BP913508
Clone id YMU001_000031_A05
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACAAGACCGGTACCTGACTCTACCAAATACATAATACACGTCCGTCGTATGTGATGGGGT
GTCCGTGTGCCGTGAGGGTTAACAAAGTGACCCATAAAAATTCCCCAAAAAAACTTCATA
TTGCAGCAACTTTGCTTGGCCACCAACTCCAGCTCTCAAGCCCGATGACCAAACCGTCAC
ATCCAGCTGAAAGTTCGTATTTCCACCTTCAACCCATGCAATCCCCATTGCCTTTTGAAT
TCTTCAAGATTGCCAATCAAGGCCACAAAGACGGGGGAAAAACACCTTCTCACCGTCAAT
TGCACCAAACTTTGATCGATCGTAACTTGGCAACCATGACCTTGTTTTTCTTGGCAACCC
CTACCTTCTAGAACCCTGTTGGGGCCTACTAAACACGAGATGGAACACCTACCAATGCAG
TCAACTTGGCACAAACCCGGCTCTCAACAAACATTCA
■■Homology search results ■■ -
sp_hit_id Q9XQV2
Definition sp|Q9XQV2|PSAB_HETTR Photosystem I P700 chlorophyll a apoprotein A2 OS=Heterocapsa triquetra
Align length 37
Score (bit) 30.0
E-value 4.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913508|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_A05.
(457 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9XQV2|PSAB_HETTR Photosystem I P700 chlorophyll a apoprotein... 30 4.9
sp|A5FP01|SYT_FLAJ1 Threonyl-tRNA synthetase OS=Flavobacterium j... 30 6.4

>sp|Q9XQV2|PSAB_HETTR Photosystem I P700 chlorophyll a apoprotein A2
OS=Heterocapsa triquetra GN=psaB PE=3 SV=1
Length = 776

Score = 30.0 bits (66), Expect = 4.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -3

Query: 269 FVALIGNLEEFKRQWGLHGLKVEIRTFSWM*RFGHRA 159
F +IGN+ + + +G+HG +V ++ F + FGH A
Sbjct: 32 FFQVIGNIHDIESYYGIHGSQVNLQIF--LSHFGHLA 66


>sp|A5FP01|SYT_FLAJ1 Threonyl-tRNA synthetase OS=Flavobacterium
johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
GN=thrS PE=3 SV=1
Length = 648

Score = 29.6 bits (65), Expect = 6.4
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3

Query: 108 KKLHIAATLLGHQLQLSSPMTKPSH-PAESSYFHLQPMQSPLPFEFFKIANQGHKD 272
K+L++ + GH + + +P H PAE F L+PM P E + + +KD
Sbjct: 299 KELYVTS---GHYAKYGADSFQPIHTPAEGEEFLLKPMNCPHHCEIYNVRPWSYKD 351


tr_hit_id B4H0E8
Definition tr|B4H0E8|B4H0E8_DROPE GL14870 OS=Drosophila persimilis
Align length 75
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913508|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_A05.
(457 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4H0E8|B4H0E8_DROPE GL14870 OS=Drosophila persimilis GN=GL148... 33 5.4
tr|Q2JGJ6|Q2JGJ6_FRASC Putative uncharacterized protein OS=Frank... 33 7.1
tr|Q218I2|Q218I2_RHOPB Putative uncharacterized protein OS=Rhodo... 33 7.1
tr|Q0RR05|Q0RR05_FRAAA Putative secreted protein OS=Frankia alni... 33 7.1

>tr|B4H0E8|B4H0E8_DROPE GL14870 OS=Drosophila persimilis GN=GL14870
PE=4 SV=1
Length = 1292

Score = 33.5 bits (75), Expect = 5.4
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +3

Query: 33 NTRPSYVMGCPCAVRVNKVTHKNSPKKLHIAATLLGH-QLQLSSPMTKPSHPAESSYFHL 209
++R S V+ CP R K+ S K+H+ + G LQ+SS T PSHP+ S H+
Sbjct: 849 HSRNSTVVSCP---RCQKLFQNRSNLKIHMLHPISGGASLQVSSRPTSPSHPSVVS--HV 903

Query: 210 QPMQSPLPFEFFKIA 254
S L FF+ A
Sbjct: 904 SQRTSAL---FFRCA 915


>tr|Q2JGJ6|Q2JGJ6_FRASC Putative uncharacterized protein OS=Frankia
sp. (strain CcI3) GN=Francci3_0207 PE=4 SV=1
Length = 376

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2

Query: 225 GIAWVEGGNTNFQLDVTVWSSGLRAGV 145
G+ WV G N NF DVT W++ R V
Sbjct: 88 GLGWVSGANGNFPADVTAWAAWTRRPV 114


>tr|Q218I2|Q218I2_RHOPB Putative uncharacterized protein
OS=Rhodopseudomonas palustris (strain BisB18)
GN=RPC_1642 PE=3 SV=1
Length = 252

Score = 33.1 bits (74), Expect = 7.1
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = -1

Query: 175 GLVIGLESWSWWPSKVAAI*SFFGEFLWVTLLTLTAHGHPITYDGRVLCIW 23
GL E+W W P+ E L T LTLTAHG+ Y GRV W
Sbjct: 147 GLQAAAETW-WQPTP---------ELLLATSLTLTAHGNGNGYGGRVAAGW 187


>tr|Q0RR05|Q0RR05_FRAAA Putative secreted protein OS=Frankia alni
(strain ACN14a) GN=FRAAL1358 PE=4 SV=1
Length = 342

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2

Query: 234 KAMGIAWVEGGNTNFQLDVTVWSSGLRAGVG 142
K G+ WV G N N+ DV WS+ G+G
Sbjct: 51 KPAGVHWVSGTNGNYPADVNAWSTFTGRGIG 81