BP913598
Clone id YMU001_000032_A08
Library
Length 641
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGATATTACCTGCAGGTACTCAGCTAGATGAACTTTGGATTGAAAACAAAACCCTCACC
TATTAAAACCTTTCATTGTCCTCTCTAAGAACCAAAAACATGTAATATCTCAACGTCGCA
ACTTTTCGACTGAAATGGAGCATCCAAGTTAAATAAACCTGCAATTGACGCTCCACTACG
CATGACGCGGCCCACTCCTTATTTGCGAGACCTGCGGGCAAGACGACGGAGCTTCCTGTG
CTTGTGCTTGTTCATCTTCTTCTTCCTCTTGCGCTTCACANCTGTACCGCTTGAAATACT
GAAATCTTTTGACCCATGAAAGCCAGGCACCCCAATCACAGCATCAAATGCAGACAACAA
AATTGCACCATGTGAAAATGGATTCATAATGTCAGCTGAATCTCCTGCACTCAATACAAG
ATGTTCCCGCTCTTGCCCTAAAGCTCTTCCTTGCAACCGAGAGTTCCTCAGACCAGAAGC
CTGAAAGTAGTAATCCGAAAACCCCGAGTCTAGCCTTCCAAGATCCTTCTTTATAAATTG
AAGAAACTCCTTCGCATCTTTGAGGAGAGCCTCATCCTGTCGTGCCTCCTTCTGCGAAGT
TAGTACCCCTAGAGATAATGCAGGCCATATCCGCTCATTCT
■■Homology search results ■■ -
sp_hit_id Q49X74
Definition sp|Q49X74|CNPD_STAS1 2',3'-cyclic-nucleotide 2'-phosphodiesterase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
Align length 93
Score (bit) 35.0
E-value 0.33
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913598|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_A08.
(641 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q49X74|CNPD_STAS1 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 35 0.33
sp|P67279|CNPD_STAAW 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|A8Z1V7|CNPD_STAAT 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|Q6G9S7|CNPD_STAAS 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|Q6GHE9|CNPD_STAAR 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|P67278|CNPD_STAAN 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|P67277|CNPD_STAAM 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|A6QGI5|CNPD_STAAE 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|Q5HGE5|CNPD_STAAC 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|Q2YXN1|CNPD_STAAB 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|A5ISH0|CNPD_STAA9 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|Q2FZ08|CNPD_STAA8 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|Q2FHF2|CNPD_STAA3 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|A6U1A5|CNPD_STAA2 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|A7X1S5|CNPD_STAA1 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 32 2.1
sp|Q4L5Y9|CNPD_STAHJ 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 4.8
sp|Q8CSS7|CNPD_STAES 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 4.8
sp|Q5HPQ5|CNPD_STAEQ 2',3'-cyclic-nucleotide 2'-phosphodiesteras... 31 4.8

>sp|Q49X74|CNPD_STAS1 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=SSP1479 PE=3 SV=1
Length = 519

Score = 35.0 bits (79), Expect = 0.33
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ +L +KE EA+ K+AKE L + L + S+ L N ++GR +G+
Sbjct: 170 IAILVKEKEREAKEAVDKNAKELLATTVQRLAAEHT--SESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|P67279|CNPD_STAAW 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain MW2) GN=cvfA PE=3 SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|A8Z1V7|CNPD_STAAT 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain USA300 / TCH1516)
GN=cvfA PE=3 SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|Q6G9S7|CNPD_STAAS 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain MSSA476) GN=cvfA PE=3
SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|Q6GHE9|CNPD_STAAR 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain MRSA252) GN=cvfA PE=3
SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|P67278|CNPD_STAAN 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain N315) GN=cvfA PE=1 SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|P67277|CNPD_STAAM 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=cvfA PE=3 SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|A6QGI5|CNPD_STAAE 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain Newman) GN=cvfA PE=3
SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|Q5HGE5|CNPD_STAAC 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain COL) GN=cvfA PE=3 SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


>sp|Q2YXN1|CNPD_STAAB 2',3'-cyclic-nucleotide 2'-phosphodiesterase
OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=cvfA PE=3 SV=1
Length = 519

Score = 32.3 bits (72), Expect = 2.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = -3

Query: 612 LGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRLQGRALGQ 433
+ VL +KE E + K AKE L + L S+ L N ++GR +G+
Sbjct: 170 IAVLVKEKEKEAKEKVDKTAKELLATAVQRLAA--DHTSESTVSVVNLPNDEMKGRIIGR 227

Query: 432 EREHL-VLSAGDSADIMNPFSHGAILLSAFDAV 337
E ++ L D++ + A++LS FD +
Sbjct: 228 EGRNIRTLETLTGIDLIIDDTPEAVILSGFDPI 260


tr_hit_id Q7M8Z7
Definition tr|Q7M8Z7|Q7M8Z7_WOLSU CLPY PROTEIN OS=Wolinella succinogenes
Align length 80
Score (bit) 34.7
E-value 5.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913598|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_A08.
(641 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7M8Z7|Q7M8Z7_WOLSU CLPY PROTEIN OS=Wolinella succinogenes GN... 35 5.1
tr|Q0BBB7|Q0BBB7_BURCM Molybdopterin dehydrogenase, FAD-binding ... 35 5.1
tr|Q19N21|Q19N21_CAMCO Mobilization protein OS=Campylobacter col... 35 5.1
tr|Q19N18|Q19N18_CAMJE Mobilization protein OS=Campylobacter jej... 35 5.1
tr|B1YNT9|B1YNT9_BURA4 Molybdopterin dehydrogenase FAD-binding O... 34 6.6
tr|Q7PQL7|Q7PQL7_ANOGA AGAP004265-PA (Fragment) OS=Anopheles gam... 27 6.8
tr|B1J972|B1J972_PSEPW Molybdopterin dehydrogenase FAD-binding O... 34 8.7

>tr|Q7M8Z7|Q7M8Z7_WOLSU CLPY PROTEIN OS=Wolinella succinogenes
GN=hslU PE=4 SV=1
Length = 440

Score = 34.7 bits (78), Expect = 5.1
Identities = 26/80 (32%), Positives = 40/80 (50%)
Frame = -3

Query: 633 RIWPALSLGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNSRL 454
RI +L+ L SQKE + E +K+AKE L+ I+ LD +A GLR +
Sbjct: 191 RIQESLAKAFLNSQKEEMKKEVTVKEAKELLK-IEASEALLDM----ETIKAEGLRRAEE 245

Query: 453 QGRALGQEREHLVLSAGDSA 394
+G E + + +S G S+
Sbjct: 246 EGIIFIDEMDKIAVSQGSSS 265


>tr|Q0BBB7|Q0BBB7_BURCM Molybdopterin dehydrogenase, FAD-binding
OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=Bamb_3000 PE=4 SV=1
Length = 333

Score = 34.7 bits (78), Expect = 5.1
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3

Query: 492 YYFQASGLRNSRLQGRAL----GQEREHLVLSAGDSADIMNPFSHGAILLSAFDAVIGVP 325
+Y A N R G G R H +L A +NP S ++ L+A DAV+ V
Sbjct: 122 FYDPAFAQCNKRAPGSGCAAIGGHNRMHAILGASPQCVAVNP-SDMSVALAALDAVVQVS 180

Query: 324 GFHGSKDFSISS 289
G HG++ +S
Sbjct: 181 GPHGARQIPFAS 192


>tr|Q19N21|Q19N21_CAMCO Mobilization protein OS=Campylobacter coli
RM2228 GN=mob PE=4 SV=1
Length = 502

Score = 34.7 bits (78), Expect = 5.1
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = -3

Query: 639 NERIWPALSLGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNS 460
NE+ L L ++KE+R E +D K L+ K++L + +YY + N
Sbjct: 230 NEQFRSFEKLRDLRTEKESRAREYQQRDIKSELERTKRELDKFIQSKDEYYRETIRKFNE 289

Query: 459 RLQGRALGQEREHLVLSAGDSAD 391
RLQG+ R++ + D+A+
Sbjct: 290 RLQGKTRKFNRKNGEIQLQDTAN 312


>tr|Q19N18|Q19N18_CAMJE Mobilization protein OS=Campylobacter jejuni
GN=mob PE=4 SV=1
Length = 502

Score = 34.7 bits (78), Expect = 5.1
Identities = 23/83 (27%), Positives = 40/83 (48%)
Frame = -3

Query: 639 NERIWPALSLGVLTSQKEARQDEALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLRNS 460
NE+ L L ++KE+R E +D K L+ K++L + +YY + N
Sbjct: 230 NEQFRSFEKLRDLRTEKESRAREYQQRDIKSELERTKRELDKFIQSKDEYYRETIRKFNE 289

Query: 459 RLQGRALGQEREHLVLSAGDSAD 391
RLQG+ R++ + D+A+
Sbjct: 290 RLQGKTRKFNRKNGEIQLQDTAN 312


>tr|B1YNT9|B1YNT9_BURA4 Molybdopterin dehydrogenase FAD-binding
OS=Burkholderia ambifaria (strain MC40-6)
GN=BamMC406_2863 PE=4 SV=1
Length = 333

Score = 34.3 bits (77), Expect = 6.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -3

Query: 492 YYFQASGLRNSRLQGRAL----GQEREHLVLSAGDSADIMNPFSHGAILLSAFDAVIGVP 325
+Y A N R G G R H +L A +NP S ++ L+A DA++ V
Sbjct: 122 FYDPAFAQCNKRAPGSGCAAIGGHNRMHAILGASPQCVAVNP-SDMSVALAALDAIVQVS 180

Query: 324 GFHGSKDFSISS 289
G HG++ +S
Sbjct: 181 GPHGARQIPFAS 192


>tr|Q7PQL7|Q7PQL7_ANOGA AGAP004265-PA (Fragment) OS=Anopheles
gambiae GN=AGAP004265 PE=4 SV=4
Length = 1039

Score = 27.3 bits (59), Expect(2) = 6.8
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2

Query: 320 KPGTPITASNADNKIAPCENGFIMSA--ESPALNTRCSRS 433
KP +P SNA + + NG +S +SP NTR SRS
Sbjct: 675 KPSSPTPPSNAAPRGSSHGNGAFVSKSQKSPKTNTRSSRS 714



Score = 24.6 bits (52), Expect(2) = 6.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3

Query: 456 TESSSDQKPESSNPKTPSLAFQDP 527
T SS +PE S +TPSL+ + P
Sbjct: 709 TRSSRSNQPEVSRDRTPSLSPERP 732


>tr|B1J972|B1J972_PSEPW Molybdopterin dehydrogenase FAD-binding
OS=Pseudomonas putida (strain W619) GN=PputW619_2855
PE=4 SV=1
Length = 333

Score = 33.9 bits (76), Expect = 8.7
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Frame = -3

Query: 573 EALLKDAKEFLQFIKKDLGRLDSGFSDYYFQASGLR-NSRLQGRAL----GQEREHLVLS 409
+A+L A L+ + G L YYF +G N R G G R H +L
Sbjct: 91 QAILAGASPQLRNMATTGGNLLQRTRCYYFYDTGTPCNKREPGSGCPARSGLNRSHAILG 150

Query: 408 AGDSADIMNPFSHGAILLSAFDAVIGVPGFHGSK 307
A D+ +P S + L+A DAV+ V G GS+
Sbjct: 151 ASDACVATHP-SDMCVALAALDAVVHVQGRAGSR 183