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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913529
Clone id YMU001_000031_C04
Library
Length 342
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAGGAACATTACTAGTGATGGTGGTCATAGGGACAGGCAACTTCTTATCATAAACAATCT
CGAAGGGGACTTTGTTTGTGGTAGAGTGGGGAGTGTTGTTGTAAGCAATTGGAGGAGAGG
AAGGTGCTCGTCCCAATTTGTTGTATTGTCTACTGCGTAGGCCCTAAGGAGGTCAAGGAT
AGTACTATTGGTAGCTTCGGTCTGGCCATTACTTTTAGGGTGGAAAGCAGACATGAAGTC
CATTGTGGAGCCTAGGTTAGTGCACAGAGCATACCAAAAATGATTACAAAATTGACCATC
ACTATAAATAAAAAAAAAGTTTAGGAAAACCATGGTGAGGAA
■■Homology search results ■■ -
sp_hit_id Q9UR07
Definition sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe
Align length 60
Score (bit) 38.9
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913529|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_C04.
         (342 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot...    39   2e-05
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot...    39   2e-05
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot...    39   2e-05
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...    41   5e-05
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...    40   1e-04
sp|A4FUB7|GIN1_BOVIN Gypsy retrotransposon integrase-like protei...    32   0.75 
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha...    26   1.1  
sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus...    31   1.7  
sp|P03359|POL_WMSV Pol polyprotein (Fragment) OS=Woolly monkey s...    30   2.9  
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ...    30   2.9  
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr...    30   3.7  
sp|Q0S3D9|RL13_RHOSR 50S ribosomal protein L13 OS=Rhodococcus sp...    29   6.4  
sp|Q5RBK0|GIN1_PONAB Gypsy retrotransposon integrase-like protei...    29   8.3  
sp|Q8X8G9|YIHI_ECO57 UPF0241 protein yihI OS=Escherichia coli O1...    29   8.3  
sp|Q9Y468|LMBL1_HUMAN Lethal(3)malignant brain tumor-like protei...    29   8.3  

>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
          Length = 1333

 Score = 38.9 bits (89), Expect(2) = 2e-05
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 303  SDGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124
            +D  F +  W          M F   + P+++GQTE TN T+  LLR     +   W +H
Sbjct: 1051 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1110



 Score = 28.1 bits (61), Expect(2) = 2e-05
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVY 50
            +YNN  HS T   PFEIV+
Sbjct: 1117 SYNNAIHSATQMTPFEIVH 1135


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
          Length = 1333

 Score = 38.9 bits (89), Expect(2) = 2e-05
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 303  SDGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124
            +D  F +  W          M F   + P+++GQTE TN T+  LLR     +   W +H
Sbjct: 1051 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1110



 Score = 28.1 bits (61), Expect(2) = 2e-05
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVY 50
            +YNN  HS T   PFEIV+
Sbjct: 1117 SYNNAIHSATQMTPFEIVH 1135


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
            type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
          Length = 1333

 Score = 38.9 bits (89), Expect(2) = 2e-05
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -1

Query: 303  SDGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124
            +D  F +  W          M F   + P+++GQTE TN T+  LLR     +   W +H
Sbjct: 1051 NDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDH 1110



 Score = 28.1 bits (61), Expect(2) = 2e-05
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVY 50
            +YNN  HS T   PFEIV+
Sbjct: 1117 SYNNAIHSATQMTPFEIVH 1135


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score = 41.2 bits (95), Expect(2) = 5e-05
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = -1

Query: 267  LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNW 133
            L   LG      SA HP+++GQ+E T  T+  LLRAYA  N  NW
Sbjct: 1249 LTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNW 1293



 Score = 24.6 bits (52), Expect(2) = 5e-05
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 103  YNNTPHSTTNKVPFEI 56
            YN+TP  T  K PFEI
Sbjct: 1304 YNSTPTRTLGKSPFEI 1319


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
            OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score = 39.7 bits (91), Expect(2) = 1e-04
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = -1

Query: 267  LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNW 133
            L   LG      SA HP+++GQ+E T  T+  LLRAY   N  NW
Sbjct: 1275 LTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNW 1319



 Score = 24.6 bits (52), Expect(2) = 1e-04
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 103  YNNTPHSTTNKVPFEI 56
            YN+TP  T  K PFEI
Sbjct: 1330 YNSTPTRTLGKSPFEI 1345


>sp|A4FUB7|GIN1_BOVIN Gypsy retrotransposon integrase-like protein 1
           OS=Bos taurus GN=GIN1 PE=2 SV=1
          Length = 499

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
 Frame = -1

Query: 339 LTMVFLNFFFIYSDGQ---------FCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATN 187
           ++   +N FF+Y   Q         F +     LC   G T   + +   ++    E+T 
Sbjct: 163 ISKAIINIFFLYGPPQKIIMDQRDEFIHQINVELCELFG-TKQIVISHASQTINPAESTP 221

Query: 186 STILDLLRAYAVDNTTNWDEH 124
           STI   L  + VD   +WD+H
Sbjct: 222 STIKTFLSKHCVDYPNDWDDH 242


>sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6
            OS=Caenorhabditis elegans GN=K02A2.6 PE=2 SV=1
          Length = 1268

 Score = 26.2 bits (56), Expect(2) = 1.1
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -3

Query: 109  IAYNNTPHSTTN-KVPFEIVYDKKLPVPMTTI 17
            I+Y NTPHS  N   P E  + +K+   M+ +
Sbjct: 974  ISYRNTPHSALNGSTPAECHFGRKIRTTMSLL 1005



 Score = 24.6 bits (52), Expect(2) = 1.1
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -1

Query: 294  QFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTI 178
            Q  +H +  +C + G      + ++P+SNG  E    T+
Sbjct: 913  QLTSHLFAQMCQSHGIEHKTSAVYYPRSNGAAERFVDTL 951


>sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus
            GN=pol PE=1 SV=2
          Length = 1143

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 252  GSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNW 133
            G  ++F + +HP+S  + E  NS I  LL    V   T W
Sbjct: 954  GIHLEFSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTKW 993


>sp|P03359|POL_WMSV Pol polyprotein (Fragment) OS=Woolly monkey
           sarcoma virus GN=pol PE=3 SV=1
          Length = 294

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 267 LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVD 148
           L T LG       A+ P+S+GQ E  N TI + L   A++
Sbjct: 84  LATQLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLALE 123


>sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus
            GN=pol PE=3 SV=1
          Length = 1165

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 267  LCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVD 148
            L T LG       A+ P+S+GQ E  N TI + L   A++
Sbjct: 955  LATQLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLALE 994
tr_hit_id A2I5E5
Definition tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris
Align length 58
Score (bit) 62.0
E-value 7.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913529|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_C04.
         (342 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris ...    62   7e-11
tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus ...    64   7e-11
tr|Q6MWG4|Q6MWG4_ORYSJ B1160F02.12 protein OS=Oryza sativa subsp...    68   3e-10
tr|Q25AL5|Q25AL5_ORYSA H0102C09.1 protein OS=Oryza sativa GN=H01...    68   3e-10
tr|Q949K9|Q949K9_CICAR Putative polyprotein (Fragment) OS=Cicer ...    62   3e-10
tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sat...    54   3e-10
tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gy...    53   3e-10
tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa GN=...    53   4e-10
tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gy...    53   4e-10
tr|Q9SLQ0|Q9SLQ0_ORYSI Gag-pol polyprotein (Fragment) OS=Oryza s...    53   4e-10
tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1           63   4e-10
tr|Q6L3S2|Q6L3S2_SOLDE Putative retrotransposon protein, identic...    59   6e-10
tr|Q5NRP7|Q5NRP7_SOLDE Putative gag-pol polyprotein, identical O...    54   6e-10
tr|Q5NRP4|Q5NRP4_SOLDE Putative gag-pol polyprotein, identical O...    54   6e-10
tr|Q6L3S3|Q6L3S3_SOLDE Putative gag-pol polyprotein, identical O...    59   6e-10
tr|Q9XE85|Q9XE85_SORBI Polyprotein OS=Sorghum bicolor PE=4 SV=1        61   6e-10
tr|Q5NRP3|Q5NRP3_SOLDE Gag-pol polyprotein, putative OS=Solanum ...    54   6e-10
tr|Q6UUJ1|Q6UUJ1_ORYSJ Putative gag-pol polyprotein (Putative po...    52   7e-10
tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs...    52   1e-09
tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs...    52   1e-09
tr|Q6ATA5|Q6ATA5_ORYSJ Putative uncharacterized protein OSJNBa00...    52   1e-09
tr|Q0J0N1|Q0J0N1_ORYSJ Os09g0491900 protein OS=Oryza sativa subs...    52   1e-09
tr|Q5MG92|Q5MG92_IPOBA Putative retrotransposon polyprotein OS=I...    54   1e-09
tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum ...    54   2e-09
tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE...    53   2e-09
tr|Q75KD0|Q75KD0_ORYSJ Putative polyprotein (Retrotransposon pro...    57   2e-09
tr|A5ACP2|A5ACP2_VITVI Putative uncharacterized protein OS=Vitis...    60   2e-09
tr|Q25AH5|Q25AH5_ORYSA H0124E07.8 protein OS=Oryza sativa GN=H01...    60   3e-09
tr|A5BSE9|A5BSE9_VITVI Putative uncharacterized protein OS=Vitis...    59   3e-09
tr|Q2QTD9|Q2QTD9_ORYSJ Retrotransposon protein, putative, Ty3-gy...    58   4e-09

>tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris PE=4
            SV=1
          Length = 1501

 Score = 62.0 bits (149), Expect(2) = 7e-11
 Identities = 26/58 (44%), Positives = 40/58 (68%)
 Frame = -1

Query: 300  DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
            D +F + FW  +  NLG+T+   +AFHP ++GQTE TN T+ D+LRA A+D   +W++
Sbjct: 1209 DSRFLSKFWKKVQANLGTTLKMSTAFHPATDGQTERTNQTMEDMLRACAIDFQGSWED 1266



 Score = 27.7 bits (60), Expect(2) = 7e-11
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVYDKKLPVPM 26
            +YNN+ H++    PFE +Y +K   P+
Sbjct: 1274 SYNNSYHASIKMAPFEALYGRKCRSPI 1300


>tr|O64892|O64892_ANACO Polyprotein (Fragment) OS=Ananas comosus
           PE=4 SV=1
          Length = 871

 Score = 63.5 bits (153), Expect(2) = 7e-11
 Identities = 27/59 (45%), Positives = 40/59 (67%)
 Frame = -1

Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDEH 124
           D +F +HFW +L   LG+ +DF +AFHP+S+GQ+E T  T+ D+LRA  +D    W +H
Sbjct: 665 DTRFVSHFWRSLQDALGTRLDFSTAFHPQSDGQSERTIQTLEDMLRACVIDFQGGWSQH 723



 Score = 26.2 bits (56), Expect(2) = 7e-11
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 106 AYNNTPHSTTNKVPFEIVYDKKLPVPM 26
           AYNN+  ++    PFE +Y +K   P+
Sbjct: 730 AYNNSYQASIKMAPFEALYGRKCRSPL 756


>tr|Q6MWG4|Q6MWG4_ORYSJ B1160F02.12 protein OS=Oryza sativa subsp.
           japonica GN=B1160F02.12 PE=4 SV=1
          Length = 713

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -1

Query: 294 QFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
           QF +HFW  L   LGS +DF +AFHP++ GQTE  N  + D+LRAYA+D   +WD+
Sbjct: 432 QFTSHFWQKLHYELGSYLDFSTAFHPQTGGQTERLNQRLEDMLRAYALDFAASWDK 487


>tr|Q25AL5|Q25AL5_ORYSA H0102C09.1 protein OS=Oryza sativa
            GN=H0102C09.1 PE=4 SV=1
          Length = 1825

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = -1

Query: 294  QFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
            QF +HFW  L   LGS +DF +AFHP++ GQTE  N  + D+LRAYA+D   +WD+
Sbjct: 1544 QFTSHFWQKLHYELGSYLDFSTAFHPQTGGQTERLNQRLEDMLRAYALDFAASWDK 1599


>tr|Q949K9|Q949K9_CICAR Putative polyprotein (Fragment) OS=Cicer
           arietinum GN=pol PE=4 SV=1
          Length = 655

 Score = 61.6 bits (148), Expect(2) = 3e-10
 Identities = 27/57 (47%), Positives = 40/57 (70%)
 Frame = -1

Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWD 130
           D +F +HFW AL   LG+ +   SA+HP+++GQTE TN ++ DLLRA  +D+  +WD
Sbjct: 467 DPKFTSHFWGALHEALGTKLRLSSAYHPQTDGQTERTNQSLEDLLRACVLDDRGSWD 523



 Score = 26.2 bits (56), Expect(2) = 3e-10
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 103 YNNTPHSTTNKVPFEIVYDKKLPVPM 26
           YNN+ H++    P++ +Y +K   P+
Sbjct: 533 YNNSFHTSIGMAPYQALYGRKCQTPL 558


>tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa
            subsp. japonica GN=OSJNBa0038J12.13 PE=4 SV=1
          Length = 1619

 Score = 53.5 bits (127), Expect(2) = 3e-10
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = -1

Query: 300  DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
            D +F +HFW  L   LG+ + F +  HP+++GQTE  N T+  +LRA    N   W+E
Sbjct: 1257 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEE 1314



 Score = 33.9 bits (76), Expect(2) = 3e-10
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVY 50
            AYN + HSTT K PFEIVY
Sbjct: 1322 AYNRSQHSTTKKCPFEIVY 1340


>tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
           subclass OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g35326 PE=4 SV=1
          Length = 889

 Score = 53.1 bits (126), Expect(2) = 3e-10
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = -1

Query: 300 DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
           D +F +HFW  L   LG+ + F +  HP+++GQTE  N T+  +LRA    N   W+E
Sbjct: 674 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 731



 Score = 34.3 bits (77), Expect(2) = 3e-10
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = -3

Query: 106 AYNNTPHSTTNKVPFEIVY 50
           AYN++ HSTT K PFEIVY
Sbjct: 739 AYNHSQHSTTKKCPFEIVY 757


>tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa
            GN=OSJNBa0045C13.1 PE=4 SV=1
          Length = 1708

 Score = 53.1 bits (126), Expect(2) = 4e-10
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = -1

Query: 300  DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
            D +F +HFW  L   LG+ + F +  HP+++GQTE  N T+  +LRA    N   W+E
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418



 Score = 33.9 bits (76), Expect(2) = 4e-10
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVY 50
            AYN + HSTT K PFEIVY
Sbjct: 1426 AYNRSQHSTTKKCPFEIVY 1444


>tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
            subclass (Putative gag-pol polyprotein) OS=Oryza sativa
            subsp. japonica GN=OSJNBb0052C09.15 PE=4 SV=1
          Length = 1708

 Score = 53.1 bits (126), Expect(2) = 4e-10
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = -1

Query: 300  DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
            D +F +HFW  L   LG+ + F +  HP+++GQTE  N T+  +LRA    N   W+E
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418



 Score = 33.9 bits (76), Expect(2) = 4e-10
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVY 50
            AYN + HSTT K PFEIVY
Sbjct: 1426 AYNRSQHSTTKKCPFEIVY 1444


>tr|Q9SLQ0|Q9SLQ0_ORYSI Gag-pol polyprotein (Fragment) OS=Oryza sativa
            subsp. indica GN=gag-pol PE=4 SV=1
          Length = 1587

 Score = 53.1 bits (126), Expect(2) = 4e-10
 Identities = 23/58 (39%), Positives = 34/58 (58%)
 Frame = -1

Query: 300  DGQFCNHFWYALCTNLGSTMDFMSAFHPKSNGQTEATNSTILDLLRAYAVDNTTNWDE 127
            D +F +HFW  L   LG+ + F +  HP+++GQTE  N T+  +LRA    N   W+E
Sbjct: 1361 DTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEE 1418



 Score = 33.9 bits (76), Expect(2) = 4e-10
 Identities = 14/19 (73%), Positives = 15/19 (78%)
 Frame = -3

Query: 106  AYNNTPHSTTNKVPFEIVY 50
            AYN + HSTT K PFEIVY
Sbjct: 1426 AYNRSQHSTTKKCPFEIVY 1444