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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913522
Clone id YMU001_000031_B09
Library
Length 341
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGCATTATCCCCAGCTTTCATCACAAAGAAGTCGATCAGGCACTCTATGCCCATCACTTG
CACTCTCACATCCGAGGCCACTCCCAAACACCTAGCTTTAGCATGGTTAGCCATCCTCAT
GCGCACATTCGACTTGGATACCGCCTTGACCCCTGTTCCTTCATCGTACTTTGTCATGAC
GCAAACCTGTGCTTCGCCATCAATATAGGCTTGAACCTGCATCCTTTTCTCGATGATAGC
ATCCATCAAAGGAAGAACATCTGTCGGGCTACCTACCCTGAGTGCCATATTTTGAACCGC
GTGCAAATTGCCTTTACCCCTTGGTAGCCTAGTGCTAACAC
■■Homology search results ■■ -
sp_hit_id Q6ZRP5
Definition sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204 OS=Homo sapiens
Align length 24
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913522|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B09.
         (341 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204 ...    31   1.7  
sp|Q31125|S39A7_MOUSE Zinc transporter SLC39A7 OS=Mus musculus G...    30   2.9  
sp|Q91994|OTX1_DANRE Homeobox protein OTX1 OS=Danio rerio GN=otx...    30   4.9  
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic O...    30   4.9  
sp|Q5ZLF4|ZNT5_CHICK Zinc transporter 5 OS=Gallus gallus GN=SLC3...    29   6.4  
sp|Q473Q8|UREE_RALEJ Urease accessory protein ureE OS=Ralstonia ...    29   6.4  
sp|Q5RFD5|S39A7_PONAB Zinc transporter SLC39A7 OS=Pongo abelii G...    29   6.4  
sp|Q8HY34|HBA_MONDO Hemoglobin subunit alpha OS=Monodelphis dome...    29   6.4  
sp|P56886|F16PA_SINMW Fructose-1,6-bisphosphatase class 1 OS=Sin...    29   6.4  
sp|Q91ZR5|CTSR1_MOUSE Cation channel sperm-associated protein 1 ...    29   6.4  
sp|P20482|CNC_DROME Segmentation protein cap'n'collar OS=Drosoph...    29   6.4  
sp|Q28CE7|ZNT5_XENTR Zinc transporter 5 OS=Xenopus tropicalis GN...    29   8.3  
sp|P23757|POXM_DROME Paired box pox-meso protein OS=Drosophila m...    29   8.3  
sp|P07548|DFD_DROME Homeotic protein deformed OS=Drosophila mela...    29   8.3  
sp|Q8K1L0|CREB5_MOUSE cAMP-responsive element-binding protein 5 ...    29   8.3  

>sp|Q6ZRP5|YD019_HUMAN Putative uncharacterized protein FLJ46204
           OS=Homo sapiens PE=2 SV=2
          Length = 223

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 55  HLHSHIRGHSQTPSFSMVSHPHAH 126
           H H+H  GH+ T + S  +H HAH
Sbjct: 120 HTHAHTHGHTHTRAHSTHAHTHAH 143


>sp|Q31125|S39A7_MOUSE Zinc transporter SLC39A7 OS=Mus musculus
           GN=Slc39a7 PE=1 SV=2
          Length = 476

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +1

Query: 16  FHHKE--VDQALYAHHLHSHIRGHSQTPSFSMVSHPHAH 126
           FHH      ++++  H HSH  GHS+       SH H+H
Sbjct: 67  FHHGHGHTHESIWHGHAHSHDHGHSREELHHGHSHGHSH 105


>sp|Q91994|OTX1_DANRE Homeobox protein OTX1 OS=Danio rerio GN=otx1
           PE=2 SV=1
          Length = 323

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 31  VDQALYAHHLHSHIRGHSQTP--SFSMVSHPHAHI 129
           VD   Y   +HSH   H  +P  + SM +HPH HI
Sbjct: 228 VDCGSYLAPMHSHHHPHQLSPMTASSMPTHPHHHI 262


>sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic
           OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2
          Length = 389

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 49  AHHLHSHIRGHSQTPSFSMVSHPHAH 126
           AHH HSH  GH      S +   HAH
Sbjct: 183 AHHRHSHPPGHDSCEGHSKIDIGHAH 208


>sp|Q5ZLF4|ZNT5_CHICK Zinc transporter 5 OS=Gallus gallus GN=SLC30A5
           PE=2 SV=1
          Length = 770

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 46  YAHHLHSHIRGHSQTPSFSMVSHPHAHIRLG 138
           +++H HSH  GH  + +    SH H+H+  G
Sbjct: 557 HSYHGHSHSHGHGHSHNDHGHSHGHSHVSSG 587


>sp|Q473Q8|UREE_RALEJ Urease accessory protein ureE OS=Ralstonia
           eutropha (strain JMP134) GN=ureE PE=3 SV=1
          Length = 221

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 46  YAHHLHSHIRGHSQTPSFSMVSHPHAH 126
           + HH H H  GHS + S S  SH H+H
Sbjct: 169 HEHHGHDHDHGHSHSHSHSH-SHSHSH 194


>sp|Q5RFD5|S39A7_PONAB Zinc transporter SLC39A7 OS=Pongo abelii
           GN=SLC39A7 PE=2 SV=1
          Length = 469

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 22  HKEVDQALYAHHLHSHIRGHSQTPSFSMVSHPHAHIRLGYR 144
           H    ++++  H H H  GHS        SH H+H  L +R
Sbjct: 64  HGHTHESIWHGHTHGHDHGHSHGDLHHGHSHGHSHESLYHR 104



 Score = 28.9 bits (63), Expect = 8.3
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 52  HHLHSHIRGHSQTPSFSMVSHPHAH 126
           HH HSH  GH  T       H H H
Sbjct: 55  HHGHSHAHGHGHTHESIWHGHTHGH 79


>sp|Q8HY34|HBA_MONDO Hemoglobin subunit alpha OS=Monodelphis
           domestica GN=HBA PE=2 SV=3
          Length = 142

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = +1

Query: 94  SFSMVSHPHAHIRLGYRLDPCSFIVLCHDANLCFAINIGLNLHPFLDDSI 243
           + S +S  HAH     ++DP +F  LCH+  +  A ++G +  P +  S+
Sbjct: 80  ALSALSDLHAH---NLKVDPVNFKFLCHNVLVTLASHLGKDFTPEIHASL 126


>sp|P56886|F16PA_SINMW Fructose-1,6-bisphosphatase class 1
           OS=Sinorhizobium medicae (strain WSM419) GN=fbp PE=3
           SV=2
          Length = 349

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 91  PSFSMVSHPHAHIRLGYRLDPCSFIVLCHDANLCFAINIGLNLHPFLDDSIHQR 252
           P+ S   + H  IRL Y  +P +FIV     +   +++  L+L P   +S+HQR
Sbjct: 260 PADSRKGYSHGRIRLVYEANPIAFIVENAGGSATTSVDRILDLVP---ESLHQR 310


>sp|Q91ZR5|CTSR1_MOUSE Cation channel sperm-associated protein 1
           OS=Mus musculus GN=Catsper1 PE=1 SV=1
          Length = 686

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  HHKEVDQALYAHHLHSHIRGHSQTPSFSMVSH 114
           HHKE  +  +  H+H HI  H ++PS S +SH
Sbjct: 224 HHKE-QRHYHGDHMHHHI--HHRSPSASQLSH 252
tr_hit_id B4L8E7
Definition tr|B4L8E7|B4L8E7_DROMO GI14398 OS=Drosophila mojavensis
Align length 36
Score (bit) 36.2
E-value 0.84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913522|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B09.
         (341 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4L8E7|B4L8E7_DROMO GI14398 OS=Drosophila mojavensis GN=GI143...    36   0.84 
tr|Q9W2X8|Q9W2X8_DROME CG15311 OS=Drosophila melanogaster GN=CG1...    36   1.1  
tr|B4NTR0|B4NTR0_DROSI GD24696 OS=Drosophila simulans GN=GD24696...    36   1.1  
tr|Q97RY8|Q97RY8_STRPN Putative uncharacterized protein OS=Strep...    35   1.9  
tr|B1IAI0|B1IAI0_STRPI Putative uncharacterized protein OS=Strep...    35   1.9  
tr|A5MKL2|A5MKL2_STRPN Putative uncharacterized protein OS=Strep...    35   1.9  
tr|A5LRM6|A5LRM6_STRPN Putative uncharacterized protein OS=Strep...    35   1.9  
tr|A5LAJ3|A5LAJ3_STRPN Putative uncharacterized protein OS=Strep...    35   1.9  
tr|B2IMV3|B2IMV3_STRPS Putative uncharacterized protein OS=Strep...    34   3.2  
tr|B8ZMM6|B8ZMM6_STRPN Putative uncharacterized protein OS=Strep...    34   3.2  
tr|A7Q5S9|A7Q5S9_VITVI Chromosome chr14 scaffold_54, whole genom...    34   3.2  
tr|Q9WHJ4|Q9WHJ4_9RETR Putative uncharacterized protein OS=Walle...    34   4.2  
tr|B5L809|B5L809_CYPCA Metal transcription factor 1.1 (Fragment)...    33   5.5  
tr|A9NJH5|A9NJH5_CYPCA Metal transcription factor 1 isoform a (F...    33   5.5  
tr|A9NJH4|A9NJH4_CYPCA Metal transcription factor 1 (Fragment) O...    33   5.5  
tr|A9NJH3|A9NJH3_CYPCA Metal transcription factor 1 (Fragment) O...    33   5.5  
tr|A5MVQ6|A5MVQ6_STRPN 50S ribosomal protein L1 OS=Streptococcus...    33   5.5  
tr|A5LM58|A5LM58_STRPN Putative uncharacterized protein OS=Strep...    33   5.5  
tr|A4HV61|A4HV61_LEIIN Ubiquitin carboxyl-terminal hydrolase OS=...    33   5.5  
tr|Q29LR0|Q29LR0_DROPS GA12158 OS=Drosophila pseudoobscura pseud...    33   7.1  
tr|B0WLN1|B0WLN1_CULQU Transcription factor GATA-4 OS=Culex quin...    33   7.1  
tr|B5E2N3|B5E2N3_STRP4 Putative uncharacterized protein OS=Strep...    33   9.3  
tr|B4M9K2|B4M9K2_DROVI GJ17899 OS=Drosophila virilis GN=GJ17899 ...    33   9.3  
tr|B3MSA6|B3MSA6_DROAN GF20833 OS=Drosophila ananassae GN=GF2083...    33   9.3  

>tr|B4L8E7|B4L8E7_DROMO GI14398 OS=Drosophila mojavensis GN=GI14398
           PE=4 SV=1
          Length = 752

 Score = 36.2 bits (82), Expect = 0.84
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 46  YAHHLHSHIRGHSQTPSFSMVSHPHAHIRLGYRLDP 153
           +AHH HSH   HS + S S  +H H H++    L P
Sbjct: 438 HAHHTHSHSHSHSHSHSHSHAAHHHHHLQHQVALPP 473


>tr|Q9W2X8|Q9W2X8_DROME CG15311 OS=Drosophila melanogaster
           GN=CG15311 PE=2 SV=1
          Length = 1161

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 19  HHKEVDQALYAHHLHSHIRGHSQTPSFSMVSHPHAHIRLGY 141
           HH    Q L  HH HSH  G++   + +   H H+H +LG+
Sbjct: 715 HHHHSGQHLGNHHHHSHHHGYNHNGAHNHHHHSHSHQKLGH 755


>tr|B4NTR0|B4NTR0_DROSI GD24696 OS=Drosophila simulans GN=GD24696
           PE=4 SV=1
          Length = 625

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 19  HHKEVDQALYAHHLHSHIRGHSQTPSFSMVSHPHAHIRLGY 141
           HH    Q L  HH HSH  G++   + +   H H+H +LG+
Sbjct: 180 HHHHSGQHLGNHHHHSHHHGYNHNGAHNHHHHSHSHQKLGH 220


>tr|Q97RY8|Q97RY8_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae GN=SP_0639 PE=4 SV=1
          Length = 93

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -3

Query: 213 QAYIDGEAQVCVMTKYDEGTGVKAVSKSNVRMRMANHAKARCLGVASDVRVQVMGIECLI 34
           QAYI+G   + V T Y E    + VS S       + A+  CLGV   ++V+ +G  CL+
Sbjct: 36  QAYIEGTTTLQVWTAYQESDLTRFVSLS---YSSEDCAEIDCLGVKKLIKVEKLGANCLL 92


>tr|B1IAI0|B1IAI0_STRPI Putative uncharacterized protein
           OS=Streptococcus pneumoniae (strain Hungary19A-6)
           GN=SPH_0730 PE=4 SV=1
          Length = 92

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -3

Query: 213 QAYIDGEAQVCVMTKYDEGTGVKAVSKSNVRMRMANHAKARCLGVASDVRVQVMGIECLI 34
           QAYI+G   + V T Y E    + VS S       + A+  CLGV   ++V+ +G  CL+
Sbjct: 35  QAYIEGTTTLQVWTAYQESDLTRFVSLS---YSSEDCAEIDCLGVKKLIKVEKLGANCLL 91


>tr|A5MKL2|A5MKL2_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae SP19-BS75
           GN=CGSSp19BS75_05277 PE=4 SV=1
          Length = 92

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = -3

Query: 213 QAYIDGEAQVCVMTKYDEG--TGVKAVSKSNVRMRMANHAKARCLGVASDVRVQVMGIEC 40
           QAYI+G   + V T Y E   TG  ++S S+      + A+  CLGV   ++V+ +G  C
Sbjct: 35  QAYIEGTTTLQVWTAYQESDLTGFVSLSYSS-----EDCAEIDCLGVKKLIKVEKLGANC 89

Query: 39  LI 34
           L+
Sbjct: 90  LL 91


>tr|A5LRM6|A5LRM6_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae SP9-BS68 GN=CGSSp9BS68_06145
           PE=4 SV=1
          Length = 92

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 21/60 (35%), Positives = 31/60 (51%)
 Frame = -3

Query: 213 QAYIDGEAQVCVMTKYDEGTGVKAVSKSNVRMRMANHAKARCLGVASDVRVQVMGIECLI 34
           QAYI+G   + V T Y E    + VS S       + A+  CLGV   ++V+ +G  CL+
Sbjct: 35  QAYIEGTTTLQVWTAYQESDLTRFVSLS---YSSEDCAEIDCLGVKKLIKVEKLGANCLL 91


>tr|A5LAJ3|A5LAJ3_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae SP3-BS71 GN=CGSSp3BS71_07799
           PE=4 SV=1
          Length = 92

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
 Frame = -3

Query: 213 QAYIDGEAQVCVMTKYDEG--TGVKAVSKSNVRMRMANHAKARCLGVASDVRVQVMGIEC 40
           QAYI+G   + V T Y E   TG  ++S S+      + A+  CLGV   ++V+ +G  C
Sbjct: 35  QAYIEGTTTLQVWTAYQESDLTGFVSLSYSS-----EDCAEIDCLGVKKLIKVEKLGANC 89

Query: 39  LI 34
           L+
Sbjct: 90  LL 91


>tr|B2IMV3|B2IMV3_STRPS Putative uncharacterized protein
           OS=Streptococcus pneumoniae (strain CGSP14) GN=SPCG_0597
           PE=4 SV=1
          Length = 72

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -3

Query: 213 QAYIDGEAQVCVMTKYDEG--TGVKAVSKSNVRMRMANHAKARCLGVASDVRVQVMGIEC 40
           QAYI+G   + V T Y E   TG   +S S+      + A+  CLGV   ++V+ +G  C
Sbjct: 15  QAYIEGTTTLQVWTAYQESDLTGFVRLSYSS-----EDCAEIDCLGVKKLIKVEKLGANC 69

Query: 39  LI 34
           L+
Sbjct: 70  LL 71


>tr|B8ZMM6|B8ZMM6_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae ATCC 700669 GN=SPN23F05770
           PE=4 SV=1
          Length = 72

 Score = 34.3 bits (77), Expect = 3.2
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -3

Query: 213 QAYIDGEAQVCVMTKYDEG--TGVKAVSKSNVRMRMANHAKARCLGVASDVRVQVMGIEC 40
           QAYI+G   + V T Y E   TG   +S S+      + A+  CLGV   ++V+ +G  C
Sbjct: 15  QAYIEGTTTLQVWTAYQESDLTGFVRLSYSS-----EDCAEIDCLGVKKLIKVEKLGANC 69

Query: 39  LI 34
           L+
Sbjct: 70  LL 71