BP913543 |
Clone id |
YMU001_000031_D06 |
Library |
YMU01 |
Length |
507 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000031_D06. |
Accession |
BP913543 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4150Contig1 |
Sequence |
CAAACACAATGTAATTAGGTATATTTGTTAAAAGCTGGGCTGGGAAGACTCAATGACAAC ACCAAAACACATGTATCAAGTTAGCTCCCTGTCAACATGATGGCCATGATTTGAATGAAG AGCCAATTGTTTACAAGGGAAAGGTCTGATGCCCTCAAACAGCTAGTGCTGCAATATCAG TATTCAGGGATTTGAGAAAAAGTATACCCATTCGCCCCTCGCATTGAATAGTAAGCAATT CGAGTTTTATAAAAACCTGGAATGAAGACAAGAAGTCCGATGGTAAGGAAGCCATAAACC TGCGTGGAGTCGCCACCCATGTGGCCAGAGAAGATGAGGTAGGAGAACACCAGGCACAGC GTGCCACAGGAAAGTAAGAAGATGGCAAGCGCAATGGACTTCCAGCGGGACGCGGTTGAA GGGATCGTATTTGTAACGTAGATCGTCCTCCAGTCTATGCCGTCGATCTGCACGCTGATG CGGCTGCTGCTCCGTCGACAGCGCCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5ZLH4 |
Definition |
sp|Q5ZLH4|CT030_CHICK UPF0414 transmembrane protein C20orf30 homolog OS=Gallus gallus |
Align length |
76 |
Score (bit) |
69.3 |
E-value |
1.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913543|Adiantum capillus-veneris mRNA, clone: YMU001_000031_D06. (507 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q5ZLH4|CT030_CHICK UPF0414 transmembrane protein C20orf30 hom... 69 1e-11 sp|Q5BJP5|CT030_RAT UPF0414 transmembrane protein C20orf30 homol... 69 2e-11 sp|Q8CIB6|CT030_MOUSE UPF0414 transmembrane protein C20orf30 hom... 69 2e-11 sp|Q96A57|CT030_HUMAN UPF0414 transmembrane protein C20orf30 OS=... 67 6e-11 sp|Q5R8X3|CT030_PONAB UPF0414 transmembrane protein C20orf30 hom... 66 1e-10 sp|Q5E975|CT030_BOVIN UPF0414 transmembrane protein C20orf30 hom... 65 1e-10 sp|Q8IXJ9|ASXL1_HUMAN Putative Polycomb group protein ASXL1 OS=H... 33 1.00 sp|Q5T1R4|ZEP3_HUMAN Transcription factor HIVEP3 OS=Homo sapiens... 32 1.3 sp|Q8H5X5|SCAM1_ORYSJ Secretory carrier-associated membrane prot... 31 2.9 sp|A2YMP7|SCAM1_ORYSI Putative secretory carrier-associated memb... 31 2.9 sp|Q8R0J4|TM134_MOUSE Transmembrane protein 134 OS=Mus musculus ... 31 3.8 sp|A0B7B7|SYL_METTP Leucyl-tRNA synthetase OS=Methanosaeta therm... 30 6.6 sp|Q2Y9Y7|BIOH_NITMU Carboxylesterase bioH OS=Nitrosospira multi... 30 6.6 sp|Q869N9|IF2A_DICDI Eukaryotic translation initiation factor 2 ... 30 8.4
>sp|Q5ZLH4|CT030_CHICK UPF0414 transmembrane protein C20orf30 homolog OS=Gallus gallus GN=RCJMB04_6c24 PE=2 SV=1 Length = 120
Score = 69.3 bits (168), Expect = 1e-11 Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 1/76 (1%) Frame = -2
Query: 404 WKSIALAIFLLSCGTLCLVFSYLIFSGHMG-GDSTQVYGFLTIGLLVFIPGFYKTRIAYY 228 +K+IALA+ L GT ++ L+ +G++ G + + L IG+LVF+PGFY RIAYY Sbjct: 43 YKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVLIIGILVFLPGFYHLRIAYY 102
Query: 227 SMRGANGYTFSQIPEY 180 + +G GY++ IP++ Sbjct: 103 ASKGYRGYSYDDIPDF 118
>sp|Q5BJP5|CT030_RAT UPF0414 transmembrane protein C20orf30 homolog OS=Rattus norvegicus PE=2 SV=1 Length = 120
Score = 68.6 bits (166), Expect = 2e-11 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%) Frame = -2
Query: 404 WKSIALAIFLLSCGTLCLVFSYLIFSGHMG-GDSTQVYGFLTIGLLVFIPGFYKTRIAYY 228 +K+IALA L GT ++ L+ SG++ G + + L IG+LVF+PGFY RIAYY Sbjct: 43 YKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYY 102
Query: 227 SMRGANGYTFSQIPEY 180 + +G GY++ IP++ Sbjct: 103 ASKGYRGYSYDDIPDF 118
>sp|Q8CIB6|CT030_MOUSE UPF0414 transmembrane protein C20orf30 homolog OS=Mus musculus PE=1 SV=1 Length = 120
Score = 68.6 bits (166), Expect = 2e-11 Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%) Frame = -2
Query: 404 WKSIALAIFLLSCGTLCLVFSYLIFSGHMG-GDSTQVYGFLTIGLLVFIPGFYKTRIAYY 228 +K+IALA L GT ++ L+ SG++ G + + L IG+LVF+PGFY RIAYY Sbjct: 43 YKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYY 102
Query: 227 SMRGANGYTFSQIPEY 180 + +G GY++ IP++ Sbjct: 103 ASKGYRGYSYDDIPDF 118
>sp|Q96A57|CT030_HUMAN UPF0414 transmembrane protein C20orf30 OS=Homo sapiens GN=C20orf30 PE=2 SV=1 Length = 120
Score = 66.6 bits (161), Expect = 6e-11 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%) Frame = -2
Query: 404 WKSIALAIFLLSCGTLCLVFSYLIFSGHMG-GDSTQVYGFLTIGLLVFIPGFYKTRIAYY 228 +K+IALA L G ++ L+ SG++ G + + L IG+LVF+PGFY RIAYY Sbjct: 43 YKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYY 102
Query: 227 SMRGANGYTFSQIPEY 180 + +G GY++ IP++ Sbjct: 103 ASKGYRGYSYDDIPDF 118
>sp|Q5R8X3|CT030_PONAB UPF0414 transmembrane protein C20orf30 homolog OS=Pongo abelii PE=2 SV=1 Length = 120
Score = 65.9 bits (159), Expect = 1e-10 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%) Frame = -2
Query: 404 WKSIALAIFLLSCGTLCLVFSYLIFSGHMG-GDSTQVYGFLTIGLLVFIPGFYKTRIAYY 228 +K+IALA L G ++ L+ SG++ G + + L IG+LVF+PGFY RIAYY Sbjct: 43 YKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVLIIGILVFLPGFYHLRIAYY 102
Query: 227 SMRGANGYTFSQIPEY 180 + +G GY++ IP++ Sbjct: 103 ASKGYRGYSYDDIPDF 118
>sp|Q5E975|CT030_BOVIN UPF0414 transmembrane protein C20orf30 homolog OS=Bos taurus PE=2 SV=1 Length = 120
Score = 65.5 bits (158), Expect = 1e-10 Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%) Frame = -2
Query: 404 WKSIALAIFLLSCGTLCLVFSYLIFSGHMG-GDSTQVYGFLTIGLLVFIPGFYKTRIAYY 228 +K+IALA L G ++ L+ +G++ G + + L IG+LVF+PGFY RIAYY Sbjct: 43 YKAIALATVLFLIGAFLIIIGSLLLAGYISKGGADRAVPVLIIGILVFLPGFYHLRIAYY 102
Query: 227 SMRGANGYTFSQIPEY 180 + +G GY++ IP++ Sbjct: 103 ASKGYRGYSYDDIPDF 118
>sp|Q8IXJ9|ASXL1_HUMAN Putative Polycomb group protein ASXL1 OS=Homo sapiens GN=ASXL1 PE=1 SV=2 Length = 1541
Score = 32.7 bits (73), Expect = 1.00 Identities = 19/52 (36%), Positives = 28/52 (53%) Frame = -3
Query: 418 QPRPAGSPLRLPSSYFPVARCAWCSPTSSSLATWVATPRRFMASLPSDFLSS 263 +PRPA P+ LP+ PV P+++S++ V TPR A P F+ S Sbjct: 1316 RPRPA-DPMPLPAEIPPVFPSGKLGPSTNSMSGGVQTPREDWAPKPHAFVGS 1366
>sp|Q5T1R4|ZEP3_HUMAN Transcription factor HIVEP3 OS=Homo sapiens GN=HIVEP3 PE=1 SV=1 Length = 2406
Score = 32.3 bits (72), Expect = 1.3 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -3
Query: 436 LQIRSLQPRPAGSPLRLPSSYFPVARCAWCSPTSSSLATWVATP--RRFMASLPSD 275 L + L P PA P R P S+ P+ PTSS+L++ P +F LP D Sbjct: 1203 LHLPQLMPHPANIPFRQPPSFLPMP-----YPTSSALSSGFFLPLQSQFALQLPGD 1253
>sp|Q8H5X5|SCAM1_ORYSJ Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1 Length = 306
Score = 31.2 bits (69), Expect = 2.9 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Frame = -2
Query: 437 VTNTIPSTASRWKSIALAIFL-LSCGTLCLVFSYL-IFSGHMGGDSTQVYGFLTIGLLVF 264 +TN IPS R + +A A FL L+C CL ++ + + S + G+ +++ I + Sbjct: 129 ITNEIPSHLQRMQYVAFASFLGLAC---CLFWNVIAVTSAWVKGEGVKIWLLAIIYFISG 185
Query: 263 IPGFYKT--RIAYYSMRGANGYTF 198 +PG Y R Y +MR + F Sbjct: 186 VPGAYVLWYRPLYNAMRTDSALKF 209
>sp|A2YMP7|SCAM1_ORYSI Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1 Length = 306
Score = 31.2 bits (69), Expect = 2.9 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%) Frame = -2
Query: 437 VTNTIPSTASRWKSIALAIFL-LSCGTLCLVFSYL-IFSGHMGGDSTQVYGFLTIGLLVF 264 +TN IPS R + +A A FL L+C CL ++ + + S + G+ +++ I + Sbjct: 129 ITNEIPSHLQRMQYVAFASFLGLAC---CLFWNVIAVTSAWVKGEGVKIWLLAIIYFISG 185
Query: 263 IPGFYKT--RIAYYSMRGANGYTF 198 +PG Y R Y +MR + F Sbjct: 186 VPGAYVLWYRPLYNAMRTDSALKF 209
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8BIW9 |
Definition |
tr|B8BIW9|B8BIW9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica |
Align length |
95 |
Score (bit) |
111.0 |
E-value |
2.0e-23 |
Report |
|