BP913568 |
Clone id |
YMU001_000031_F12 |
Library |
YMU01 |
Length |
579 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000031_F12. |
Accession |
BP913568 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGGTACTCAAGAATTCGCGGTGTAAGAGGAAGGTATAAGCGATTCGCTTATTGGCATTTG TCGTTGAGGTTTCCTGTGGTAGCTTGAGTTGACTGGCAGATTTTCTTTGCAAGGAGTAGT TGTAAATCTATCGCTCTTTGTTTGATTGTTTTCCACTGGTTTTGAATTGGCGTATGTGGA TCCTTTGAAGTCGATATTGTCGTATATTTTGTTGCATTTTCTGGTGGAACATTCTTTCTT TCTCCTTTGATGACTTGGGTCTTATAGATCCTTGTAGTTTTTGTTGTTGATTCTGTTTGT TTCCTCGTGCTGGTTGAATGATGTGGCTTGATATTGACAGTTGTAGATAACTGGTCAATG GTCATCTTTGGCCTCCCTTCTTGTGTTGTTGGCCCGTTTTGAATTGGTAATTTTGGCCGC CATACCAATATAGTCTGTTGCGTAATCGAGCTATTGACTTTGGTTCTTTGAAGTTTTGCT GGCTTTTGGTGTTTTGTCTATTCTTCTGCCCCCTTTTTTATAGGAATTAGGTTGTCCTGC CTTATCCAAACTTTGTGTCCTCTTTTGATGTAATTGTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54VY3 |
Definition |
sp|Q54VY3|Y6355_DICDI Putative uncharacterized protein DDB_G0280065 OS=Dictyostelium discoideum |
Align length |
150 |
Score (bit) |
35.8 |
E-value |
0.15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9FYB1 |
Definition |
tr|Q9FYB1|Q9FYB1_ARATH Splicing factor SC35 OS=Arabidopsis thaliana |
Align length |
170 |
Score (bit) |
42.0 |
E-value |
0.023 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913568|Adiantum capillus-veneris mRNA, clone: YMU001_000031_F12. (562 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9FYB1|Q9FYB1_ARATH Splicing factor SC35 OS=Arabidopsis thali... 42 0.023 tr|Q9FMG4|Q9FMG4_ARATH Similarity to splicing factor (At5g64200/... 42 0.023 tr|Q8IAP1|Q8IAP1_PLAF7 Putative uncharacterized protein MAL8P1.1... 38 0.43 tr|Q4YTK5|Q4YTK5_PLABE Putative uncharacterized protein (Fragmen... 37 0.57 tr|Q23DR6|Q23DR6_TETTH Putative uncharacterized protein OS=Tetra... 37 0.74 tr|Q86JH8|Q86JH8_DICDI Putative uncharacterized protein OS=Dicty... 37 0.97 tr|Q55AX2|Q55AX2_DICDI SAM domain-containing protein OS=Dictyost... 37 0.97 tr|B3L074|B3L074_PLAKH Exported serine/threonine protein kinase,... 37 0.97 tr|B0W301|B0W301_CULQU Predicted protein OS=Culex quinquefasciat... 35 2.1 tr|Q8I3H0|Q8I3H0_PLAF7 Putative uncharacterized protein PFE1485w... 35 2.2 tr|Q54RW5|Q54RW5_DICDI RNA-binding region-containing protein (RN... 35 2.2 tr|A8XQN5|A8XQN5_CAEBR Putative uncharacterized protein OS=Caeno... 35 2.2 tr|Q183F0|Q183F0_CLOD6 Putative surface protein OS=Clostridium d... 35 2.8 tr|Q7R9Q2|Q7R9Q2_PLAYO Putative uncharacterized protein PY06809 ... 35 2.8 tr|Q54T41|Q54T41_DICDI Putative uncharacterized protein OS=Dicty... 35 2.8 tr|Q4YAG7|Q4YAG7_PLABE Putative uncharacterized protein OS=Plasm... 35 2.8 tr|Q4YTZ4|Q4YTZ4_PLABE Putative uncharacterized protein (Fragmen... 35 3.7 tr|Q4XSF3|Q4XSF3_PLACH Putative uncharacterized protein OS=Plasm... 35 3.7 tr|A7EEL7|A7EEL7_SCLS1 Predicted protein OS=Sclerotinia scleroti... 34 4.7 tr|Q4RS43|Q4RS43_TETNG Chromosome 7 SCAF15001, whole genome shot... 34 4.8 tr|Q8IBK4|Q8IBK4_PLAF7 Putative uncharacterized protein MAL7P1.1... 34 4.8 tr|Q86H58|Q86H58_DICDI Putative uncharacterized protein OS=Dicty... 34 4.8 tr|Q7RLT6|Q7RLT6_PLAYO Putative uncharacterized protein PY02454 ... 34 4.8 tr|Q24IL0|Q24IL0_TETTH Putative uncharacterized protein OS=Tetra... 34 4.8 tr|A0CGW0|A0CGW0_PARTE Chromosome undetermined scaffold_18, whol... 34 4.8 tr|B0DY31|B0DY31_LACBS Predicted protein OS=Laccaria bicolor (st... 34 4.8 tr|Q8I5T8|Q8I5T8_PLAF7 Putative uncharacterized protein OS=Plasm... 34 6.3 tr|Q8I5E6|Q8I5E6_PLAF7 Putative uncharacterized protein OS=Plasm... 34 6.3 tr|Q4XPP4|Q4XPP4_PLACH Putative uncharacterized protein OS=Plasm... 34 6.3 tr|Q22YA2|Q22YA2_TETTH Putative uncharacterized protein OS=Tetra... 34 6.3
>tr|Q9FYB1|Q9FYB1_ARATH Splicing factor SC35 OS=Arabidopsis thaliana GN=sc35 PE=1 SV=1 Length = 303
Score = 42.0 bits (97), Expect = 0.023 Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 8/170 (4%) Frame = -2
Query: 531 PNSYKKGGRRIDKTPKASKTSKNQSQ*LDYATDYIGMAAKITNSKRANNTRREAKDDH*P 352 PN+ K R+ + P S+ S+++S + + + +R+ + RR ++DD+ Sbjct: 96 PNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYRE 155
Query: 351 VIYNCQYQATSFNQ---HEETNRINNKNYKDL*DPSHQRRKKECST-----RKCNKIYDN 196 Y + ++ S+++ HEE +R H+RR + S R+ YDN Sbjct: 156 KDYRKRSRSRSYDRRERHEEKDR------------DHRRRTRSRSASPDEKRRVRGRYDN 203
Query: 195 IDFKGSTYANSKPVENNQTKSDRFTTTPCKENLPVNSSYHRKPQRQMPIS 46 S ++ P + S T+P +E P S R P + +S Sbjct: 204 ESRSHSRSLSASPARRSPRSSSPQKTSPAREVSPDKRSNERSPSPRRSLS 253
>tr|Q9FMG4|Q9FMG4_ARATH Similarity to splicing factor (At5g64200/MSJ1_4) (Putative uncharacterized protein At5g64200) OS=Arabidopsis thaliana GN=At5g64200 PE=1 SV=1 Length = 303
Score = 42.0 bits (97), Expect = 0.023 Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 8/170 (4%) Frame = -2
Query: 531 PNSYKKGGRRIDKTPKASKTSKNQSQ*LDYATDYIGMAAKITNSKRANNTRREAKDDH*P 352 PN+ K R+ + P S+ S+++S + + + +R+ + RR ++DD+ Sbjct: 96 PNAEKISKGRVVEPPPKSRRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYRE 155
Query: 351 VIYNCQYQATSFNQ---HEETNRINNKNYKDL*DPSHQRRKKECST-----RKCNKIYDN 196 Y + ++ S+++ HEE +R H+RR + S R+ YDN Sbjct: 156 KDYRKRSRSRSYDRRERHEEKDR------------DHRRRTRSRSASPDEKRRVRGRYDN 203
Query: 195 IDFKGSTYANSKPVENNQTKSDRFTTTPCKENLPVNSSYHRKPQRQMPIS 46 S ++ P + S T+P +E P S R P + +S Sbjct: 204 ESRSHSRSLSASPARRSPRSSSPQKTSPAREVSPDKRSNERSPSPRRSLS 253
>tr|Q8IAP1|Q8IAP1_PLAF7 Putative uncharacterized protein MAL8P1.139 OS=Plasmodium falciparum (isolate 3D7) GN=MAL8P1.139 PE=4 SV=1 Length = 5910
Score = 37.7 bits (86), Expect = 0.43 Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 16/123 (13%) Frame = -2
Query: 447 DYATD----YIGMAAKITNSKRANNTRREAKDDH*PVIY-----NCQYQATSFNQHEETN 295 DY D Y + KI ++R +N + + +D + N + N H + N Sbjct: 3952 DYINDKLLSYRNLINKININQRNDNFCKHSHEDEHNIYDKKKNGNNNHNNNDHNDHNDHN 4011
Query: 294 RINNKNY------KDL*DPSHQ-RRKKECSTRKCNKIYDNIDFKGSTYANSKPVENNQTK 136 N K Y K++ DPS+ E + + NKI DN+ G+TY N +N + K Sbjct: 4012 DHNKKKYDNNYDNKNIIDPSYNYNNNNENHSLQSNKISDNMKDPGNTYDN----KNRKYK 4067
Query: 135 SDR 127 DR Sbjct: 4068 DDR 4070
>tr|Q4YTK5|Q4YTK5_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei GN=PB001240.02.0 PE=4 SV=1 Length = 900
Score = 37.4 bits (85), Expect = 0.57 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%) Frame = -2
Query: 393 ANNTRREAKDDH*PVIYNCQYQATSFNQHEETN---RINNKNYKDL*DPSHQRRKKECST 223 AN A DD P+ Y + +N++ ETN +N N+ ++ Sbjct: 747 ANVPMYTANDDISPLT---GYPSNRYNKNNETNLKYELNRNNFTNI-------------N 790
Query: 222 RKCNKIYDNIDFKGSTYANSKPVENNQTKSDRFTTTPCK---ENLPVN 88 R N Y I + + Y SK ++NN + +TT K +N+P+N Sbjct: 791 RDSNNTYSQIHIQENNYNKSKLIDNNILNENNYTTLYAKNNLQNIPIN 838
>tr|Q23DR6|Q23DR6_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00046250 PE=4 SV=1 Length = 851
Score = 37.0 bits (84), Expect = 0.74 Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 4/175 (2%) Frame = -2
Query: 561 RTQSLDKAGQPNSYKKGGRRIDKTPKASKTSKNQSQ*LDYATDYIGMAAKITNSKRANNT 382 + QS ++A QP + KK R +K + + + + DY +K N Sbjct: 672 QNQSYNQANQPQNNKKDYERDNKQDQQKQEVQKKQPKRDYQKKVEEKRTIKDQTKDTQNN 731
Query: 381 RREAKDDH*PVIYNCQYQATSFNQHEETNRINNKNYKDL*DPSHQRRKKECSTRKCNK-- 208 + + K+ N + + T QH + NN + +PS Q ++ + K +K Sbjct: 732 KDQQKNTPHQGNENNKQKGTGKQQHNQNFNQNNPHENQPNNPSEQSKQNNNNIHKKSKNS 791
Query: 207 --IYDNIDFKGSTYANSKPVENNQTKSDRFTTTPCKENLPVNSSYHRKPQRQMPI 49 Y+ + +T A + NQ K+++ T +S+ +KP+ Q P+ Sbjct: 792 QVEYEKKHKEQNTQAPAGQQNQNQEKANQKKTN--------SSNQTQKPKPQRPV 838
>tr|Q86JH8|Q86JH8_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum PE=4 SV=1 Length = 1845
Score = 36.6 bits (83), Expect = 0.97 Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 6/156 (3%) Frame = -2
Query: 561 RTQSLDKAGQPNSYKKGGRRIDKTPKASKTSKNQSQ*LDYATDYIGMAAKITNSKRANNT 382 R Q DK P S K+ + TP S S + + L++++ ++ S ++NN+ Sbjct: 170 RNQEPDKNVLPTSRKRPPSVMPSTPNQSSNSSSLNSSLNFSSSN---SSPSPTSTQSNNS 226
Query: 381 RREAKDDH*PVIYNCQYQATSFNQHEETNRINNKNYKDL*DPSHQRRKKECSTRKCNKIY 202 R E + N QY+ + N + N NN N + ++ EC + Sbjct: 227 RFETRSQ------NDQYENNNNNNNNNNNNNNNNN-----NNNNNNNNIECIV--IDDDD 273
Query: 201 DNIDFKGS------TYANSKPVENNQTKSDRFTTTP 112 D+ D +G+ T S P+ + + + +++T P Sbjct: 274 DDDDDEGNSIKSTHTSTQSTPIRDRRQRDNKWTINP 309
>tr|Q55AX2|Q55AX2_DICDI SAM domain-containing protein OS=Dictyostelium discoideum GN=dotA PE=4 SV=2 Length = 1845
Score = 36.6 bits (83), Expect = 0.97 Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 6/156 (3%) Frame = -2
Query: 561 RTQSLDKAGQPNSYKKGGRRIDKTPKASKTSKNQSQ*LDYATDYIGMAAKITNSKRANNT 382 R Q DK P S K+ + TP S S + + L++++ ++ S ++NN+ Sbjct: 170 RNQEPDKNVLPTSRKRPPSVMPSTPNQSSNSSSLNSSLNFSSSN---SSPSPTSTQSNNS 226
Query: 381 RREAKDDH*PVIYNCQYQATSFNQHEETNRINNKNYKDL*DPSHQRRKKECSTRKCNKIY 202 R E + N QY+ + N + N NN N + ++ EC + Sbjct: 227 RFETRSQ------NDQYENNNNNNNNNNNNNNNNN-----NNNNNNNNIECIV--IDDDD 273
Query: 201 DNIDFKGS------TYANSKPVENNQTKSDRFTTTP 112 D+ D +G+ T S P+ + + + +++T P Sbjct: 274 DDDDDEGNSIKSTHTSTQSTPIRDRRQRDNKWTINP 309
>tr|B3L074|B3L074_PLAKH Exported serine/threonine protein kinase,putative OS=Plasmodium knowlesi (strain H) GN=PKH_030020 PE=4 SV=1 Length = 2737
Score = 36.6 bits (83), Expect = 0.97 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 3/147 (2%) Frame = -2
Query: 501 IDKTPKASKTSKNQSQ*LDYATDYIGMAAKITNSKRANNTRREAKDDH*PVIYNCQYQAT 322 ID P A KTS + L+ ++ Y A K ++ NN IY+ T Sbjct: 311 IDGNPFAIKTSTTDNNLLNMSSAYFNNAMKCSDYHNTNN-----------CIYHTGMLNT 359
Query: 321 SFNQHEETNRINNKNYKDL*DPSHQRRKKECSTRKCNKIYDNIDFKGSTYANSKPVENNQ 142 S ++ N K Y + P H+ + + N I++N++F S +NS V N Sbjct: 360 STSE-------NQKIYSNNSSP-HKNDYLKYNLYSVNSIHNNLNF--SNISNSNNVNYNV 409
Query: 141 TKSDRFTTTPCKENL---PVNSSYHRK 70 S+ TTP + + P+NS Y+ K Sbjct: 410 FNSN--VTTPASDAMNYNPINSLYNVK 434
>tr|B0W301|B0W301_CULQU Predicted protein OS=Culex quinquefasciatus GN=CpipJ_CPIJ001601 PE=4 SV=1 Length = 516
Score = 35.4 bits (80), Expect = 2.1 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -3
Query: 248 KGERKNVPPENATKYTTISTSKDPHTPI--QNQWKTIKQRAIDLQLLLAKKICQ 93 K ERKN+ A K I+ KDP + W+ I +R LQLL A+ +C+ Sbjct: 11 KSERKNLENSTAEKPKQIAMDKDPKLSLLPAKLWERIFRRLTPLQLLRARAVCR 64
>tr|Q8I3H0|Q8I3H0_PLAF7 Putative uncharacterized protein PFE1485w OS=Plasmodium falciparum (isolate 3D7) GN=PFE1485w PE=4 SV=1 Length = 1906
Score = 35.4 bits (80), Expect = 2.2 Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 11/146 (7%) Frame = -2
Query: 414 KITNSKRANNTRREAKDDH*PVIYNCQYQ----------ATSFNQHEETNRINNKNYKDL 265 +I N + N + + +YN Q + + N+++ N N NY D Sbjct: 1502 RIKNKQNENMNKNKMDMKKGRDVYNVQEEYDEDMIAGGGVVNVNENKNENNKKNDNYNDQ 1561
Query: 264 *DPSHQRRKKECSTRKCNKIYDNIDFKGSTYANSK-PVENNQTKSDRFTTTPCKENLPVN 88 + ++ +K + + N IY+ D K Y + K + NNQ D + +N N Sbjct: 1562 KNDNYNDQKNDIYNDQKNDIYN--DQKNDIYNDQKNDIYNNQ--KDNYVDNKVTDNNIRN 1617
Query: 87 SSYHRKPQRQMPISESLIPSSYTANS 10 SY K R+ + +SY ANS Sbjct: 1618 KSYDEK--RKKKNYNFISQTSYEANS 1641
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