BP913534 |
Clone id |
YMU001_000031_C09 |
Library |
YMU01 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000031_C09. |
Accession |
BP913534 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3971Contig1 |
Sequence |
CCTGTCTTCCTTGTAACATGAAGGCTCATTGCAATCAGTCAACATGACATAGTTCATAGA TGCAACAAACCTATCAGGAGGTCGCGTGATACGTCCAGATCTACGCACAACAGGTGGCTC AGGCTCACCCACAACCTGTGGTTCCAATCTATCCTGTCCTTGCTCCTCTTGAGCCCTGAC ATTTTGTCTTGCACGTGCAGGTCCATCTTCTTGGAAGACAACTCTTCTAATCTCCTCAAC CCTCTCTGGTTTAGAATGATATTTGGATTCATTAAAGTGAACATCACTGCTGCGGATAAC CTTTCTGGATTCGGGATCCCAAAGTCTGTACCCCATCTCACCAGAATTACCATAGCCTAG AAAGATGCACTTTCTACTCTTTGTCTCAAGTTTGTTCCTAAATTCCTTTGGAACGTGAGT ATATGCCTCACAGCCAAAGACTCTGAGATGCTTGTATGAGGGCATTTTGCCTGACCATAC CATCTCTGACACTGAATCCTTCTGCAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P10978 |
Definition |
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum |
Align length |
186 |
Score (bit) |
109.0 |
E-value |
7.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5AVU6 |
Definition |
tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
165 |
Score (bit) |
119.0 |
E-value |
6.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913534|Adiantum capillus-veneris mRNA, clone: YMU001_000031_C09. (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis... 119 6e-26 tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis... 118 1e-25 tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis... 118 2e-25 tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis... 118 2e-25 tr|A5B5N4|A5B5N4_VITVI Putative uncharacterized protein OS=Vitis... 118 2e-25 tr|A5BK92|A5BK92_VITVI Putative uncharacterized protein OS=Vitis... 117 3e-25 tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis... 117 3e-25 tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis... 117 4e-25 tr|A5BD56|A5BD56_VITVI Putative uncharacterized protein OS=Vitis... 116 5e-25 tr|A5AMG2|A5AMG2_VITVI Putative uncharacterized protein OS=Vitis... 116 5e-25 tr|A5BIC7|A5BIC7_VITVI Putative uncharacterized protein OS=Vitis... 115 9e-25 tr|A5BJ32|A5BJ32_VITVI Putative uncharacterized protein OS=Vitis... 115 2e-24 tr|A5B1S3|A5B1S3_VITVI Putative uncharacterized protein OS=Vitis... 115 2e-24 tr|A5AQV5|A5AQV5_VITVI Putative uncharacterized protein OS=Vitis... 114 4e-24 tr|A5B6M5|A5B6M5_VITVI Putative uncharacterized protein OS=Vitis... 113 5e-24 tr|A5ARK1|A5ARK1_VITVI Putative uncharacterized protein OS=Vitis... 113 5e-24 tr|A5BJQ3|A5BJQ3_VITVI Putative uncharacterized protein OS=Vitis... 113 6e-24 tr|A5BFU1|A5BFU1_VITVI Putative uncharacterized protein OS=Vitis... 112 8e-24 tr|A5BBW7|A5BBW7_VITVI Putative uncharacterized protein OS=Vitis... 111 2e-23 tr|A5B0E4|A5B0E4_VITVI Putative uncharacterized protein OS=Vitis... 110 3e-23 tr|A5BA89|A5BA89_VITVI Putative uncharacterized protein OS=Vitis... 110 5e-23 tr|A5C9A6|A5C9A6_VITVI Putative uncharacterized protein OS=Vitis... 109 9e-23 tr|A5BGX3|A5BGX3_VITVI Putative uncharacterized protein OS=Vitis... 108 1e-22 tr|A5BM25|A5BM25_VITVI Putative uncharacterized protein OS=Vitis... 108 1e-22 tr|A5B377|A5B377_VITVI Putative uncharacterized protein OS=Vitis... 107 3e-22 tr|A5B0V5|A5B0V5_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22 tr|A5B2G6|A5B2G6_VITVI Putative uncharacterized protein OS=Vitis... 106 7e-22 tr|Q6RZV5|Q6RZV5_MUSAC Retrotransposon-like protein OS=Musa acum... 105 1e-21 tr|A5AK46|A5AK46_VITVI Putative uncharacterized protein OS=Vitis... 105 1e-21 tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis... 105 2e-21
>tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024659 PE=4 SV=1 Length = 1287
Score = 119 bits (299), Expect = 6e-26 Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 609 EEVWSGKEVKFSHLKVFGCISYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 667
Query: 306 RKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDG----PARARQNVRAQEEQGQDRLX 142 RK+IRS +V FNE Y + V ++ + ++ + V+ E+ ++ + Sbjct: 668 RKIIRSRNVIFNEQVMYKDRSSVVSDVTEIDQKKSEFVNLDELTKSTVQKGGEEDKENVN 727
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 728 SQVDLSTPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 772
>tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035336 PE=4 SV=1 Length = 1244
Score = 118 bits (296), Expect = 1e-25 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 572 EEVWSGKEVKFSHLKVFGCXSYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 630
Query: 306 RKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQNVRAQEEQGQDRLX 142 RK+IRS +V FNE + V + Q+ V+ E+ ++ + Sbjct: 631 RKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVN 690
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 691 SQVDLSTPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 735
>tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001479 PE=4 SV=1 Length = 1246
Score = 118 bits (295), Expect = 2e-25 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 598 EEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 656
Query: 306 RKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQNVRAQEEQGQDRLX 142 RK+IRS +V FNE + V + Q+ V+ E+ ++ + Sbjct: 657 RKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVN 716
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 717 SQVDLSTPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 761
>tr|A5C6L3|A5C6L3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040966 PE=4 SV=1 Length = 1212
Score = 118 bits (295), Expect = 2e-25 Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 552 EEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 610
Query: 306 RKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQNVRAQEEQGQDRLX 142 RK+IRS +V FNE + V + Q+ V+ E+ ++ + Sbjct: 611 RKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVN 670
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 671 SQVDLSTPXVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 715
>tr|A5B5N4|A5B5N4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005765 PE=4 SV=1 Length = 1261
Score = 118 bits (295), Expect = 2e-25 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 589 EEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 647
Query: 306 RKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQNVRAQEEQGQDRLX 142 RK+IRS +V FNE + V + Q+ V+ E+ ++ + Sbjct: 648 RKIIRSRNVIFNEQVMYKDRSTVTSDVTEIDQKKSEFVNLDELTESTVQKGGEEDKENVN 707
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 708 SQVDLSTPIVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 752
>tr|A5BK92|A5BK92_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023139 PE=4 SV=1 Length = 1222
Score = 117 bits (293), Expect = 3e-25 Identities = 64/160 (40%), Positives = 90/160 (56%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 576 EEVWSGKEVKFSHLKVFGCXSYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 634
Query: 306 RKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDGPARARQNVRAQEEQGQDRLXXXXXX 127 RK+IRS +V FNE + K V++ G ++NV +Q + Sbjct: 635 RKIIRSRNVIFNEQVMY-KDSTVQK---------GGEEDKENVNSQVD-----------L 673
Query: 126 XXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R TRPP R+ +NY++LTD EP CY E Sbjct: 674 STPVVEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDE 713
>tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037436 PE=4 SV=1 Length = 1183
Score = 117 bits (293), Expect = 3e-25 Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 576 EEVWSGKEVKFSHLKVFGCISYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 634
Query: 306 RKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDG----PARARQNVRAQEEQGQDRLX 142 RK+IRS +V FNE Y + V ++ + ++ + V+ E+ ++ + Sbjct: 635 RKIIRSRNVIFNEQVMYKDRSSVVSDVTEIDQKKSEFVNLDELTKSTVQKGGEEDKENVN 694
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R RPP R+ +NY++LTD EP CY E Sbjct: 695 SQVDLSTPVVEVRRSSRNXRPPQRYSPVLNYLLLTDGGEPECYDE 739
>tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032634 PE=4 SV=1 Length = 1298
Score = 117 bits (292), Expect = 4e-25 Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 626 EEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 684
Query: 306 RKVIRSSDVHFNESKYHSKPERVEEIRRVVFQEDG-----PARARQNVRAQEEQGQDRLX 142 RK+IRS +V FNE + V + Q+ V+ + E+ ++ + Sbjct: 685 RKIIRSRNVIFNEQVMYKDRLTVTSXVTEIDQKKSEFVNLDELTESTVQKRGEEDKENVN 744
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R RPP R+ +NY++LTD EP CY E Sbjct: 745 SKVDLRTPVVEVRRSSRNIRPPQRYSPVLNYLLLTDGGEPECYNE 789
>tr|A5BD56|A5BD56_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028342 PE=4 SV=1 Length = 1252
Score = 116 bits (291), Expect = 5e-25 Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG+ + GYR WD ++ Sbjct: 397 EEVWSGKEMKFSHLKVFGCVSYVHIDSDARSKLDAKSKICFFIGYGDE-KFGYRFWDEQN 455
Query: 306 RKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDGPARARQNVRAQEEQG----QDRLX 142 RK+IRS +V FNE Y + V ++ + ++ + + + ++G ++ + Sbjct: 456 RKIIRSRNVIFNEQVMYKDRSTVVSDVTEIDQKKSEFVKLDELTESTVQKGGKEDKENVN 515
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 VRRS R RPP R+ +NY++LTD EP CY E Sbjct: 516 SQVDLSTPIAEVRRSSRNIRPPKRYSPGLNYLLLTDGGEPECYDE 560
>tr|A5AMG2|A5AMG2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018063 PE=4 SV=1 Length = 1294
Score = 116 bits (291), Expect = 5e-25 Identities = 59/165 (35%), Positives = 92/165 (55%), Gaps = 5/165 (3%) Frame = -3
Query: 486 EMVWSGKMPSYKHLRVFGCEAYTHVPKEFRNKLETKSRKCIFLGYGNSGEMGYRLWDPES 307 E VWSGK + HL+VFGC +Y H+ + R+KL+ KS+ C F+GYG + + GYR WD ++ Sbjct: 559 EEVWSGKEVKFSHLKVFGCISYVHIDFDSRSKLDAKSKICFFIGYGGNEKFGYRFWDEQN 618
Query: 306 RKVIRSSDVHFNES-KYHSKPERVEEIRRVVFQEDGPARARQNVRAQEEQG----QDRLX 142 RK+IRS +V FNE Y + V ++ + ++ + + + ++G ++ + Sbjct: 619 RKIIRSRNVIFNEQVMYKYRSSIVSDVTEIDQKKSEFVNLDELIESTVQKGGEEDKENVN 678
Query: 141 XXXXXXXXXXXVRRSGRITRPPDRFVASMNYVMLTDCNEPSCYKE 7 V RS R RPP R+ +NY++LTD EP CY E Sbjct: 679 SQVNLSTPVVEVHRSSRNIRPPQRYSPVLNYLLLTDGGEPECYDE 723
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