BP913591 |
Clone id |
YMU001_000031_H11 |
Library |
YMU01 |
Length |
476 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000031_H11. |
Accession |
BP913591 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTCTCCCTTCAAGGCCCTCCACACGTAATTGATTGTTGACAACACGAATGGTCCCTCCAA AATTTGATAGGGGACGAGGAAGAACAGGAGTAGAAATGGATACTCTATGAAAAGATGCTA CACCATCAACAGTTGGTTGATCAACTGTTCCTCTCACCTATAAGGTCAAGTCTGCATTGC CTTGCAGCCAATGCAGATGAGGTGAAAGTGCTGTGATCAGCATCATACCTCCATCTTTCA CAGTTGCATCCATTTGAACAGCTCCTTTATCTGAGAAATCCCAATCAAGCTCCTTCAAAG ACTCTGCCAGGTGAACTTCCCAGCCATCATCTCCTAATCTATCCCGAACAATCTTCTTCT CTTCAGTGTCATTTTCTTCAATTGCTTTACTCTTATTTCTGTTCCATCCTCGAGATCTTT TCAAATTCCTGACTTCCTCCTGTGCTTCATCATCCTGTGGTGCATCGAAATCAGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0A2Q4 |
Definition |
sp|P0A2Q4|METR_SALTY HTH-type transcriptional regulator metR OS=Salmonella typhimurium |
Align length |
57 |
Score (bit) |
35.0 |
E-value |
0.17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TMR9 |
Definition |
tr|A9TMR9|A9TMR9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
159 |
Score (bit) |
176.0 |
E-value |
4.0e-43 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913591|Adiantum capillus-veneris mRNA, clone: YMU001_000031_H11. (476 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TMR9|A9TMR9_PHYPA Predicted protein OS=Physcomitrella paten... 176 4e-43 tr|A7P5H4|A7P5H4_VITVI Chromosome chr4 scaffold_6, whole genome ... 155 9e-37 tr|Q9SL97|Q9SL97_ARATH Putative uncharacterized protein At2g2566... 143 4e-33 tr|Q5VRT8|Q5VRT8_ORYSJ cDNA clone:001-116-F07, full insert seque... 139 7e-32 tr|Q0JQ65|Q0JQ65_ORYSJ Os01g0179400 protein (Fragment) OS=Oryza ... 139 7e-32 tr|B8ADK1|B8ADK1_ORYSI Putative uncharacterized protein OS=Oryza... 139 7e-32 tr|A2ZPX9|A2ZPX9_ORYSJ Putative uncharacterized protein OS=Oryza... 139 7e-32 tr|B8HMG2|B8HMG2_9CHRO Putative uncharacterized protein OS=Cyano... 69 1e-10 tr|B0CC40|B0CC40_ACAM1 Putative uncharacterized protein OS=Acary... 65 1e-09 tr|A4RYX2|A4RYX2_OSTLU Predicted protein OS=Ostreococcus lucimar... 63 8e-09 tr|Q016Y8|Q016Y8_OSTTA Homology to unknown gene OS=Ostreococcus ... 62 1e-08 tr|Q8DGE2|Q8DGE2_THEEB Tll2375 protein OS=Thermosynechococcus el... 61 3e-08 tr|Q8YUC2|Q8YUC2_ANASP All2430 protein OS=Anabaena sp. (strain P... 60 5e-08 tr|B0C550|B0C550_ACAM1 Putative uncharacterized protein OS=Acary... 57 5e-07 tr|Q3M947|Q3M947_ANAVT Putative uncharacterized protein OS=Anaba... 57 6e-07 tr|Q3MGM0|Q3MGM0_ANAVT Putative uncharacterized protein OS=Anaba... 55 2e-06 tr|Q8YZJ8|Q8YZJ8_ANASP All0462 protein OS=Anabaena sp. (strain P... 54 3e-06 tr|Q5MZM5|Q5MZM5_SYNP6 Putative uncharacterized protein OS=Synec... 54 5e-06 tr|Q31MA1|Q31MA1_SYNE7 Putative uncharacterized protein OS=Synec... 54 5e-06 tr|Q2JHB3|Q2JHB3_SYNJB Conserved domain protein OS=Synechococcus... 53 7e-06 tr|Q119K9|Q119K9_TRIEI Putative uncharacterized protein OS=Trich... 53 9e-06 tr|B2IU20|B2IU20_NOSP7 Putative uncharacterized protein OS=Nosto... 52 1e-05 tr|Q2JVX4|Q2JVX4_SYNJA Putative uncharacterized protein OS=Synec... 51 3e-05 tr|B2IV47|B2IV47_NOSP7 Putative uncharacterized protein OS=Nosto... 51 3e-05 tr|A0ZDV0|A0ZDV0_NODSP Putative uncharacterized protein OS=Nodul... 50 6e-05 tr|B4WQS8|B4WQS8_9SYNE Putative uncharacterized protein OS=Synec... 47 4e-04 tr|Q7NP21|Q7NP21_GLOVI Glr0237 protein OS=Gloeobacter violaceus ... 40 0.058 tr|Q2UCQ9|Q2UCQ9_ASPOR DNA-directed RNA polymerase OS=Aspergillu... 40 0.058 tr|B8N4P4|B8N4P4_ASPFL DNA-directed RNA polymerase I subunit (Rp... 40 0.058 tr|B5WA37|B5WA37_SPIMA Putative uncharacterized protein (Fragmen... 39 0.099
>tr|A9TMR9|A9TMR9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_196483 PE=4 SV=1 Length = 2019
Score = 176 bits (447), Expect = 4e-43 Identities = 92/159 (57%), Positives = 114/159 (71%), Gaps = 2/159 (1%) Frame = -2
Query: 472 DFDAPQDDEAQEEVRNLKRSRGWNRNKSKAIEENDTEEKKIVRDRLG--DDGWEVHLAES 299 + D Q E ++ R R RGW R++ + +E++D V+DR G ++GWEV LAES Sbjct: 1454 ELDEEQGRERKKHRR--ARGRGWERSRERDVEDDDNVVSD-VQDRSGGGEEGWEVRLAES 1510
Query: 298 LKELDWDFSDKGAVQMDATVKDGGMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGV 119 LK LD DF D GAVQ+DA VKDGGMML+TA SP+L W+QG AD+T +RGTV QP DGV Sbjct: 1511 LKPLDKDFVDSGAVQIDAAVKDGGMMLLTAFSPNLQWIQGYADVTAQIRGTVQQPVADGV 1570
Query: 118 ASFHRVSISTPVLPRPLSNFGGTIRVVNNQLRVEGLEGR 2 A FH+VS+S+PVLPRP N GG+I V NNQL VEGLEGR Sbjct: 1571 AKFHKVSVSSPVLPRPFYNLGGSICVKNNQLCVEGLEGR 1609
>tr|A7P5H4|A7P5H4_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032534001 PE=4 SV=1 Length = 2137
Score = 155 bits (392), Expect = 9e-37 Identities = 74/136 (54%), Positives = 101/136 (74%) Frame = -2
Query: 409 GWNRNKSKAIEENDTEEKKIVRDRLGDDGWEVHLAESLKELDWDFSDKGAVQMDATVKDG 230 GW + + + +D EKKI RDR ++GW+ LAESLK L+W+ D G V++DA +KDG Sbjct: 1618 GWVKERGRG-PADDVSEKKISRDR-NEEGWDTQLAESLKGLNWNILDVGEVRIDADIKDG 1675
Query: 229 GMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVSISTPVLPRPLSNFGGT 50 GMM++TALSP+ WL GNAD+ L VRGTV+QP ++G ASFHR S+S+PVL +PL+NFGGT Sbjct: 1676 GMMMLTALSPYADWLHGNADIMLQVRGTVEQPVINGSASFHRASVSSPVLWKPLTNFGGT 1735
Query: 49 IRVVNNQLRVEGLEGR 2 + V +N+L + LE R Sbjct: 1736 VHVKSNRLCISSLESR 1751
>tr|Q9SL97|Q9SL97_ARATH Putative uncharacterized protein At2g25660 OS=Arabidopsis thaliana GN=At2g25660 PE=2 SV=1 Length = 2136
Score = 143 bits (361), Expect = 4e-33 Identities = 69/126 (54%), Positives = 94/126 (74%) Frame = -2
Query: 379 EENDTEEKKIVRDRLGDDGWEVHLAESLKELDWDFSDKGAVQMDATVKDGGMMLITALSP 200 +E + +EK+ RDR ++ W+ LAESLK L W+ D G V+++A +KDGGM L+TA+SP Sbjct: 1612 KEKEDDEKRTSRDR-SEERWDSQLAESLKGLYWNILDAGEVRLEADIKDGGMTLLTAISP 1670
Query: 199 HLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVSISTPVLPRPLSNFGGTIRVVNNQLRV 20 + +WLQGNAD+ L V GTVD P +DG ASFHR SIS+PVL +PL+NFGGT+ V +N+L + Sbjct: 1671 YANWLQGNADIRLQVGGTVDHPVLDGSASFHRASISSPVLRKPLTNFGGTLHVKSNRLCI 1730
Query: 19 EGLEGR 2 LE R Sbjct: 1731 TSLESR 1736
>tr|Q5VRT8|Q5VRT8_ORYSJ cDNA clone:001-116-F07, full insert sequence OS=Oryza sativa subsp. japonica GN=P0406H10.19 PE=2 SV=1 Length = 1022
Score = 139 bits (350), Expect = 7e-32 Identities = 69/152 (45%), Positives = 102/152 (67%) Frame = -2
Query: 457 QDDEAQEEVRNLKRSRGWNRNKSKAIEENDTEEKKIVRDRLGDDGWEVHLAESLKELDWD 278 +D E + + + R W +++ ND E +I+RD+ D+GWE LAESLK L W+ Sbjct: 473 EDLEGGDGKQGIIRIPVWAKDRGLT---NDISETRIMRDK-PDEGWEFQLAESLKGLSWN 528
Query: 277 FSDKGAVQMDATVKDGGMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVS 98 + G V+++A +KDGGM LITALSP+ +WLQG A++ L V+GTVD P VDG ASFHR + Sbjct: 529 MLEPGEVRINADIKDGGMTLITALSPYSNWLQGYAEVLLQVKGTVDHPVVDGSASFHRAT 588
Query: 97 ISTPVLPRPLSNFGGTIRVVNNQLRVEGLEGR 2 +++P L PL+NF G + V++N+L + +E R Sbjct: 589 VASPFLRTPLTNFAGNVHVISNRLCISSMESR 620
>tr|Q0JQ65|Q0JQ65_ORYSJ Os01g0179400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0179400 PE=4 SV=1 Length = 1029
Score = 139 bits (350), Expect = 7e-32 Identities = 69/152 (45%), Positives = 102/152 (67%) Frame = -2
Query: 457 QDDEAQEEVRNLKRSRGWNRNKSKAIEENDTEEKKIVRDRLGDDGWEVHLAESLKELDWD 278 +D E + + + R W +++ ND E +I+RD+ D+GWE LAESLK L W+ Sbjct: 480 EDLEGGDGKQGIIRIPVWAKDRGLT---NDISETRIMRDK-PDEGWEFQLAESLKGLSWN 535
Query: 277 FSDKGAVQMDATVKDGGMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVS 98 + G V+++A +KDGGM LITALSP+ +WLQG A++ L V+GTVD P VDG ASFHR + Sbjct: 536 MLEPGEVRINADIKDGGMTLITALSPYSNWLQGYAEVLLQVKGTVDHPVVDGSASFHRAT 595
Query: 97 ISTPVLPRPLSNFGGTIRVVNNQLRVEGLEGR 2 +++P L PL+NF G + V++N+L + +E R Sbjct: 596 VASPFLRTPLTNFAGNVHVISNRLCISSMESR 627
>tr|B8ADK1|B8ADK1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_00642 PE=4 SV=1 Length = 2080
Score = 139 bits (350), Expect = 7e-32 Identities = 69/152 (45%), Positives = 102/152 (67%) Frame = -2
Query: 457 QDDEAQEEVRNLKRSRGWNRNKSKAIEENDTEEKKIVRDRLGDDGWEVHLAESLKELDWD 278 +D E + + + R W +++ ND E +I+RD+ D+GWE LAESLK L W+ Sbjct: 1531 EDLEGGDGKQGIIRIPVWAKDRGLT---NDISETRIMRDK-PDEGWEFQLAESLKGLSWN 1586
Query: 277 FSDKGAVQMDATVKDGGMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVS 98 + G V+++A +KDGGM LITALSP+ +WLQG A++ L V+GTVD P VDG ASFHR + Sbjct: 1587 MLEPGEVRINADIKDGGMTLITALSPYSNWLQGYAEVLLQVKGTVDHPVVDGSASFHRAT 1646
Query: 97 ISTPVLPRPLSNFGGTIRVVNNQLRVEGLEGR 2 +++P L PL+NF G + V++N+L + +E R Sbjct: 1647 VASPFLRTPLTNFAGNVHVISNRLCISSMESR 1678
>tr|A2ZPX9|A2ZPX9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_000601 PE=4 SV=1 Length = 1990
Score = 139 bits (350), Expect = 7e-32 Identities = 69/152 (45%), Positives = 102/152 (67%) Frame = -2
Query: 457 QDDEAQEEVRNLKRSRGWNRNKSKAIEENDTEEKKIVRDRLGDDGWEVHLAESLKELDWD 278 +D E + + + R W +++ ND E +I+RD+ D+GWE LAESLK L W+ Sbjct: 1441 EDLEGGDGKQGIIRIPVWAKDRGLT---NDISETRIMRDK-PDEGWEFQLAESLKGLSWN 1496
Query: 277 FSDKGAVQMDATVKDGGMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVS 98 + G V+++A +KDGGM LITALSP+ +WLQG A++ L V+GTVD P VDG ASFHR + Sbjct: 1497 MLEPGEVRINADIKDGGMTLITALSPYSNWLQGYAEVLLQVKGTVDHPVVDGSASFHRAT 1556
Query: 97 ISTPVLPRPLSNFGGTIRVVNNQLRVEGLEGR 2 +++P L PL+NF G + V++N+L + +E R Sbjct: 1557 VASPFLRTPLTNFAGNVHVISNRLCISSMESR 1588
>tr|B8HMG2|B8HMG2_9CHRO Putative uncharacterized protein OS=Cyanothece sp. PCC 7425 GN=Cyan7425_4866 PE=4 SV=1 Length = 1601
Score = 68.9 bits (167), Expect = 1e-10 Identities = 32/86 (37%), Positives = 55/86 (63%) Frame = -2
Query: 259 VQMDATVKDGGMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVSISTPVL 80 +++D VK+GG+ L+ + + WL G+ + L VRG++ QP V+G+ S ++VS+ L Sbjct: 1131 LKLDLQVKNGGLSLLNLFTDQVTWLAGSGSVDLKVRGSLKQPQVEGLVSLNQVSLKPQAL 1190
Query: 79 PRPLSNFGGTIRVVNNQLRVEGLEGR 2 PL++ GT+R +QL V+ L+GR Sbjct: 1191 TAPLTDLTGTLRFDRDQLFVDNLQGR 1216
>tr|B0CC40|B0CC40_ACAM1 Putative uncharacterized protein OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_0530 PE=4 SV=1 Length = 1728
Score = 65.5 bits (158), Expect = 1e-09 Identities = 31/89 (34%), Positives = 53/89 (59%) Frame = -2
Query: 271 DKGAVQMDATVKDGGMMLITALSPHLHWLQGNADLTL*VRGTVDQPTVDGVASFHRVSIS 92 D A+ + VKD G+ LI + L+W++G ++ L V GT+ QP++ G ++ +++ Sbjct: 1269 DSDALDVSLKVKDDGLSLINLFTDQLNWVEGQGEIDLNVTGTLTQPSMQGSIQLNQATLT 1328
Query: 91 TPVLPRPLSNFGGTIRVVNNQLRVEGLEG 5 + +L PL+N GTI+ NQLR+ L G Sbjct: 1329 SDLLFEPLTNVTGTIQFDRNQLRINRLIG 1357
>tr|A4RYX2|A4RYX2_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_40935 PE=4 SV=1 Length = 926
Score = 62.8 bits (151), Expect = 8e-09 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%) Frame = -2
Query: 262 AVQMDATVKDGGMMLITALSPHL-HWLQGNADLTL*VRGTVDQPTVDGVASFHRVSISTP 86 ++ +D V++ GM L+TA P + W G+AD++L VRGT P DGV + I +P Sbjct: 436 SLAVDWRVREHGMTLLTAFVPEVAEWQSGSADMSLHVRGTPAAPVYDGVMEIRKARILSP 495
Query: 85 VLPRPLSNFGGTIRVVNNQLRVEGLEGR 2 +L RP+ T+R+ N L V+ +E + Sbjct: 496 LLARPIYPANATLRIQRNTLYVDDIEAK 523
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