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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913525
Clone id YMU001_000031_B12
Library
Length 578
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACTGGCAAAAATCCAATGCATGGGCAATTGTACTCACAGCAAGCCAGAAAACCCTGCCAG
TCGTTATTGTCGTGATAGGGAGCGTTGGCGGCTTGATGGGTGAACCAGGCCTCCTTGTTC
TACCTTGTATGGCCACGCATATCACCCAGATCATCATCGATTCCTTTCCTGTCAGGTTCT
GGATTGAAGGTGACCTCCAAAGGTCTCTGCAAAAAACTAGCTAGGTACGTTTCCCCGAAG
TGGCACAGGTAACACGACAGCGGCAGCATTTGCGAACTGACATTTGTGCTCGATGGTATA
ACCACATTCCCAGTCTACTCAGTTCTTGAGCTGTTTCAAGTGAAAGCATGCTGTAGCCCC
ATTTCAATAGTGGAATCTTCAGAACATGAGGGAGATTATTGTCTCATGTATTGCAAAATT
AGCAAAGCCTCCTTTTGAGAAGCACCAAATATTATTCTTGCTGAGCCCAAAAAGGTTGGG
GCAACTGCTTAACATTGATACCATAGCATTGATTTGTTCTTTCTTGTATGGTACAAGAAC
AAGTTAATTTGTTCTTTGCTAATGACCACTCCCCAATT
■■Homology search results ■■ -
sp_hit_id Q8TGN6
Definition sp|Q8TGN6|YH137_YEAST Uncharacterized protein YHR137C-A OS=Saccharomyces cerevisiae
Align length 40
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913525|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B12.
         (578 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TGN6|YH137_YEAST Uncharacterized protein YHR137C-A OS=Sacch...    32   2.3  
sp|Q9DBP0|NPT2B_MOUSE Sodium-dependent phosphate transport prote...    25   8.5  
sp|Q6MRX5|RPOC_MYCMS DNA-directed RNA polymerase subunit beta' O...    30   8.7  
sp|Q2ST47|RPOC_MYCCT DNA-directed RNA polymerase subunit beta' O...    30   8.7  

>sp|Q8TGN6|YH137_YEAST Uncharacterized protein YHR137C-A
           OS=Saccharomyces cerevisiae GN=YHR137C-A PE=2 SV=1
          Length = 216

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 16/40 (40%), Positives = 27/40 (67%)
 Frame = +1

Query: 265 SICELTFVLDGITTFPVYSVLELFQVKACCSPISIVESSE 384
           S+ ++ F+L G+T  PV S L++  VK   S I++V+SS+
Sbjct: 34  SLSKVRFILMGMTFAPVASTLDIAGVKVNSSIITVVDSSQ 73


>sp|Q9DBP0|NPT2B_MOUSE Sodium-dependent phosphate transport protein
           2B OS=Mus musculus GN=Slc34a2 PE=2 SV=1
          Length = 697

 Score = 25.0 bits (53), Expect(2) = 8.5
 Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = -2

Query: 391 PHVLKIPLLKWGYSML---SLETAQELSRLGMWLYHRAQMSVRKCCRCRVTC 245
           P +L + L  W +  L   SL+    +  L    + R     R CC CRV C
Sbjct: 580 PRILPLKLRDWNFLPLWMHSLKPWDNVISLATTCFQR-----RCCCCCRVCC 626



 Score = 22.7 bits (47), Expect(2) = 8.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 271 KCCRCRVTCATSGK 230
           KCCRC   C   G+
Sbjct: 636 KCCRCSKCCRDQGE 649


>sp|Q6MRX5|RPOC_MYCMS DNA-directed RNA polymerase subunit beta'
            OS=Mycoplasma mycoides subsp. mycoides SC GN=rpoC PE=3
            SV=1
          Length = 1255

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 377  LQNMREIIVSCIAKLAKPPFEKHQI 451
            +QN +E++  CI K  +PP  K QI
Sbjct: 1156 IQNYKEVVQDCIVKSIRPPLSKAQI 1180


>sp|Q2ST47|RPOC_MYCCT DNA-directed RNA polymerase subunit beta'
            OS=Mycoplasma capricolum subsp. capricolum (strain
            California kid / ATCC 27343 / NCTC 10154) GN=rpoC PE=3
            SV=1
          Length = 1255

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 377  LQNMREIIVSCIAKLAKPPFEKHQI 451
            +QN +E++  CI K  +PP  K QI
Sbjct: 1156 IQNYKEVVQDCIVKSIRPPLSKAQI 1180
tr_hit_id B8LLL0
Definition tr|B8LLL0|B8LLL0_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 69
Score (bit) 68.6
E-value 2.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913525|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_B12.
         (578 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LLL0|B8LLL0_PICSI Putative uncharacterized protein OS=Picea...    69   2e-10
tr|A9S831|A9S831_PHYPA Predicted protein OS=Physcomitrella paten...    65   3e-09
tr|A7QFD2|A7QFD2_VITVI Chromosome undetermined scaffold_87, whol...    63   1e-08
tr|Q6ESG1|Q6ESG1_ORYSJ Os02g0531200 protein OS=Oryza sativa subs...    62   3e-08
tr|B8AJ09|B8AJ09_ORYSI Putative uncharacterized protein OS=Oryza...    62   3e-08
tr|A3A7L4|A3A7L4_ORYSJ Putative uncharacterized protein OS=Oryza...    62   3e-08
tr|A7QLK0|A7QLK0_VITVI Chromosome undetermined scaffold_119, who...    61   4e-08
tr|B6TYA0|B6TYA0_MAIZE Bile acid sodium symporter OS=Zea mays PE...    61   5e-08
tr|B4FID2|B4FID2_MAIZE Putative uncharacterized protein OS=Zea m...    61   5e-08
tr|Q9LYM5|Q9LYM5_ARATH Putative uncharacterized protein F18O21_1...    59   2e-07
tr|A5BST0|A5BST0_VITVI Putative uncharacterized protein OS=Vitis...    42   0.024
tr|Q01E11|Q01E11_OSTTA Cysteine proteinase Cathepsin F (ISS) OS=...    39   0.16 
tr|A8HYT2|A8HYT2_CHLRE Predicted protein (Fragment) OS=Chlamydom...    38   0.46 
tr|A4RT86|A4RT86_OSTLU BASS family transporter: sodium ion/bile ...    37   1.0  
tr|A7RYT1|A7RYT1_NEMVE Predicted protein (Fragment) OS=Nematoste...    35   2.3  

>tr|B8LLL0|B8LLL0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 426

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 34/69 (49%), Positives = 48/69 (69%)
 Frame = +3

Query: 6   QKSNAWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWI 185
           +++NA AI++ ASQKTLP           ++GE GLLV+PC+A HI QII+DSF V  W+
Sbjct: 355 KENNARAIIIVASQKTLPVMVAIVGRLGGVLGEAGLLVIPCVAAHINQIIMDSFLVNIWL 414

Query: 186 EGDLQRSLQ 212
           + D +R+LQ
Sbjct: 415 QQD-KRALQ 422


>tr|A9S831|A9S831_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163390 PE=4 SV=1
          Length = 408

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 31/63 (49%), Positives = 41/63 (65%)
 Frame = +3

Query: 6   QKSNAWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWI 185
           Q S A A++L ASQKTLP            +GE GLLVLPC+ATH++QI+ DS  V +W+
Sbjct: 338 QTSAARAVILVASQKTLPVLVAVVAKLNGALGESGLLVLPCIATHLSQILFDSVLVGYWL 397

Query: 186 EGD 194
           + D
Sbjct: 398 DSD 400


>tr|A7QFD2|A7QFD2_VITVI Chromosome undetermined scaffold_87, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00037375001 PE=4 SV=1
          Length = 336

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 32/67 (47%), Positives = 41/67 (61%)
 Frame = +3

Query: 6   QKSNAWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWI 185
           +K NA A+++ +SQK L             +GE GLLVLPC+A HI QIIIDSF V FW+
Sbjct: 265 KKENARALLVVSSQKALLIVVAVVEQLGGALGESGLLVLPCVAAHINQIIIDSFLVNFWL 324

Query: 186 EGDLQRS 206
           + D   S
Sbjct: 325 QKDRSSS 331


>tr|Q6ESG1|Q6ESG1_ORYSJ Os02g0531200 protein OS=Oryza sativa subsp.
           japonica GN=P0605D08.11 PE=4 SV=1
          Length = 423

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = +3

Query: 18  AWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWIEGDL 197
           A A++L ASQKTLP            +GE GLLV+PC+A HI QIIIDS  V +W + D 
Sbjct: 358 ARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHINQIIIDSIIVNWWRQRDQ 417

Query: 198 Q 200
           Q
Sbjct: 418 Q 418


>tr|B8AJ09|B8AJ09_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07515 PE=4 SV=1
          Length = 423

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = +3

Query: 18  AWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWIEGDL 197
           A A++L ASQKTLP            +GE GLLV+PC+A HI QIIIDS  V +W + D 
Sbjct: 358 ARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHINQIIIDSIIVNWWRQRDQ 417

Query: 198 Q 200
           Q
Sbjct: 418 Q 418


>tr|A3A7L4|A3A7L4_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006786 PE=4 SV=1
          Length = 476

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 38/61 (62%)
 Frame = +3

Query: 18  AWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWIEGDL 197
           A A++L ASQKTLP            +GE GLLV+PC+A HI QIIIDS  V +W + D 
Sbjct: 411 ARAVILVASQKTLPVLVAVVEQLGGALGESGLLVIPCVAAHINQIIIDSIIVNWWRQRDQ 470

Query: 198 Q 200
           Q
Sbjct: 471 Q 471


>tr|A7QLK0|A7QLK0_VITVI Chromosome undetermined scaffold_119, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00001652001 PE=4 SV=1
          Length = 386

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 29/63 (46%), Positives = 38/63 (60%)
 Frame = +3

Query: 6   QKSNAWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWI 185
           ++ N  A +L ASQKTLP            +GE GLLVLPC+A H+ QII+DSF +  W+
Sbjct: 315 KRQNTVAFLLVASQKTLPVMVAVVEQLHGTLGESGLLVLPCVAAHLNQIIMDSFLINIWL 374

Query: 186 EGD 194
             D
Sbjct: 375 GKD 377


>tr|B6TYA0|B6TYA0_MAIZE Bile acid sodium symporter OS=Zea mays PE=2
           SV=1
          Length = 404

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +3

Query: 6   QKSNAWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWI 185
           +K  A A++L ASQKTLP             GE G LV+PC+A HI QIIIDS  V +W 
Sbjct: 335 KKEYARAVILVASQKTLPVLVAVVEQLGGAFGESGFLVIPCVAAHINQIIIDSIIVNWWR 394

Query: 186 EGDLQ 200
           + D Q
Sbjct: 395 QKDQQ 399


>tr|B4FID2|B4FID2_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 87

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +3

Query: 6   QKSNAWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWI 185
           +K  A A++L ASQKTLP             GE G LV+PC+A HI QIIIDS  V +W 
Sbjct: 18  KKEYARAVILVASQKTLPVLVAVVEQLGGAFGESGFLVIPCVAAHINQIIIDSIIVNWWR 77

Query: 186 EGDLQ 200
           + D Q
Sbjct: 78  QKDQQ 82


>tr|Q9LYM5|Q9LYM5_ARATH Putative uncharacterized protein F18O21_120
           OS=Arabidopsis thaliana GN=F18O21_120 PE=4 SV=1
          Length = 341

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 28/59 (47%), Positives = 36/59 (61%)
 Frame = +3

Query: 9   KSNAWAIVLTASQKTLPXXXXXXXXXXXLMGEPGLLVLPCMATHITQIIIDSFPVRFWI 185
           K N+ A++L +SQKTLP             GE GLLVLPC+A H+ QI+IDS  V  W+
Sbjct: 270 KENSTAVLLVSSQKTLPVMVAVVEQLGGAFGETGLLVLPCVAAHLNQIMIDSVLVNLWL 328