BP913517
Clone id YMU001_000031_B03
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGCATATATTAGTGAAACTCCAGAAGCCCTAATTACTTGTGAGCTACCGGATGAACCCA
GGAGAGACTCCATTAAATACTCCCTTTGTATGTCCTATAAACCAAAGGCGTTCATTAAAT
CCTTGGTGAAAAAGAGCAACTAACTACCTTGTATATGAACCCGAAATTGCTGTGTGGAAA
AGCCACCGCACATCACTACAAGCGACCTGAAACCCTTCCTCTGATAAAGATGGTAACTAT
GGTACAATTGAAGTTTGTTTGAGAAGACCAACTTACTCGTTGAAAATTGCCTACACCATG
TGGATTGATGAGCGCATATGCTAGAGGTAATCTTTCAAAAGGACGACAAAGAAAACATTC
CTTTCCAGCATCAGCAATATTCACCCCAAGTCAAGCTTCAAAATACCCTTCCTGCAGCAT
ATGATAAGCAATGTGCTCTTCAGTCTGTGTGTTGTATGTGCACGATGTATTAGACCAATG
CTTTGTATCTCTCCAACCACGAACTCTGGCGATACAAAGGCGTTGTAGCCTCTCATCGAG
AGCTC
■■Homology search results ■■ -
sp_hit_id Q01263
Definition sp|Q01263|HYUB_PSESN Hydantoin utilization protein B OS=Pseudomonas sp. (strain NS671)
Align length 49
Score (bit) 29.6
E-value 9.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913517|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B03.
(545 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q01263|HYUB_PSESN Hydantoin utilization protein B OS=Pseudomo... 30 9.9

>sp|Q01263|HYUB_PSESN Hydantoin utilization protein B OS=Pseudomonas
sp. (strain NS671) GN=hyuB PE=3 SV=1
Length = 592

Score = 29.6 bits (65), Expect = 9.9
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = -3

Query: 336 ERLPLAYALINPH----GVGNFQRVSWSSQTNFNCTIVTIFIRGRVSGR 202
+ L A A + PH GVGN Q V++S Q+N N + + G GR
Sbjct: 366 DTLMKALAQVVPHQVSAGVGNLQVVAFSGQSNENYWVYMDIMEGSYGGR 414


tr_hit_id B3LCX1
Definition tr|B3LCX1|B3LCX1_PLAKH Putative uncharacterized protein OS=Plasmodium knowlesi (strain H)
Align length 38
Score (bit) 33.5
E-value 7.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913517|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B03.
(545 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3LCX1|B3LCX1_PLAKH Putative uncharacterized protein OS=Plasm... 33 7.6
tr|A3IWB0|A3IWB0_9CHRO Putative uncharacterized protein OS=Cyano... 33 9.9

>tr|B3LCX1|B3LCX1_PLAKH Putative uncharacterized protein
OS=Plasmodium knowlesi (strain H) GN=PKH_144990 PE=4
SV=1
Length = 626

Score = 33.5 bits (75), Expect = 7.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2

Query: 331 ITSSICAHQSTWCRQFSTSKLVFSNKLQLYHSYHLYQR 218
+T IC +QST +QF KL++ K L HSY + ++
Sbjct: 508 LTVGICIYQSTDIQQFEKVKLIYFFKKMLMHSYEMKEQ 545


>tr|A3IWB0|A3IWB0_9CHRO Putative uncharacterized protein
OS=Cyanothece sp. CCY 0110 GN=CY0110_06719 PE=4 SV=1
Length = 424

Score = 33.1 bits (74), Expect = 9.9
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = -3

Query: 537 DERLQRLCIAR--VRGWRDTKHWSNTSCTYNTQTEEHIAYHMLQEGYFEA*LGVNIADAG 364
+E+ Q L IAR + + K WS+ Y EE Y + + G F+ + +A+
Sbjct: 61 EEQRQMLSIARHLLAQYASPKLWSDALDRYQEYPEETRGYEITELGTFQRQTNITVANNR 120

Query: 363 KECFLCRPFERLPLAYALINPHGVGNFQRVSWSSQTNFNCTI 238
E + ER L P + + VSW+++ + C +
Sbjct: 121 FEVY-----ER-----TLTTPVALSQRKEVSWATEGQYKCEV 152