BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913583|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_H03.
         (542 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ARX9|QUEC_DESPS Queuosine biosynthesis protein queC OS=Desu...    30   7.6  
sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog OS...    30   7.6  
sp|Q8WTW3|COG1_HUMAN Conserved oligomeric Golgi complex subunit ...    30   9.9  

>sp|Q6ARX9|QUEC_DESPS Queuosine biosynthesis protein queC
           OS=Desulfotalea psychrophila GN=queC PE=3 SV=1
          Length = 219

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +3

Query: 216 FNTILAERVRLPYLGAGAISFPTCRITHRD--SVARAAHQKFAYT*DCY 356
           FN   AE V L   G  AI FP   +T RD   + R     FA T  CY
Sbjct: 138 FNNAFAEAVNLGTDGQVAIRFPFSEMTKRDIGDLGRTLDLDFAKTWTCY 186


>sp|Q14692|BMS1_HUMAN Ribosome biogenesis protein BMS1 homolog
           OS=Homo sapiens GN=BMS1 PE=1 SV=1
          Length = 1282

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 518 ESKDGDEVFLDSLKEETGNEDGADDSECERTEHVGM 411
           ES D D+   D + E+ G E+G+ D E E  E+  M
Sbjct: 438 ESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEM 473


>sp|Q8WTW3|COG1_HUMAN Conserved oligomeric Golgi complex subunit 1
           OS=Homo sapiens GN=COG1 PE=1 SV=1
          Length = 980

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
 Frame = +1

Query: 202 PQGATSTPS*PKGLDYLTLERVQSLSLPAG*PTEILLQELPI----RNLPTH--EIATTL 363
           P+G    P+ P GL + TLE +     PAG  T +L +E+ +    ++LP    E   TL
Sbjct: 277 PEGLLPDPALPCGLLFSTLETITG-QHPAGKGTGVLQEEMKLCSWFKHLPASIVEFQPTL 335

Query: 364 TTPNNGLKNTFLKE 405
            T  + +   +LK+
Sbjct: 336 RTLAHPISQEYLKD 349

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913583|Adiantum capillus-veneris mRNA, clone:
YMU001_000031_H03.
         (542 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0MV34|A0MV34_ACRMI Ventral nervous system defective 2 OS=Acr...    36   1.1  
tr|Q22UD2|Q22UD2_TETTH Proprotein convertase like protein OS=Tet...    33   9.7  

>tr|A0MV34|A0MV34_ACRMI Ventral nervous system defective 2
           OS=Acropora millepora GN=vnd2 PE=2 SV=1
          Length = 207

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +2

Query: 113 QQKKF---PLRDENSLVLHFSLRRL*YTVWWYNHREQLQHHLSRKG*TTLPWSGCNLFPY 283
           QQ+++   P R+E + ++H +  ++   +W+ NHR + +  +S +G    P+S  +  P 
Sbjct: 106 QQQRYLSAPEREELARIVHLTPAQV--KIWFQNHRYKYRKQISERGPWDKPYSPLSQ-PA 162

Query: 284 LQDNPQRFCCKSCPSEICLHM 346
           L   P +FC  SC S  C ++
Sbjct: 163 LLSGPGQFC--SCVSPSCSYL 181


>tr|Q22UD2|Q22UD2_TETTH Proprotein convertase like protein
           OS=Tetrahymena thermophila SB210 GN=TTHERM_00259540 PE=4
           SV=2
          Length = 744

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 420 CGYGVFFKE---GVLEPVVWCCQCGSNLMCRQISDGQLLQQNLCGLSCR*G 277
           C  G +F E     ++ + +C QC +   C+Q  DG +L+  LC   C+ G
Sbjct: 40  CQSGNYFDEYQSKCVKCMDYCKQCHTKSQCKQCEDGYVLENGLCKSRCKTG 90