BP913514 [AcEST]

BP913514
Clone id	YMU001_000031_A12
Library	YMU01
Length	393
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000031_A12.
Accession	BP913514
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	AGGCGCTCCTCCTGCCCTGCCCGGACACTGGCAAGTCGATCTTCCTTCTCTCGTCGCTTG CGTACATTGGCCTGAAAGACTCTTCAAGAATCAATTGGCTGTGCAATTCACCATTTTAAA CTTTTCATATTTCTACTTCAACTTTCAAACCTCTAACATAGCTGGATTGACACCACGGTC GTACATGTATTCAGAAGTTGGGATTTTGACCAACTCCTCTTTCCCTCTTGATTTTCCAAT GCCAGCATTAGCCAAAGCATCTCGGGCAGCCTTCTTTGCCTGAAGTTTTTTGATACGCTG AAAGTCCAAATCTGAGAGAATGCCATCACCATCTTGCCGGTTCTCTCCTGCTAACTTACT GTCATCTTGACTTTGATTCACCAGTAACTTCTT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q2LQK5
Definition	sp\|Q2LQK5\|SYL_SYNAS Leucyl-tRNA synthetase OS=Syntrophus aciditrophicus (strain SB)
Align length	39
Score (bit)	28.9
E-value	8.3
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913514\|Adiantum capillus-veneris mRNA, clone: YMU001_000031_A12. (370 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q2LQK5\|SYL_SYNAS Leucyl-tRNA synthetase OS=Syntrophus aciditr... 29 8.3 >sp\|Q2LQK5\|SYL_SYNAS Leucyl-tRNA synthetase OS=Syntrophus aciditrophicus (strain SB) GN=leuS PE=3 SV=1 Length = 862 Score = 28.9 bits (63), Expect = 8.3 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Frame = -3 Query: 332 VSRREPARW*WHSLRF------GLSAYQKTSGKEGCPRC 234 VS EP + W L F GL AY+KTS CPRC Sbjct: 125 VSTCEPVYYRWEQLFFLWMYEKGL-AYKKTSSVNWCPRC 162
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A9TQ79
Definition	tr\|A9TQ79\|A9TQ79_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length	81
Score (bit)	32.7
E-value	0.063
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP913514\|Adiantum capillus-veneris mRNA, clone: YMU001_000031_A12. (370 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A9TQ79\|A9TQ79_PHYPA Predicted protein OS=Physcomitrella paten... 33 0.063 >tr\|A9TQ79\|A9TQ79_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148946 PE=4 SV=1 Length = 769 Score = 32.7 bits (73), Expect(2) = 0.063 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%) Frame = -1 Query: 370 KKLLVNQSQDDSKLAGENRQDGDGILSDLDFQRIXXXXXXXXXXXXXXXAGIGKSRGK-- 197 KK+ ++ + + + +R DGDGILS+ DFQRI G+ K+ GK Sbjct: 633 KKMYASKVEQKAAIEVVSR-DGDGILSNEDFQRIRELQAKRAAKAAMAEHGLSKA-GKFR 690 Query: 196 -EELVKIPTSEYMYDRGVNPA 137 E VK+ + ++ VNPA Sbjct: 691 QEIAVKLDKHGNLNEKRVNPA 711 Score = 26.6 bits (57), Expect(2) = 0.063 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = -2 Query: 51 QANVRKRREKEDRLASV 1 +A +RKR+EKE+R ASV Sbjct: 714 EARIRKRQEKEERQASV 730