BP913529 |
Clone id |
YMU001_000031_C04 |
Library |
YMU01 |
Length |
342 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000031_C04. |
Accession |
BP913529 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGGAACATTACTAGTGATGGTGGTCATAGGGACAGGCAACTTCTTATCATAAACAATCT CGAAGGGGACTTTGTTTGTGGTAGAGTGGGGAGTGTTGTTGTAAGCAATTGGAGGAGAGG AAGGTGCTCGTCCCAATTTGTTGTATTGTCTACTGCGTAGGCCCTAAGGAGGTCAAGGAT AGTACTATTGGTAGCTTCGGTCTGGCCATTACTTTTAGGGTGGAAAGCAGACATGAAGTC CATTGTGGAGCCTAGGTTAGTGCACAGAGCATACCAAAAATGATTACAAAATTGACCATC ACTATAAATAAAAAAAAAGTTTAGGAAAACCATGGTGAGGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UR07 |
Definition |
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe |
Align length |
60 |
Score (bit) |
38.9 |
E-value |
2.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913529|Adiantum capillus-veneris mRNA, clone: YMU001_000031_C04. (342 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 39 2e-05 sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 39 2e-05 sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 39 2e-05 sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 41 5e-05 sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 40 1e-04 sp|A4FUB7|GIN1_BOVIN Gypsy retrotransposon integrase-like protei... 32 0.75 sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha... 26 1.1 sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus... 31 1.7 sp|P03359|POL_WMSV Pol polyprotein (Fragment) OS=Woolly monkey s... 30 2.9 sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ... 30 2.9 sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr... 30 3.7 sp|Q0S3D9|RL13_RHOSR 50S ribosomal protein L13 OS=Rhodococcus sp... 29 6.4 sp|Q5RBK0|GIN1_PONAB Gypsy retrotransposon integrase-like protei... 29 8.3 sp|Q8X8G9|YIHI_ECO57 UPF0241 protein yihI OS=Escherichia coli O1... 29 8.3 sp|Q9Y468|LMBL1_HUMAN Lethal(3)malignant brain tumor-like protei... 29 8.3
>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1 Length = 1333
Score = 38.9 bits (89), Expect(2) = 2e-05 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = -1
Query: 303 SDGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124 +D F + W M F + P+++GQTE TN T+ LLR + W +H Sbjct: 1051 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1110
Score = 28.1 bits (61), Expect(2) = 2e-05 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 +YNN HS T PFEIV+ Sbjct: 1117 SYNNAIHSATQMTPFEIVH 1135
>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1 Length = 1333
Score = 38.9 bits (89), Expect(2) = 2e-05 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = -1
Query: 303 SDGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124 +D F + W M F + P+++GQTE TN T+ LLR + W +H Sbjct: 1051 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1110
Score = 28.1 bits (61), Expect(2) = 2e-05 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 +YNN HS T PFEIV+ Sbjct: 1117 SYNNAIHSATQMTPFEIVH 1135
>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1 Length = 1333
Score = 38.9 bits (89), Expect(2) = 2e-05 Identities = 18/60 (30%), Positives = 27/60 (45%) Frame = -1
Query: 303 SDGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124 +D F + W M F + P+++GQTE TN T+ LLR + W +H Sbjct: 1051 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1110
Score = 28.1 bits (61), Expect(2) = 2e-05 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 +YNN HS T PFEIV+ Sbjct: 1117 SYNNAIHSATQMTPFEIVH 1135
>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3 Length = 1547
Score = 41.2 bits (95), Expect(2) = 5e-05 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = -1
Query: 267 LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNW 133 L LG SA HP+++GQ+E T T+ LLRAYA N NW Sbjct: 1249 LTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNW 1293
Score = 24.6 bits (52), Expect(2) = 5e-05 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -3
Query: 103 YNNTPHSTTNKVPFEI 56 YN+TP T K PFEI Sbjct: 1304 YNSTPTRTLGKSPFEI 1319
>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2 Length = 1498
Score = 39.7 bits (91), Expect(2) = 1e-04 Identities = 20/45 (44%), Positives = 25/45 (55%) Frame = -1
Query: 267 LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNW 133 L LG SA HP+++GQ+E T T+ LLRAY N NW Sbjct: 1275 LTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNW 1319
Score = 24.6 bits (52), Expect(2) = 1e-04 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -3
Query: 103 YNNTPHSTTNKVPFEI 56 YN+TP T K PFEI Sbjct: 1330 YNSTPTRTLGKSPFEI 1345
>sp|A4FUB7|GIN1_BOVIN Gypsy retrotransposon integrase-like protein 1 OS=Bos taurus GN=GIN1 PE=2 SV=1 Length = 499
Score = 32.3 bits (72), Expect = 0.75 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 9/81 (11%) Frame = -1
Query: 339 LTMVFLNFFFIYSDGQ---------FCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATN 187 ++ +N FF+Y Q F + LC G T + + ++ E+T Sbjct: 163 ISKAIINIFFLYGPPQKIIMDQRDEFIHQINVELCELFG-TKQIVISHASQTINPAESTP 221
Query: 186 STILDLLRAYAVDNTTNWDEH 124 STI L + VD +WD+H Sbjct: 222 STIKTFLSKHCVDYPNDWDDH 242
>sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorhabditis elegans GN=K02A2.6 PE=2 SV=1 Length = 1268
Score = 26.2 bits (56), Expect(2) = 1.1 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = -3
Query: 109 IAYNNTPHSTTN-KVPFEIVYDKKLPVPMTTI 17 I+Y NTPHS N P E + +K+ M+ + Sbjct: 974 ISYRNTPHSALNGSTPAECHFGRKIRTTMSLL 1005
Score = 24.6 bits (52), Expect(2) = 1.1 Identities = 10/39 (25%), Positives = 19/39 (48%) Frame = -1
Query: 294 QFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTI 178 Q +H + +C + G + ++P+SNG E T+ Sbjct: 913 QLTSHLFAQMCQSHGIEHKTSAVYYPRSNGAAERFVDTL 951
>sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus GN=pol PE=1 SV=2 Length = 1143
Score = 31.2 bits (69), Expect = 1.7 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1
Query: 252 GSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNW 133 G ++F + +HP+S + E NS I LL V T W Sbjct: 954 GIHLEFSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTKW 993
>sp|P03359|POL_WMSV Pol polyprotein (Fragment) OS=Woolly monkey sarcoma virus GN=pol PE=3 SV=1 Length = 294
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1
Query: 267 LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVD 148 L T LG A+ P+S+GQ E N TI + L A++ Sbjct: 84 LATQLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLALE 123
>sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus GN=pol PE=3 SV=1 Length = 1165
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -1
Query: 267 LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVD 148 L T LG A+ P+S+GQ E N TI + L A++ Sbjct: 955 LATQLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLALE 994
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2I5E5 |
Definition |
tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris |
Align length |
58 |
Score (bit) |
62.0 |
E-value |
7.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913529|Adiantum capillus-veneris mRNA, clone: YMU001_000031_C04. (342 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris ... 62 7e-11 tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus ... 64 7e-11 tr|Q6MWG4|Q6MWG4_ORYSJ B1160F02.12 protein OS=Oryza sativa subsp... 68 3e-10 tr|Q25AL5|Q25AL5_ORYSA H0102C09.1 protein OS=Oryza sativa GN=H01... 68 3e-10 tr|Q949K9|Q949K9_CICAR Putative polyprotein (Fragment) OS=Cicer ... 62 3e-10 tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 54 3e-10 tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 53 3e-10 tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa GN=... 53 4e-10 tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 53 4e-10 tr|Q9SLQ0|Q9SLQ0_ORYSI Gag-pol polyprotein (Fragment) OS=Oryza s... 53 4e-10 tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 63 4e-10 tr|Q6L3S2|Q6L3S2_SOLDE Putative retrotransposon protein, identic... 59 6e-10 tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical O... 54 6e-10 tr|Q5NRP4|Q5NRP4_SOLDE Putative gag-pol polyprotein, identical O... 54 6e-10 tr|Q6L3S3|Q6L3S3_SOLDE Putative gag-pol polyprotein, identical O... 59 6e-10 tr|Q9XE85|Q9XE85_SORBI Polyprotein OS=Sorghum bicolor PE=4 SV=1 61 6e-10 tr|Q5NRP3|Q5NRP3_SOLDE Gag-pol polyprotein, putative OS=Solanum ... 54 6e-10 tr|Q6UUJ1|Q6UUJ1_ORYSJ Putative gag-pol polyprotein (Putative po... 52 7e-10 tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs... 52 1e-09 tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs... 52 1e-09 tr|Q6ATA5|Q6ATA5_ORYSJ Putative uncharacterized protein OSJNBa00... 52 1e-09 tr|Q0J0N1|Q0J0N1_ORYSJ Os09g0491900 protein OS=Oryza sativa subs... 52 1e-09 tr|Q5MG92|Q5MG92_IPOBA Putative retrotransposon polyprotein OS=I... 54 1e-09 tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum ... 54 2e-09 tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 53 2e-09 tr|Q75KD0|Q75KD0_ORYSJ Putative polyprotein (Retrotransposon pro... 57 2e-09 tr|A5ACP2|A5ACP2_VITVI Putative uncharacterized protein OS=Vitis... 60 2e-09 tr|Q25AH5|Q25AH5_ORYSA H0124E07.8 protein OS=Oryza sativa GN=H01... 60 3e-09 tr|A5BSE9|A5BSE9_VITVI Putative uncharacterized protein OS=Vitis... 59 3e-09 tr|Q2QTD9|Q2QTD9_ORYSJ Retrotransposon protein, putative, Ty3-gy... 58 4e-09
>tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris PE=4 SV=1 Length = 1501
Score = 62.0 bits (149), Expect(2) = 7e-11 Identities = 26/58 (44%), Positives = 40/58 (68%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 D +F + FW + NLG+T+ +AFHP ++GQTE TN T+ D+LRA A+D +W++ Sbjct: 1209 DSRFLSKFWKKVQANLGTTLKMSTAFHPATDGQTERTNQTMEDMLRACAIDFQGSWED 1266
Score = 27.7 bits (60), Expect(2) = 7e-11 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVYDKKLPVPM 26 +YNN+ H++ PFE +Y +K P+ Sbjct: 1274 SYNNSYHASIKMAPFEALYGRKCRSPI 1300
>tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus PE=4 SV=1 Length = 871
Score = 63.5 bits (153), Expect(2) = 7e-11 Identities = 27/59 (45%), Positives = 40/59 (67%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124 D +F +HFW +L LG+ +DF +AFHP+S+GQ+E T T+ D+LRA +D W +H Sbjct: 665 DTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSERTIQTLEDMLRACVIDFQGGWSQH 723
Score = 26.2 bits (56), Expect(2) = 7e-11 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVYDKKLPVPM 26 AYNN+ ++ PFE +Y +K P+ Sbjct: 730 AYNNSYQASIKMAPFEALYGRKCRSPL 756
>tr|Q6MWG4|Q6MWG4_ORYSJ B1160F02.12 protein OS=Oryza sativa subsp. japonica GN=B1160F02.12 PE=4 SV=1 Length = 713
Score = 67.8 bits (164), Expect = 3e-10 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = -1
Query: 294 QFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 QF +HFW L LGS +DF +AFHP++ GQTE N + D+LRAYA+D +WD+ Sbjct: 432 QFTSHFWQKLHYELGSYLDFSTAFHPQTGGQTERLNQRLEDMLRAYALDFAASWDK 487
>tr|Q25AL5|Q25AL5_ORYSA H0102C09.1 protein OS=Oryza sativa GN=H0102C09.1 PE=4 SV=1 Length = 1825
Score = 67.8 bits (164), Expect = 3e-10 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = -1
Query: 294 QFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 QF +HFW L LGS +DF +AFHP++ GQTE N + D+LRAYA+D +WD+ Sbjct: 1544 QFTSHFWQKLHYELGSYLDFSTAFHPQTGGQTERLNQRLEDMLRAYALDFAASWDK 1599
>tr|Q949K9|Q949K9_CICAR Putative polyprotein (Fragment) OS=Cicer arietinum GN=pol PE=4 SV=1 Length = 655
Score = 61.6 bits (148), Expect(2) = 3e-10 Identities = 27/57 (47%), Positives = 40/57 (70%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWD 130 D +F +HFW AL LG+ + SA+HP+++GQTE TN ++ DLLRA +D+ +WD Sbjct: 467 DPKFTSHFWGALHEALGTKLRLSSAYHPQTDGQTERTNQSLEDLLRACVLDDRGSWD 523
Score = 26.2 bits (56), Expect(2) = 3e-10 Identities = 8/26 (30%), Positives = 16/26 (61%) Frame = -3
Query: 103 YNNTPHSTTNKVPFEIVYDKKLPVPM 26 YNN+ H++ P++ +Y +K P+ Sbjct: 533 YNNSFHTSIGMAPYQALYGRKCQTPL 558
>tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0038J12.13 PE=4 SV=1 Length = 1619
Score = 53.5 bits (127), Expect(2) = 3e-10 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 D +F +HFW L LG+ + F + HP+++GQTE N T+ +LRA N W+E Sbjct: 1257 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEE 1314
Score = 33.9 bits (76), Expect(2) = 3e-10 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 AYN + HSTT K PFEIVY Sbjct: 1322 AYNRSQHSTTKKCPFEIVY 1340
>tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os03g35326 PE=4 SV=1 Length = 889
Score = 53.1 bits (126), Expect(2) = 3e-10 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 D +F +HFW L LG+ + F + HP+++GQTE N T+ +LRA N W+E Sbjct: 674 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 731
Score = 34.3 bits (77), Expect(2) = 3e-10 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 AYN++ HSTT K PFEIVY Sbjct: 739 AYNHSQHSTTKKCPFEIVY 757
>tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa GN=OSJNBa0045C13.1 PE=4 SV=1 Length = 1708
Score = 53.1 bits (126), Expect(2) = 4e-10 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 D +F +HFW L LG+ + F + HP+++GQTE N T+ +LRA N W+E Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418
Score = 33.9 bits (76), Expect(2) = 4e-10 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 AYN + HSTT K PFEIVY Sbjct: 1426 AYNRSQHSTTKKCPFEIVY 1444
>tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy subclass (Putative gag-pol polyprotein) OS=Oryza sativa subsp. japonica GN=OSJNBb0052C09.15 PE=4 SV=1 Length = 1708
Score = 53.1 bits (126), Expect(2) = 4e-10 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 D +F +HFW L LG+ + F + HP+++GQTE N T+ +LRA N W+E Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418
Score = 33.9 bits (76), Expect(2) = 4e-10 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 AYN + HSTT K PFEIVY Sbjct: 1426 AYNRSQHSTTKKCPFEIVY 1444
>tr|Q9SLQ0|Q9SLQ0_ORYSI Gag-pol polyprotein (Fragment) OS=Oryza sativa subsp. indica GN=gag-pol PE=4 SV=1 Length = 1587
Score = 53.1 bits (126), Expect(2) = 4e-10 Identities = 23/58 (39%), Positives = 34/58 (58%) Frame = -1
Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127 D +F +HFW L LG+ + F + HP+++GQTE N T+ +LRA N W+E Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418
Score = 33.9 bits (76), Expect(2) = 4e-10 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -3
Query: 106 AYNNTPHSTTNKVPFEIVY 50 AYN + HSTT K PFEIVY Sbjct: 1426 AYNRSQHSTTKKCPFEIVY 1444
|