFL Putative uncharacterized protein OS=Asper...    35   2.4  
tr|B1YJJ6|B1YJJ6_EXIS2 Putative uncharacterized protein OS=Exigu...    33   9.2  
tr|A1VKW7|A1VKW7_POLNA Sensor protein OS=Polaromonas naphthaleni...    33   9.2  
tr|Q6FIJ9|Q6FIJ9_CANGA Similar to uniprot|Q04952 Saccharomyces c...    33   9.2  

>tr|Q1Q041|Q1Q041_9BACT Putative uncharacterized protein
           OS=Candidatus Kuenenia stuttgartiensis GN=kustd1962 PE=4
           SV=1
          Length = 1158

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = -3

Query: 187 TGEVLCGICTVPVKKIPLIALHSQHFRLWVVMFVTRTIFVIVLSLPCVTSSSAL 26
           TG +L  + T PVK    I +      L+  +FVTRTI+ +++ L  V S S L
Sbjct: 447 TGVILASVGTGPVKGFAWILIIGLIINLFTAIFVTRTIYELLMDLKWVKSFSML 500


>tr|Q2WGL5|Q2WGL5_ASPOR Saponin hydrolase OS=Aspergillus oryzae
           GN=sda1 PE=3 SV=1
          Length = 633

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
 Frame = +1

Query: 193 EEWQIYTDTRGLHTHCYYA-------------TLYQG*VRNNGRRRYTRGWL*TREGGGG 333
           ++WQ+  DTRG     + A             T      RNNG RR+ R WL   +G  G
Sbjct: 341 DKWQVILDTRGTGRQMFMAGMRGIPPIIDLIATTVASSTRNNGPRRFFRPWLLDHDGDRG 400

Query: 334 RY 339
            Y
Sbjct: 401 DY 402


>tr|Q2UTY5|Q2UTY5_ASPOR Predicted protein OS=Aspergillus oryzae
           GN=AO090009000539 PE=4 SV=1
          Length = 643

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
 Frame = +1

Query: 193 EEWQIYTDTRGLHTHCYYA-------------TLYQG*VRNNGRRRYTRGWL*TREGGGG 333
           ++WQ+  DTRG     + A             T      RNNG RR+ R WL   +G  G
Sbjct: 341 DKWQVILDTRGTGRQMFMAGMRGIPPIIDLIATTVASSTRNNGPRRFFRPWLLDHDGDRG 400

Query: 334 RY 339
            Y
Sbjct: 401 DY 402


>tr|B8NSK3|B8NSK3_ASPFL Putative uncharacterized protein
           OS=Aspergillus flavus NRRL3357 GN=AFLA_049540 PE=4 SV=1
          Length = 606

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
 Frame = +1

Query: 193 EEWQIYTDTRGLHTHCYYA-------------TLYQG*VRNNGRRRYTRGWL*TREGGGG 333
           ++WQ+  DTRG     + A             T      RNNG RR+ R WL   +G  G
Sbjct: 314 DKWQVILDTRGTGRQMFMAGMRGIPPIIDLIATTVASSTRNNGPRRFFRPWLLDHDGDRG 373

Query: 334 RY 339
            Y
Sbjct: 374 DY 375


>tr|B1YJJ6|B1YJJ6_EXIS2 Putative uncharacterized protein
           OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM
           13490 / 255-15) GN=Exig_0545 PE=3 SV=1
          Length = 214

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
 Frame = +3

Query: 6   KVTMDTPNALEEVTQGRDNTITNIV----LVTNMTT-HKRKC*ECKAISGIFFTGTVHMP 170
           + T  T   LE+++Q +D    ++     L T MT  +KR C     ++ +    T+ + 
Sbjct: 139 QTTQTTQTILEDLSQIKDKLYRDLEQKLELTTEMTAEYKRMCFSLSILAFLLIATTIILF 198

Query: 171 HNTSPVLGGVANIYR 215
           H + P+L    N YR
Sbjct: 199 HRSKPILENKTNTYR 213


>tr|A1VKW7|A1VKW7_POLNA Sensor protein OS=Polaromonas
           naphthalenivorans (strain CJ2) GN=Pnap_0978 PE=4 SV=1
          Length = 1175

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = -3

Query: 208 IFATPPKTGEVLCGICTVP-----VKKIPLIALHSQHFRLWVVMFVTRTIFVIVLS 56
           +F  PPK G ++C +  +P     V  I  + + +Q   LW+VM V   ++V +L+
Sbjct: 175 VFGIPPKWGYLICALVVIPLVTHGVSTISRLQVWTQ--ALWLVMLVVPFVYVFMLA 228


>tr|Q6FIJ9|Q6FIJ9_CANGA Similar to uniprot|Q04952 Saccharomyces
            cerevisiae YMR306w FKS3 OS=Candida glabrata
            GN=CAGL0M13827g PE=4 SV=1
          Length = 1840

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 20/83 (24%), Positives = 39/83 (46%)
 Frame = +3

Query: 150  TGTVHMPHNTSPVLGGVANIYRHERTSYALLLCYFVSGLSSQQWEEEIHKRMALDKRGRR 329
            T TV +PH T  +L G+  I R E  S  + +  ++  L  ++W+  +     L    + 
Sbjct: 785  TFTVLIPHYTEKILLGLREIIREESQSSKITVLEYLKYLHPEEWDCFVKDTKILSAEKKA 844

Query: 330  GEIHTSERFVSWRASINRQIQRS 398
             + HT +   S    +N++ Q++
Sbjct: 845  DQYHTVDE--SSNTILNKKEQQN 865