BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913518|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B04.
         (449 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6W5T0|RPOB_KINRD DNA-directed RNA polymerase subunit beta OS...    29   8.0  
sp|Q0BYP2|GCSPA_HYPNA Probable glycine dehydrogenase [decarboxyl...    29   8.0  

>sp|A6W5T0|RPOB_KINRD DNA-directed RNA polymerase subunit beta
           OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM
           14245 / SRS30216) GN=rpoB PE=3 SV=1
          Length = 1171

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 265 GPLTREAQNLTSILTTLIEPQSP*AGRGRYSFIKLHPP 152
           GPL   +   ++  +T I  QSP    GRYSF K+H P
Sbjct: 3   GPLLAASLPASAPNSTYIGNQSPRTVSGRYSFGKIHEP 40


>sp|Q0BYP2|GCSPA_HYPNA Probable glycine dehydrogenase
           [decarboxylating] subunit 1 OS=Hyphomonas neptunium
           (strain ATCC 15444) GN=gcvPA PE=3 SV=1
          Length = 447

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -1

Query: 422 EHQERINMELHKIMTVQK*RSGSTKPI*TLVSAVKFHPKSTINLVI*KEILDRTSHQRSP 243
           +HQ  + +E H      K RS S+ P      A K H  +T++++I          QRS 
Sbjct: 45  DHQGELAVERHLTKLAAKNRSASSGPFFVGAGAYKHHVPATVDMII----------QRSE 94

Query: 242 KLNVHSDY 219
            L  ++ Y
Sbjct: 95  FLTTYTPY 102

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913518|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B04.
         (449 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0CDY7|Q0CDY7_ASPTN Predicted protein OS=Aspergillus terreus ...    38   0.22 

>tr|Q0CDY7|Q0CDY7_ASPTN Predicted protein OS=Aspergillus terreus
           (strain NIH 2624) GN=ATEG_08097 PE=4 SV=1
          Length = 1179

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -2

Query: 262 PLTREAQNLTSILTTLIEPQSP*AGRGRYSFIKLHPPATAVFPIIQPSI-TFKASVHTAK 86
           PL++ A N  +I      P++P  GR   S  +   PAT V P++ P     KA V    
Sbjct: 597 PLSKSADNAVTIPVKKYIPKTPATGRATRSMSRRAEPATVVLPLVYPRFGKKKAEVDIQD 656

Query: 85  LDKIEQS 65
           LD++ +S
Sbjct: 657 LDRLRES 663