BP913507
Clone id YMU001_000031_A04
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTGTTTTTTACGCGCGTGATAAGCATACTCTTTTTAATCTTGGTTCTTGCAGA
GGCCATGTGAGCCTCCTCTGACAAAACAATCATCAAGGTCTCTCTCTCTCTCTCTCTGTC
TCAACCATAGTTGTAGTACATATAGGACAGCATTGCTTTCCCCTTCCGTGAAATTACCTT
CGATGCGTTTCTGCAGCTTAATATGAGTGTTATAAGATACGCCTCATTTTAAGCCATTGC
TCAATGCAATCTTTGCACTCCGTCTGTCATTTCAAACCTATATTATTCAAGATGATGATT
CTTCGCACTTCAACGCTGCCTCGAGAATCTTCATACAAGGGCACTAACTGCTCTTTCAAT
GCCCATTGAAATGTCTTGCGACTGCAGCCAACCAGCATTAAGTGTCTCATGGAAGAACAG
CTCGCATGGTGTCATGTTAGCAACTAAGATGA
■■Homology search results ■■ -
sp_hit_id A5PK40
Definition sp|A5PK40|CTL3_BOVIN Choline transporter-like protein 3 OS=Bos taurus
Align length 43
Score (bit) 30.4
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913507|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_A04.
(436 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A5PK40|CTL3_BOVIN Choline transporter-like protein 3 OS=Bos t... 30 3.4

>sp|A5PK40|CTL3_BOVIN Choline transporter-like protein 3 OS=Bos
taurus GN=SLC44A3 PE=2 SV=1
Length = 649

Score = 30.4 bits (67), Expect = 3.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1

Query: 283 FFALQRCLENLHTRALTALSMPIEMSCDCSQPALSVSWKNSSH 411
F+ L +CL +L+ A T ++ C ++ AL + KNSSH
Sbjct: 481 FWCLDKCLRHLNQNAYTTTAINGTDFCTSAKDALKLLSKNSSH 523


tr_hit_id Q6Z9M8
Definition tr|Q6Z9M8|Q6Z9M8_ORYSJ Putative uncharacterized protein P0474F07.36 (Putative uncharacterized protein OJ1224_G08.4) OS=Oryza sativa subsp. japonica
Align length 67
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913507|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_A04.
(436 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6Z9M8|Q6Z9M8_ORYSJ Putative uncharacterized protein P0474F07... 33 9.2
tr|Q0J6D6|Q0J6D6_ORYSJ Os08g0331900 protein (Fragment) OS=Oryza ... 33 9.2
tr|A3BRZ9|A3BRZ9_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.2

>tr|Q6Z9M8|Q6Z9M8_ORYSJ Putative uncharacterized protein P0474F07.36
(Putative uncharacterized protein OJ1224_G08.4) OS=Oryza
sativa subsp. japonica GN=P0474F07.36 PE=4 SV=1
Length = 1013

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2

Query: 200 DTPHFKPLLNAIFALRLSFQTYIIQDDDSSHFNAASRIFIQGH*LL------FQCPLKCL 361
+ P+F N++ L LSF Q + F +S +F+QG+ +L Q PL CL
Sbjct: 689 EIPNFFQSFNSLKLLNLSFNNLEGQMPEGGIFQNSSEVFVQGNIMLCSSSPMLQLPL-CL 747

Query: 362 ATAANQH 382
A++ ++H
Sbjct: 748 ASSRHRH 754


>tr|Q0J6D6|Q0J6D6_ORYSJ Os08g0331900 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os08g0331900 PE=4 SV=1
Length = 351

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2

Query: 200 DTPHFKPLLNAIFALRLSFQTYIIQDDDSSHFNAASRIFIQGH*LL------FQCPLKCL 361
+ P+F N++ L LSF Q + F +S +F+QG+ +L Q PL CL
Sbjct: 27 EIPNFFQSFNSLKLLNLSFNNLEGQMPEGGIFQNSSEVFVQGNIMLCSSSPMLQLPL-CL 85

Query: 362 ATAANQH 382
A++ ++H
Sbjct: 86 ASSRHRH 92


>tr|A3BRZ9|A3BRZ9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_025821 PE=4 SV=1
Length = 1007

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2

Query: 200 DTPHFKPLLNAIFALRLSFQTYIIQDDDSSHFNAASRIFIQGH*LL------FQCPLKCL 361
+ P+F N++ L LSF Q + F +S +F+QG+ +L Q PL CL
Sbjct: 689 EIPNFFQSFNSLKLLNLSFNNLEGQMPEGGIFQNSSEVFVQGNIMLCSSSPMLQLPL-CL 747

Query: 362 ATAANQH 382
A++ ++H
Sbjct: 748 ASSRHRH 754