| BP913596 |
| Clone id |
YMU001_000032_A05 |
| Library |
YMU01 |
| Length |
539 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_A05. |
| Accession |
BP913596 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1124Contig1 |
| Sequence |
GAGATATTACCTGCAGGTACTCGAAGAATTCGCGGCCGCAGGAATTGATTTGGTATTTTT
TCAAAACTCACAAATTGTGAGTAATATATTAGAAAACAAACTATTTACAAAGAAGACCCT
GCTCATATCAAGCAAGAGAGTCAGATTAACAAACTACAACCCATCATACTCAACAAACAT
CAAAAGATAACCCACTGAGCAAGAAAGACCAGAGGTTGCCACTAATTCAACATGGCTTGT
CACCCCATGCAGAAAACACCCTCAAGCTACCATCACTAAGAGCCATTGTCAAAATGTTAT
AATGGCTAACAGGGGAGCCACCCTGGACAGATAAAATCCTAGAGAAGAACAAAAGGCCAA
GGAGGAGAAATAAAATCCGAACATGTGGGGCCCATCATCCTATCACCAGCAGAAGCTCCT
GAAGGTGCGACCAGGACGCAGCCGTTACCACCAGCAAGATGCCTGCCTCAGAGAGCCTCC
ACAAAAAGCCACAAAACCCAGATTCACCAAGGCGAGCATGAGCGGACTAGAATCTGAGC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q6ZU64 |
| Definition |
sp|Q6ZU64|CC108_HUMAN Coiled-coil domain-containing protein 108 OS=Homo sapiens |
| Align length |
28 |
| Score (bit) |
33.1 |
| E-value |
0.71 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q2QV86 |
| Definition |
tr|Q2QV86|Q2QV86_ORYSJ Os12g0239200 protein OS=Oryza sativa subsp. japonica |
| Align length |
129 |
| Score (bit) |
35.8 |
| E-value |
1.1 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913596|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_A05.
(493 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q2QV86|Q2QV86_ORYSJ Os12g0239200 protein OS=Oryza sativa subs... 36 1.1
tr|A2ZJC1|A2ZJC1_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.1
tr|B3MM99|B3MM99_DROAN GF14339 OS=Drosophila ananassae GN=GF1433... 35 1.9
tr|A1A5F7|A1A5F7_XENTR Zswim5 protein OS=Xenopus tropicalis GN=z... 34 4.2
tr|B3MS41|B3MS41_DROAN GF20874 OS=Drosophila ananassae GN=GF2087... 34 4.3
tr|Q7RE12|Q7RE12_PLAYO Putative uncharacterized protein PY05257 ... 33 5.6
tr|Q2CHZ3|Q2CHZ3_9RHOB Potassium uptake transporter, transmembra... 33 7.1
tr|A3K9I8|A3K9I8_9RHOB ABC transporter, membrane spanning protei... 33 7.1
tr|B5VWW1|B5VWW1_SPIMA Peptidase M23 OS=Arthrospira maxima CS-32... 33 9.5
tr|Q4XY09|Q4XY09_PLACH Putative uncharacterized protein (Fragmen... 33 9.5
>tr|Q2QV86|Q2QV86_ORYSJ Os12g0239200 protein OS=Oryza sativa subsp.
japonica GN=Os12g0239200 PE=4 SV=1
Length = 1184
Score = 35.8 bits (81), Expect = 1.1
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +1
Query: 16 QNSQIVSNILENKLFTKKTLLISSKRVRLTNYNPSYSTNIKR*PTEQERPEVATNSTWLV 195
Q+ + S+ ENK TL +S V ++ + TNIK P + E PE S +
Sbjct: 1000 QSEAVQSSNEENKSNGCCTLAVSEDDVLVSGTD----TNIKELPNDAESPEAVEGSRKEI 1055
Query: 196 TPCRKHPQATITKSHCQNVI--MANRGATLDR*NPREEQKAKEEK*NPNMWGPSSYHQQK 369
C +AT T C +++ +A + AT+ + +E A+ + + + G S +
Sbjct: 1056 QRCFTLEEATDTILLCSSIVHDLAYKAATIALDHEQERVHAEPTRPSVTIVGKSIPKEDG 1115
Query: 370 LLKVRPGRS 396
LLK+ R+
Sbjct: 1116 LLKLTHRRT 1124
>tr|A2ZJC1|A2ZJC1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_37921 PE=4 SV=1
Length = 1040
Score = 35.8 bits (81), Expect = 1.1
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +1
Query: 16 QNSQIVSNILENKLFTKKTLLISSKRVRLTNYNPSYSTNIKR*PTEQERPEVATNSTWLV 195
Q+ + S+ ENK TL +S V ++ + TNIK P + E PE S +
Sbjct: 856 QSEAVQSSNEENKSNGCCTLAVSEDDVLVSGTD----TNIKELPNDAESPEAVEGSRKEI 911
Query: 196 TPCRKHPQATITKSHCQNVI--MANRGATLDR*NPREEQKAKEEK*NPNMWGPSSYHQQK 369
C +AT T C +++ +A + AT+ + +E A+ + + + G S +
Sbjct: 912 QRCFTLEEATDTILLCSSIVHDLAYKAATIALDHEQERVHAEPTRPSVTIVGKSIPKEDG 971
Query: 370 LLKVRPGRS 396
LLK+ R+
Sbjct: 972 LLKLTHRRT 980
>tr|B3MM99|B3MM99_DROAN GF14339 OS=Drosophila ananassae GN=GF14339
PE=4 SV=1
Length = 1335
Score = 35.0 bits (79), Expect = 1.9
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +3
Query: 303 TKGQGGEIKSEHVGPIILSPAEAPEGATRTQPLPPARCLPQRASTKSHKTQIHQGEHERT 482
+ G GG + S P P AP G + +Q P L +S+ SHK Q Q + ER
Sbjct: 1111 SSGGGGSVFS----PSGAGPTGAPAGISNSQSRPSVGALSNSSSSSSHKQQQKQAKEERE 1166
Query: 483 R 485
R
Sbjct: 1167 R 1167
>tr|A1A5F7|A1A5F7_XENTR Zswim5 protein OS=Xenopus tropicalis
GN=zswim5 PE=2 SV=1
Length = 1158
Score = 33.9 bits (76), Expect = 4.2
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 375 EGATRTQPLPPARCLPQRASTKSHKTQIHQG 467
EGA + PLPPA+ L RA+ SH Q H+G
Sbjct: 5 EGAPPSLPLPPAKRLCSRANPPSHAAQQHRG 35
>tr|B3MS41|B3MS41_DROAN GF20874 OS=Drosophila ananassae GN=GF20874
PE=4 SV=1
Length = 1186
Score = 33.9 bits (76), Expect = 4.3
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 16/152 (10%)
Frame = +1
Query: 46 ENKLFTKKTLLISSKRVRLTNYNP-SYSTNIKR*PTEQERPEVATNSTWLVTPCRKHP-Q 219
+ K T T L ++ L + N +Y+T T AT + TP + P
Sbjct: 656 QKKHHTVATTLATTTTTTLPHNNKQTYNTVATTATTPATATATATATVTATTPTWRLPAD 715
Query: 220 ATITKSHCQNVIMANRGAT-----LDR*NPREEQKAKEEK*NPNMWGPSS---------Y 357
+ T C + AN G T L R +Q+ ++++ P P + Y
Sbjct: 716 NSQTYDSCDSSTNANLGLTTPSPSLQRKQLTPDQQQQQQQQQPLRLQPGNQSPILLQRFY 775
Query: 358 HQQKLLKVRPGRSRYHQQDACLREPPQKATKP 453
HQQ L+ + RY QQ ++PP +T P
Sbjct: 776 HQQNQLREKEAAERYQQQ---RQQPPLTSTNP 804
>tr|Q7RE12|Q7RE12_PLAYO Putative uncharacterized protein PY05257
OS=Plasmodium yoelii yoelii GN=PY05257 PE=4 SV=1
Length = 530
Score = 33.5 bits (75), Expect = 5.6
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +1
Query: 1 DLVFFQNSQIVSNILENKLFTKKTLLISS--KRVRLTNYN 114
+++ F+N+Q+++NIL+N K +L++ + K + +TNYN
Sbjct: 437 NVILFKNTQVLANILKNVYNNKYSLILKNGKKSLNITNYN 476
>tr|Q2CHZ3|Q2CHZ3_9RHOB Potassium uptake transporter, transmembrane
subunit, TrkH OS=Oceanicola granulosus HTCC2516
GN=OG2516_01904 PE=4 SV=1
Length = 506
Score = 33.1 bits (74), Expect = 7.1
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -3
Query: 287 YLSRVAPLLAIITF*QWLLVMVA*GCFLHGVTSHVELVATSGLSCSVG 144
Y +R+AP+ +T WL ++++ HG + ++ATSG+S S G
Sbjct: 193 YFTRLAPIYTSLTLALWLGLILSGQSPFHGFVHALSVMATSGISASGG 240
>tr|A3K9I8|A3K9I8_9RHOB ABC transporter, membrane spanning protein
(Ribose) OS=Sagittula stellata E-37 GN=SSE37_05737 PE=4
SV=1
Length = 335
Score = 33.1 bits (74), Expect = 7.1
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = -3
Query: 350 DGPHMFGF--YFSSLAFCSSLGFYLSRVAPLLAIITF*QWLLVMVA*GCFLHGVTSHVEL 177
DG + GF +FS LAF GF + VA +L + + L + G L+ + + E+
Sbjct: 162 DGQQIVGFPAWFSMLAFIRHWGFLTTTVAVMLIVFALGWFFLRYTSAGRSLYAIGGNPEV 221
Query: 176 VATSGLSCS---VGYLLMFVEYDGL*FVNLTLLLD 81
+G++ S VG ++ GL V L + LD
Sbjct: 222 ARLAGINVSLMTVGVYVVSSLLAGLGGVVLAMRLD 256
>tr|B5VWW1|B5VWW1_SPIMA Peptidase M23 OS=Arthrospira maxima CS-328
GN=AmaxDRAFT_1003 PE=4 SV=1
Length = 725
Score = 32.7 bits (73), Expect = 9.5
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = -1
Query: 400 NGCVLVAPSGASAGDRMMGPTCSDFISPPWPFVLL*DFICPG 275
N V AP GASA D + PT +SP P +L D PG
Sbjct: 554 NSLVATAPLGASAYDPLQNPTLGRIVSPDLPPLLGPDAYLPG 595
>tr|Q4XY09|Q4XY09_PLACH Putative uncharacterized protein (Fragment)
OS=Plasmodium chabaudi GN=PC000862.02.0 PE=3 SV=1
Length = 598
Score = 32.7 bits (73), Expect = 9.5
Identities = 13/40 (32%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Frame = +1
Query: 1 DLVFFQNSQIVSNILENKLFTKKTLLISS--KRVRLTNYN 114
+++ F+N+Q+++NIL+N K +L++ + K + +TNY+
Sbjct: 504 NIILFKNTQVLANILKNVYNNKYSLILKNGKKSINITNYD 543
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