BP913578
Clone id YMU001_000031_G10
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000031_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TCCACTGAATGAAGCATCAGAAGTGGATTGAAGACAATAACCTGGAAGCCCCCTCTGAAA
GAGAAGTATCCTCAAAAACACGCTCTGGGGTAACAACTGACTCAACCCACGTTGGAACAG
AGCAAACACTGTCACTGAAAGCTCTAGAGTAAAAGCTGAGAGCTTCCTCCAAGATAAGAA
GTCCCTCCTCTCGCTCACTACTCTGTAAAGAGAATGAGTACCACTAGAAAGAAATGTGAG
ACAACCTAGAGAAACTACTTCCTCTATAACTGAATAGCAAGACCTGAATCTCATGGAACT
CGAAACACCAAGAGAATCACACCATCAGTAAACTCGGACTTCTAAGAATAGGAAGACCTG
AGAGGTCATCACCTAAGGATCATGTTTGCCAAAGAAGTCGTCGGGGTCCAACAAGAACCT
AGCTACTCAAGCAAACTCCCTGAGATCAAACCAAATGTCCGTCACTCCTCTGTATCTGCC
AAGATCAACCTGTACGTACAATCCAATACAATATGTCAAACTGCATACAGACTCGAAAGA
GCACATATACTCCCGCTGTTGTAACTTGCTT
■■Homology search results ■■ -
sp_hit_id Q8IZM9
Definition sp|Q8IZM9|S38A6_HUMAN Probable sodium-coupled neutral amino acid transporter 6 OS=Homo sapiens
Align length 47
Score (bit) 32.7
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913578|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_G10.
(571 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8IZM9|S38A6_HUMAN Probable sodium-coupled neutral amino acid... 33 1.3
sp|Q6WWW3|S38A6_RAT Probable sodium-coupled neutral amino acid t... 32 1.7
sp|Q60308|Y3409_METJA Uncharacterized protein MJECS09 OS=Methano... 30 6.5
sp|A1AVC7|SAT_RUTMC Sulfate adenylyltransferase OS=Ruthia magnif... 30 8.5
sp|Q00961|NMDE3_RAT Glutamate [NMDA] receptor subunit epsilon-3 ... 30 8.5
sp|Q01098|NMDE3_MOUSE Glutamate [NMDA] receptor subunit epsilon-... 30 8.5

>sp|Q8IZM9|S38A6_HUMAN Probable sodium-coupled neutral amino acid
transporter 6 OS=Homo sapiens GN=SLC38A6 PE=2 SV=1
Length = 456

Score = 32.7 bits (73), Expect = 1.3
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = -2

Query: 285 RSCYSVIEEVVSLGCLTFLSSGTHSLYRVVSERRDFLSWRKLSAFTL 145
R+ + V+ S CL F+ G L+ + R DFLSW+KL AF L
Sbjct: 392 RNVFGVVGASTST-CLIFIFPG---LFYLKLSREDFLSWKKLGAFVL 434


>sp|Q6WWW3|S38A6_RAT Probable sodium-coupled neutral amino acid
transporter 6 OS=Rattus norvegicus GN=Slc38a6 PE=2 SV=1
Length = 457

Score = 32.3 bits (72), Expect = 1.7
Identities = 21/57 (36%), Positives = 30/57 (52%)
Frame = -2

Query: 285 RSCYSVIEEVVSLGCLTFLSSGTHSLYRVVSERRDFLSWRKLSAFTLELSVTVFALF 115
R+ + V+ S CL F+ G L+ + R DFLSW+KL A +L + TV F
Sbjct: 393 RNVFGVVGASTST-CLIFVFPG---LFYLKLSREDFLSWKKLGALSLLSTGTVVGSF 445


>sp|Q60308|Y3409_METJA Uncharacterized protein MJECS09
OS=Methanocaldococcus jannaschii GN=MJECS09 PE=4 SV=1
Length = 237

Score = 30.4 bits (67), Expect = 6.5
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = -2

Query: 315 SLGVSSSMRFRSCYSVIEEVVSLGCLTFLSSGTHSLYRVVSERRDFLSWRKLSAFTLELS 136
+L + M F SC S+++ + + TH LY++ + L + +++ S
Sbjct: 109 NLPLEDEMLFLSCGSLVK---------YQDASTHKLYKLEYLTKLILGYNRINVDNCICS 159

Query: 135 VTVFAL--FQRGLSQLLPQSVFLRILLFQR 52
+ VFA+ F+R L + F I+L +R
Sbjct: 160 IKVFAISTFERFLYHEFENNAFKLIMLHKR 189


>sp|A1AVC7|SAT_RUTMC Sulfate adenylyltransferase OS=Ruthia magnifica
subsp. Calyptogena magnifica GN=sat PE=3 SV=1
Length = 402

Score = 30.0 bits (66), Expect = 8.5
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1

Query: 361 RGHHLRIMFAKEVV-GVQQEPSYSS-KLPEIKPNVRHSSVSAKINLYVQSNTICQTAYRL 534
R H + A EV GV + K +I NVR ++S I Y NTI Q+ Y L
Sbjct: 202 RSHEYLVKIAVEVCDGVMIHSVLGNLKAGDIPANVRSEAISVLIENYFVDNTILQSGYPL 261

Query: 535 ERAHILP 555
+ + P
Sbjct: 262 DMRYAGP 268


>sp|Q00961|NMDE3_RAT Glutamate [NMDA] receptor subunit epsilon-3
OS=Rattus norvegicus GN=Grin2c PE=1 SV=1
Length = 1237

Score = 30.0 bits (66), Expect = 8.5
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = -2

Query: 312 LGVSSSMRFRSCYSVIEEV--VSLGCLTFLSSGTHSLY----RVVSERRDFLSWRKLSAF 151
LGVS + + + V+EE + +T L G H+L+ R V++ +LSWR L
Sbjct: 142 LGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPG-HALFLEGVRAVADA-SYLSWRLLDVL 199

Query: 150 TLEL 139
TLEL
Sbjct: 200 TLEL 203


>sp|Q01098|NMDE3_MOUSE Glutamate [NMDA] receptor subunit epsilon-3
OS=Mus musculus GN=Grin2c PE=2 SV=2
Length = 1239

Score = 30.0 bits (66), Expect = 8.5
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = -2

Query: 312 LGVSSSMRFRSCYSVIEEV--VSLGCLTFLSSGTHSLY----RVVSERRDFLSWRKLSAF 151
LGVS + + + V+EE + +T L G H+L+ R V++ +LSWR L
Sbjct: 142 LGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPG-HALFLEGVRAVADA-SYLSWRLLDVL 199

Query: 150 TLEL 139
TLEL
Sbjct: 200 TLEL 203


tr_hit_id Q9FXJ5
Definition tr|Q9FXJ5|Q9FXJ5_ARATH F5A9.24 OS=Arabidopsis thaliana
Align length 106
Score (bit) 34.7
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913578|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_G10.
(571 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9FXJ5|Q9FXJ5_ARATH F5A9.24 OS=Arabidopsis thaliana PE=4 SV=1 35 3.9

>tr|Q9FXJ5|Q9FXJ5_ARATH F5A9.24 OS=Arabidopsis thaliana PE=4 SV=1
Length = 1254

Score = 34.7 bits (78), Expect = 3.9
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 8/106 (7%)
Frame = -1

Query: 352 PILRSPSLLMV*FSWCFEF---HEIQVLLFSYRGSSFSRLSHISF*WYSFSLQSSERE-- 188
PI L+ W E H+I ++F+++ S W SF QS E E
Sbjct: 1126 PISSKADALLRCLLWAMESMASHKIDNIIFAFQDKSLIGAVLRPRAWPSFKAQSVELEFS 1185

Query: 187 ---EGLLILEEALSFYSRAFSDSVCSVPTWVESVVTPERVFEDTSL 59
G ++ ++++ SR+ S P W+ V ERVFE L
Sbjct: 1186 AANRGANLIAQSVTEASRSQSYVAVGHPYWMNGVFVEERVFEINGL 1231