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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913511
Clone id YMU001_000031_A09
Library
Length 549
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGCCAGGCGACAATGAACCACTGCCTGATGTTGCAAGTCGGATGTTCGAACCTCCTCTA
AGAGCTTGGGCAGTTCCAAAAGAACGCAGTGAGCCACAAGAAGATCCGACAGCGCAAAAA
CCACCTCTCCTTCTAGGTGGGGCTCCACCCAGTAGTTAGCTAGGTGCGTACCTTACAAAG
CTGAACAGCATTATGTTCCTTCGTCAGGTCATCTACTTAAGTTCGTATCTTGAAGACCCA
CAATTTTCGTGAAACGCATGGAGCTCCCCCTTCGGCATGGAAATGGTTTTTTTGAAGCTG
GACTTGTGTGCTTCCATGCAAGCTGTTTTGTTAATATATTGTCTTGTCACTTTCAAATGG
TTACAGCAGCTCTCTTGCTAGGAGGCAATTACTCAGCACAGATGTTGCGCCTGGGTAGTT
GCCATGTTTGCTGCTTTTGGTCTTTTCCATTGGGCTAGCATCGCTACTTGGGAAATTCCT
TGCTACCTTGTACACCTGTCTCGCCATGATTTGTCAAATTATGTTTAGAATCAAAAAAAA
AAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q863G0
Definition sp|Q863G0|COX81_ATEBE Cytochrome c oxidase polypeptide 8H, mitochondrial OS=Ateles belzebuth
Align length 29
Score (bit) 30.8
E-value 4.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913511|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_A09.
         (532 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q863G0|COX81_ATEBE Cytochrome c oxidase polypeptide 8H, mitoc...    31   4.3  
sp|P10175|COX81_BOVIN Cytochrome c oxidase polypeptide 8H, mitoc...    30   7.3  
sp|Q863F8|COX81_EULFU Cytochrome c oxidase polypeptide 8H, mitoc...    30   9.5  

>sp|Q863G0|COX81_ATEBE Cytochrome c oxidase polypeptide 8H,
           mitochondrial OS=Ateles belzebuth GN=COX8H PE=3 SV=1
          Length = 70

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +1

Query: 34  ASRMFEPPLRAWAVPKER--SEPQEDPTA 114
           A R+ + PLR WAVPK    ++P E PT+
Sbjct: 7   ALRLLQAPLRCWAVPKAHVSAKPAETPTS 35


>sp|P10175|COX81_BOVIN Cytochrome c oxidase polypeptide 8H,
           mitochondrial OS=Bos taurus GN=COX8H PE=1 SV=3
          Length = 70

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +1

Query: 40  RMFEPPLRAWAVPKER--SEPQEDPTAQK 120
           R+ + PLR WAVPK    ++P + PT+ K
Sbjct: 9   RLLQAPLRGWAVPKAHITAKPAKTPTSPK 37


>sp|Q863F8|COX81_EULFU Cytochrome c oxidase polypeptide 8H,
           mitochondrial OS=Eulemur fulvus fulvus GN=COX8H PE=3
           SV=1
          Length = 70

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 34  ASRMFEPPLRAWAVPK--ERSEPQEDPTA 114
           A R+ +PPLR W VPK    ++P   PT+
Sbjct: 7   ALRLLQPPLRCWVVPKLHVSAKPARTPTS 35
tr_hit_id A7PNQ5
Definition tr|A7PNQ5|A7PNQ5_VITVI Chromosome chr8 scaffold_23, whole genome shotgun sequence OS=Vitis vinifera
Align length 28
Score (bit) 46.6
E-value 0.0008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913511|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_A09.
         (532 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PNQ5|A7PNQ5_VITVI Chromosome chr8 scaffold_23, whole genome...    47   8e-04
tr|B8A143|B8A143_MAIZE Putative uncharacterized protein OS=Zea m...    44   0.004
tr|B6U627|B6U627_MAIZE Armadillo/beta-catenin-like repeat family...    44   0.004
tr|B6TK50|B6TK50_MAIZE Armadillo/beta-catenin-like repeat family...    44   0.004
tr|Q9SR28|Q9SR28_ARATH F3L24.22 protein OS=Arabidopsis thaliana ...    42   0.020
tr|Q8LDQ1|Q8LDQ1_ARATH Putative uncharacterized protein OS=Arabi...    42   0.020
tr|Q84J81|Q84J81_ARATH Putative uncharacterized protein At3g0935...    42   0.020
tr|B8LQZ3|B8LQZ3_PICSI Putative uncharacterized protein OS=Picea...    42   0.020
tr|A9NXJ2|A9NXJ2_PICSI Putative uncharacterized protein OS=Picea...    42   0.020
tr|A8MQ87|A8MQ87_ARATH Uncharacterized protein At3g09350.2 OS=Ar...    42   0.020
tr|Q852A6|Q852A6_ORYSJ Os03g0822700 protein OS=Oryza sativa subs...    42   0.026
tr|Q10BD2|Q10BD2_ORYSJ cDNA clone:001-037-A06, full insert seque...    42   0.026
tr|A2XNH4|A2XNH4_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.026
tr|Q9M346|Q9M346_ARATH Putative uncharacterized protein F5K20_10...    40   0.098
tr|Q8GZ58|Q8GZ58_ARATH Putative uncharacterized protein At3g5380...    40   0.098
tr|B7FKA1|B7FKA1_MEDTR Putative uncharacterized protein OS=Medic...    35   3.2  
tr|B6SQD6|B6SQD6_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.1  
tr|B2EKE5|B2EKE5_9BACT Putative uncharacterized protein OS=bacte...    33   9.2  

>tr|A7PNQ5|A7PNQ5_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021351001
           PE=4 SV=1
          Length = 357

 Score = 46.6 bits (109), Expect = 8e-04
 Identities = 20/28 (71%), Positives = 23/28 (82%)
 Frame = +1

Query: 1   LPGDNEPLPDVASRMFEPPLRAWAVPKE 84
           LPGD+ P PDVAS+ FEPPLRAWA  +E
Sbjct: 284 LPGDDAPPPDVASKHFEPPLRAWAANQE 311


>tr|B8A143|B8A143_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 372

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = +1

Query: 1   LPGDN---EPLPDVASRMFEPPLRAWAVPKERSEPQEDPTAQK 120
           LPG++   +P PDVA +MFEPPLRAWA  +   E   D  + K
Sbjct: 321 LPGEDAPQQPPPDVAGKMFEPPLRAWAAARPAQEDDSDSGSGK 363


>tr|B6U627|B6U627_MAIZE Armadillo/beta-catenin-like repeat family
           protein OS=Zea mays PE=2 SV=1
          Length = 372

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = +1

Query: 1   LPGDN---EPLPDVASRMFEPPLRAWAVPKERSEPQEDPTAQK 120
           LPG++   +P PDVA +MFEPPLRAWA  +   E   D  + K
Sbjct: 321 LPGEDAPQQPPPDVAGKMFEPPLRAWAAARPAQEDDSDSGSGK 363


>tr|B6TK50|B6TK50_MAIZE Armadillo/beta-catenin-like repeat family
           protein OS=Zea mays PE=2 SV=1
          Length = 372

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = +1

Query: 1   LPGDN---EPLPDVASRMFEPPLRAWAVPKERSEPQEDPTAQK 120
           LPG++   +P PDVA +MFEPPLRAWA  +   E   D  + K
Sbjct: 321 LPGEDAPQQPPPDVAGKMFEPPLRAWAAARPAQEDDSDSGSGK 363


>tr|Q9SR28|Q9SR28_ARATH F3L24.22 protein OS=Arabidopsis thaliana
           GN=F3L24.22 PE=4 SV=1
          Length = 387

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = +1

Query: 1   LPGDNEPLPDVASRMFEPPLRAWAVPKERSEPQEDP 108
           LPG++   PDVAS++FEPPLRA A  +  +E +++P
Sbjct: 346 LPGEDALPPDVASKLFEPPLRASAANRNATEKKDEP 381


>tr|Q8LDQ1|Q8LDQ1_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 363

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = +1

Query: 1   LPGDNEPLPDVASRMFEPPLRAWAVPKERSEPQEDP 108
           LPG++   PDVAS++FEPPLRA A  +  +E +++P
Sbjct: 322 LPGEDALPPDVASKLFEPPLRASAANRNATEKKDEP 357


>tr|Q84J81|Q84J81_ARATH Putative uncharacterized protein At3g09350
           OS=Arabidopsis thaliana GN=At3g09350 PE=2 SV=1
          Length = 363

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = +1

Query: 1   LPGDNEPLPDVASRMFEPPLRAWAVPKERSEPQEDP 108
           LPG++   PDVAS++FEPPLRA A  +  +E +++P
Sbjct: 322 LPGEDALPPDVASKLFEPPLRASAANRNATEKKDEP 357


>tr|B8LQZ3|B8LQZ3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 400

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +1

Query: 1   LPGDNEPLPDVASRMFEPPLRAWAVPK 81
           LP ++E  PD+AS+ FEPPLRAWA P+
Sbjct: 323 LPEEDELPPDIASKHFEPPLRAWAAPR 349


>tr|A9NXJ2|A9NXJ2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 400

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 17/27 (62%), Positives = 22/27 (81%)
 Frame = +1

Query: 1   LPGDNEPLPDVASRMFEPPLRAWAVPK 81
           LP ++E  PD+AS+ FEPPLRAWA P+
Sbjct: 323 LPEEDELPPDIASKHFEPPLRAWAAPR 349


>tr|A8MQ87|A8MQ87_ARATH Uncharacterized protein At3g09350.2
           OS=Arabidopsis thaliana GN=At3g09350 PE=4 SV=1
          Length = 327

 Score = 42.0 bits (97), Expect = 0.020
 Identities = 18/36 (50%), Positives = 27/36 (75%)
 Frame = +1

Query: 1   LPGDNEPLPDVASRMFEPPLRAWAVPKERSEPQEDP 108
           LPG++   PDVAS++FEPPLRA A  +  +E +++P
Sbjct: 286 LPGEDALPPDVASKLFEPPLRASAANRNATEKKDEP 321