BP913541
Clone id YMU001_000031_D04
Library
Length 316
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAAAAATCAATCAAAGTGCCACAATATAAAAATCTTAAGTTGAAAGAGAAATCTCAGCTT
GATTTGGTACTCCACTCACATGTATCGCCTATGGTACTAGAGCCCTATAGGTTCCCAGTG
TGGGCGCTTTTCCTTGAAAATCAAAAAACCCAAGGCATACAAAATAAGCACACACATCAA
AATTGAAACAATGTGAAAAGACTTCGGGGGGTCAAAGAAAAGGTAATCAGTCAAGCGATG
ATTTCATGAAAAATTCTTTTTATCGTAGCTTAACTACAAGGTCTTCTAGGTATAGCCTCT
AGTCAACCCTCGAACA
■■Homology search results ■■ -
sp_hit_id Q7A0P4
Definition sp|Q7A0P4|SYV_STAAW Valyl-tRNA synthetase OS=Staphylococcus aureus (strain MW2)
Align length 58
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913541|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_D04.
(316 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7A0P4|SYV_STAAW Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|A8Z2I4|SYV_STAAT Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|Q6G8R2|SYV_STAAS Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|Q99TJ8|SYV_STAAN Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|A6QHJ8|SYV_STAAE Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|Q5HFA8|SYV_STAAC Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|A5ITI8|SYV_STAA9 Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|Q2FXR8|SYV_STAA8 Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|Q2FG72|SYV_STAA3 Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|A6U2D1|SYV_STAA2 Valyl-tRNA synthetase OS=Staphylococcus aure... 29 6.3
sp|Q931Q1|SYV_STAAM Valyl-tRNA synthetase OS=Staphylococcus aure... 29 8.3
sp|A7X383|SYV_STAA1 Valyl-tRNA synthetase OS=Staphylococcus aure... 29 8.3

>sp|Q7A0P4|SYV_STAAW Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain MW2) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|A8Z2I4|SYV_STAAT Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|Q6G8R2|SYV_STAAS Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain MSSA476) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|Q99TJ8|SYV_STAAN Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain N315) GN=valS PE=1 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|A6QHJ8|SYV_STAAE Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain Newman) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|Q5HFA8|SYV_STAAC Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain COL) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|A5ITI8|SYV_STAA9 Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain JH9) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|Q2FXR8|SYV_STAA8 Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain NCTC 8325) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|Q2FG72|SYV_STAA3 Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain USA300) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


>sp|A6U2D1|SYV_STAA2 Valyl-tRNA synthetase OS=Staphylococcus aureus
(strain JH1) GN=valS PE=3 SV=1
Length = 876

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1

Query: 1 KKSIKVPQYKNLKLKEKSQLDLVLHSHVSPMVLEPYRFPVWALFLENQKTQGIQNKHT 174
K+ +K + ++L +K + + V HS S V+EPY W + +E+ + + N+ T
Sbjct: 319 KQLVKDLKEQDLVIKIEDHVHSVGHSERSGAVVEPYLSTQWFVRMEDLAKRSLDNQKT 376


tr_hit_id A4MZU2
Definition tr|A4MZU2|A4MZU2_HAEIN Putative uncharacterized protein OS=Haemophilus influenzae 22.1-21
Align length 34
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913541|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_D04.
(316 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4MZU2|A4MZU2_HAEIN Putative uncharacterized protein OS=Haemo... 34 4.2

>tr|A4MZU2|A4MZU2_HAEIN Putative uncharacterized protein
OS=Haemophilus influenzae 22.1-21 GN=CGSHi22121_08173
PE=4 SV=1
Length = 63

Score = 33.9 bits (76), Expect = 4.2
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -2

Query: 225 YLFFDPPKSFHIVSILMCVLILYALGFLIFKEKR 124
+ FD P F I+ +L L+L LGFL ++EKR
Sbjct: 18 HFIFDKPMIFRIILLLFKDLVLSLLGFLFYREKR 51