BP913594 |
Clone id |
YMU001_000032_A03 |
Library |
YMU01 |
Length |
576 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_A03. |
Accession |
BP913594 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL310Contig1 |
Sequence |
GAGATATTACCTGCAGGTACTCTTGTGTCATGAAAGGTAAAACTCTTAGAGGGACACAGA ACTTGAGAGAATTGGCATATTGAGATGACCGAAAAAGCAGATAGAAACAATCTGACCCCT TATACCTTCACAAGAGTCTAACACGGAGTAAAATTTTTAGATCAAGGCTAAGGCAAAAGA AAAATGCCTCATCTGTGTCTCAACTAAAATCTCTCCAGCTTGGAAAAACTCTAGGCTACA AGTCAAAATACACTAAGCTGCCGGGACAGCAATCCGTCCTGCTACTTGATCTAGATCCCG TTGTCCATTTGAAGTTATCTTTCTGCCTCCTTTAGGATCTTTCTCAACAATGTCGATTTT CTCAAGTTGCTTTAGAACATCACGAGCAATGGAGCCACTGCTTTTTCCAAAATGTGAAGG GCGACTGCCATTACTTTTCCTTCCTCCGTATATTTTCCGGAAAGCACCCACACCAACTCC TCCACGAAGATAGATCTTCCTAGCCATTGAAGCTGCTCTGATATAGTACCAATCTGGGTC ATAGGGGGCAAGCTCCTTAAAAGTCGCAGTCTTCAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SGA6 |
Definition |
sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1 OS=Arabidopsis thaliana |
Align length |
104 |
Score (bit) |
171.0 |
E-value |
2.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S7Q3 |
Definition |
tr|A9S7Q3|A9S7Q3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
107 |
Score (bit) |
192.0 |
E-value |
1.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913594|Adiantum capillus-veneris mRNA, clone: YMU001_000032_A03. (576 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S7Q3|A9S7Q3_PHYPA Predicted protein OS=Physcomitrella paten... 192 1e-47 tr|A9RXE2|A9RXE2_PHYPA Predicted protein OS=Physcomitrella paten... 191 2e-47 tr|A9RQ90|A9RQ90_PHYPA Predicted protein OS=Physcomitrella paten... 189 7e-47 tr|A9SNK0|A9SNK0_PHYPA Predicted protein OS=Physcomitrella paten... 186 6e-46 tr|A9SJ99|A9SJ99_PHYPA Predicted protein OS=Physcomitrella paten... 186 8e-46 tr|A9NKW9|A9NKW9_PICSI Putative uncharacterized protein OS=Picea... 181 3e-44 tr|A5C4J2|A5C4J2_VITVI Putative uncharacterized protein (Chromos... 179 1e-43 tr|A5BGC5|A5BGC5_VITVI Putative uncharacterized protein (Chromos... 177 3e-43 tr|A9NL45|A9NL45_PICSI Putative uncharacterized protein OS=Picea... 177 4e-43 tr|A9PGL4|A9PGL4_POPTR Putative uncharacterized protein OS=Popul... 174 3e-42 tr|Q2VCJ6|Q2VCJ6_SOLTU 40S ribosomal protein S19-like OS=Solanum... 170 6e-41 tr|Q0WSH0|Q0WSH0_ARATH 40S ribosomal protein S19-like OS=Arabido... 170 6e-41 tr|Q9ZRW2|Q9ZRW2_CICAR 40S ribosomal protein S19 (Fragment) OS=C... 169 8e-41 tr|Q67ZX8|Q67ZX8_ARATH 40S ribosomal protein S19-like OS=Arabido... 168 2e-40 tr|B4FP25|B4FP25_MAIZE 40S ribosomal protein S19 OS=Zea mays PE=... 168 2e-40 tr|B7FHE5|B7FHE5_MEDTR Putative uncharacterized protein OS=Medic... 167 3e-40 tr|B3TLL5|B3TLL5_ELAGV 40S ribosomal protein S19 OS=Elaeis guine... 167 4e-40 tr|B4FD90|B4FD90_MAIZE 40S ribosomal protein S19 OS=Zea mays PE=... 164 2e-39 tr|Q5KQL3|Q5KQL3_ORYSJ Putative ribosomal protein S19 OS=Oryza s... 163 6e-39 tr|Q10JD4|Q10JD4_ORYSJ Os03g0424500 protein OS=Oryza sativa subs... 163 6e-39 tr|A2XI59|A2XI59_ORYSI Putative uncharacterized protein OS=Oryza... 163 6e-39 tr|B6T3G4|B6T3G4_MAIZE 40S ribosomal protein S19 OS=Zea mays PE=... 163 7e-39 tr|Q10JD1|Q10JD1_ORYSJ Retrotransposon protein, putative, Ty1-co... 162 2e-38 tr|A6MZL9|A6MZL9_ORYSI 40S ribosomal protein S19 OS=Oryza sativa... 161 3e-38 tr|Q5KQL4|Q5KQL4_ORYSJ Putative ribosomal protein S19 OS=Oryza s... 154 3e-36 tr|A7SN77|A7SN77_NEMVE Predicted protein OS=Nematostella vectens... 149 1e-34 tr|A4S4Y3|A4S4Y3_OSTLU Ribosomal protein S19, component of cytos... 147 4e-34 tr|B0Z9Q8|B0Z9Q8_9BILA Ribosomal protein rps19 OS=Lineus viridis... 142 1e-32 tr|A8UFX1|A8UFX1_9ANNE Ribosomal protein rps19 OS=Eurythoe compl... 141 2e-32 tr|A8I403|A8I403_CHLRE Ribosomal protein S19 OS=Chlamydomonas re... 140 4e-32
>tr|A9S7Q3|A9S7Q3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163322 PE=4 SV=1 Length = 144
Score = 192 bits (487), Expect = 1e-47 Identities = 96/107 (89%), Positives = 99/107 (92%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYD DWYYIRAASMARKIYLR GVGVGAFRKIYGGRKSNG RPSHF KSS Sbjct: 38 VKTATFKELAPYDADWYYIRAASMARKIYLRQGVGVGAFRKIYGGRKSNGVRPSHFAKSS 97
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAVPAA 256 GSIAR LKQLE +DIVEKDP+GGR+ITSNGQRDLDQVAGRIAV AA Sbjct: 98 GSIARHCLKQLEALDIVEKDPQGGRRITSNGQRDLDQVAGRIAVAAA 144
>tr|A9RXE2|A9RXE2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_206524 PE=4 SV=1 Length = 142
Score = 191 bits (486), Expect = 2e-47 Identities = 93/107 (86%), Positives = 101/107 (94%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYD DWYY+RAASMARKIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSS Sbjct: 36 VKTATFKELAPYDADWYYVRAASMARKIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSS 95
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAVPAA 256 GSIAR LKQLE+++IVEKDPKGGR+ITS+GQRDLDQVAGRIAV AA Sbjct: 96 GSIARHCLKQLEQLNIVEKDPKGGRRITSDGQRDLDQVAGRIAVTAA 142
>tr|A9RQ90|A9RQ90_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204626 PE=4 SV=1 Length = 142
Score = 189 bits (481), Expect = 7e-47 Identities = 93/107 (86%), Positives = 100/107 (93%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPY+ DWYYIRAASMARKIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSS Sbjct: 36 VKTATFKELAPYESDWYYIRAASMARKIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSS 95
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAVPAA 256 GSIAR LKQLE ++IVEKDPKGGR+ITS+GQRDLDQVAGRIAV AA Sbjct: 96 GSIARHCLKQLEALNIVEKDPKGGRRITSDGQRDLDQVAGRIAVAAA 142
>tr|A9SNK0|A9SNK0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_186874 PE=4 SV=1 Length = 142
Score = 186 bits (473), Expect = 6e-46 Identities = 91/107 (85%), Positives = 98/107 (91%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYD DW+YIR ASMARKIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSS Sbjct: 36 VKTATFKELAPYDADWFYIRTASMARKIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSS 95
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAVPAA 256 GSIAR LKQLE ++IVEKDPKGGR+ITS+GQRDLDQVAGRIAV A Sbjct: 96 GSIARHCLKQLEALNIVEKDPKGGRRITSDGQRDLDQVAGRIAVATA 142
>tr|A9SJ99|A9SJ99_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109981 PE=4 SV=1 Length = 142
Score = 186 bits (472), Expect = 8e-46 Identities = 91/107 (85%), Positives = 99/107 (92%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYD DWYYIRAASMARKIYLRGG+GVGAF+KIYGGRKSNG RPSHF KSS Sbjct: 36 VKTATFKELAPYDADWYYIRAASMARKIYLRGGIGVGAFKKIYGGRKSNGVRPSHFAKSS 95
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAVPAA 256 GSIAR LKQLE ++IVEKD +GGR+ITS+GQRDLDQVAGRIA+ AA Sbjct: 96 GSIARHCLKQLEALNIVEKDVRGGRRITSDGQRDLDQVAGRIAIAAA 142
>tr|A9NKW9|A9NKW9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 144
Score = 181 bits (458), Expect = 3e-44 Identities = 88/106 (83%), Positives = 97/106 (91%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYDPDWYY+RAASMARKIYLR G+GVGAF KIYGGR+ NG+RP HF KSS Sbjct: 38 VKTATFKELAPYDPDWYYVRAASMARKIYLRKGIGVGAFSKIYGGRQRNGARPPHFCKSS 97
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAVPA 259 GSIAR VL+QLEK++IVE DP GGR+ITS+GQRDLDQVAGRIAV A Sbjct: 98 GSIARHVLQQLEKMNIVEMDPNGGRRITSSGQRDLDQVAGRIAVAA 143
>tr|A5C4J2|A5C4J2_VITVI Putative uncharacterized protein (Chromosome chr17 scaffold_12, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00016251001 PE=4 SV=1 Length = 143
Score = 179 bits (453), Expect = 1e-43 Identities = 86/104 (82%), Positives = 96/104 (92%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYDPDWYYIRAASMARKIYLRGG+GVGAFR+IYGG K NGSRP HF KSS Sbjct: 38 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGIGVGAFRRIYGGSKRNGSRPPHFCKSS 97
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAV 265 GSIAR +L+QL+ ++I+E D KGGR+ITS+GQRDLDQVAGRIAV Sbjct: 98 GSIARHILQQLQTMNIIELDSKGGRRITSSGQRDLDQVAGRIAV 141
>tr|A5BGC5|A5BGC5_VITVI Putative uncharacterized protein (Chromosome chr1 scaffold_5, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00030059001 PE=4 SV=1 Length = 146
Score = 177 bits (450), Expect = 3e-43 Identities = 84/104 (80%), Positives = 95/104 (91%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYDPDWYY+RAASMARKIYLR G+GVG FR+IYGG K NGSRP HF KSS Sbjct: 41 VKTATFKELAPYDPDWYYVRAASMARKIYLRQGLGVGGFRRIYGGSKRNGSRPPHFCKSS 100
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAV 265 GSIAR +L+QLEK++I+E DP+GGR+ITS+GQRDLDQVAGRI V Sbjct: 101 GSIARHILQQLEKMNIIENDPRGGRRITSSGQRDLDQVAGRIVV 144
>tr|A9NL45|A9NL45_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 144
Score = 177 bits (449), Expect = 4e-43 Identities = 83/106 (78%), Positives = 96/106 (90%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKTATFKELAPYDPDWYY+RAASMARKIYLR G+GVGAFRKIYGG + NG+RP HF KSS Sbjct: 38 VKTATFKELAPYDPDWYYVRAASMARKIYLRHGIGVGAFRKIYGGSQRNGARPPHFCKSS 97
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAVPA 259 GS+AR +L+QLEK++I+E DP GGR+ITS+GQRDLDQVAGR+ V A Sbjct: 98 GSVARHILQQLEKMNIIEMDPNGGRRITSSGQRDLDQVAGRVVVVA 143
>tr|A9PGL4|A9PGL4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 143
Score = 174 bits (441), Expect = 3e-42 Identities = 81/104 (77%), Positives = 94/104 (90%) Frame = -1
Query: 576 VKTATFKELAPYDPDWYYIRAASMARKIYLRGGVGVGAFRKIYGGRKSNGSRPSHFGKSS 397 VKT FKELAPYDPDWYY+RAASMARKIY+RGG+GVGAFR+IYGG K NGSRP HF KSS Sbjct: 38 VKTGKFKELAPYDPDWYYVRAASMARKIYIRGGLGVGAFRRIYGGSKRNGSRPPHFCKSS 97
Query: 396 GSIARDVLKQLEKIDIVEKDPKGGRKITSNGQRDLDQVAGRIAV 265 GSIAR +L+QL+ ++I++ DPKGGR+ITS+GQRDLDQVAGRI V Sbjct: 98 GSIARHILQQLQNVNIIDIDPKGGRRITSSGQRDLDQVAGRIVV 141
|