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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913607
Clone id YMU001_000032_B07
Library
Length 628
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCATTTTTAAAAAAACTGCTATTTTTGGTGTGCTTATGTATGTTGAAAGTGTTCTATTGT
GATTGCCTATGATTTTTTGAGATTTCTAGAAATTTTTAGGATCTTTTTGAAAATGTTTTG
GATTTTCCGGTGATTTTAGTGTTTTCAACTACTTTTCGGCTTAACTTTGGTATTTTTGAG
CAATCGAAAAATTTGCTTCGACGTCACTGGCAAAATTTTATGAGCCTTGGGTGTGCGATT
CGGCAAGATGTTAGCATTTGCGACAAGCGGGAGTGAAATTTTGGGCTTCGGACGGGAAAA
CGAACTTTGACAGTTAGTTTAGGTGAAAACCACCTCCTATGATTATTAAGGTTCAAATTA
TTCAATAATAAAAAAACCCCCCTCCCCAGCCATCTTAGGCGCGCCTAAGATGCTCTCTCT
CCTCCCTTTGGCATTTCCTCTCTTCCTCACCTCACTCTCTCTCTTTCCTATTGGTTTGCA
AACGTTGAAGATAACTCACTCTTTCTCTCTCCTCCTTGGTAGTCAACGCTGAAGAAAACC
AGTTACCTCACTCTTTCTTTCTCTCTTTTTGCCCATTGGTGGACAAAGGGCTTCTCTCTC
TCTCTCATCCTCGACTTGACAGCGCATG
■■Homology search results ■■ -
sp_hit_id P34641
Definition sp|P34641|CED11_CAEEL Protein ced-11 OS=Caenorhabditis elegans
Align length 43
Score (bit) 34.3
E-value 0.54
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913607|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_B07.
         (628 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34641|CED11_CAEEL Protein ced-11 OS=Caenorhabditis elegans G...    34   0.54 
sp|Q5ZJ65|FA76A_CHICK Protein FAM76A OS=Gallus gallus GN=FAM76A ...    31   5.9  
sp|Q96JM3|ZN828_HUMAN Zinc finger protein 828 OS=Homo sapiens GN...    31   6.0  

>sp|P34641|CED11_CAEEL Protein ced-11 OS=Caenorhabditis elegans
           GN=ced-11 PE=2 SV=1
          Length = 1418

 Score = 34.3 bits (77), Expect = 0.54
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 130 PENPKHFQKDPKNF*KSQKIIGNHNRTLSTYISTPKIAVFLKM 2
           P N +   KDP+ F K  +I   H  TLST+ STP +  +L +
Sbjct: 717 PLNIEEIDKDPRPFGKKNRIRRAHAPTLSTFYSTPIVKYWLSL 759


>sp|Q5ZJ65|FA76A_CHICK Protein FAM76A OS=Gallus gallus GN=FAM76A
           PE=2 SV=1
          Length = 307

 Score = 30.8 bits (68), Expect = 5.9
 Identities = 21/59 (35%), Positives = 30/59 (50%)
 Frame = -3

Query: 302 RFPVRSPKFHSRLSQMLTSCRIAHPRLIKFCQ*RRSKFFDCSKIPKLSRKVVENTKITG 126
           RFP  +    S+  Q+   CRIAHP  I  C   R++F   SK   + +K  +N K+ G
Sbjct: 13  RFPFEAL---SQGQQLCKECRIAHP--IVKCTYCRTEFQQESKTNTICKKCAQNVKLYG 66


>sp|Q96JM3|ZN828_HUMAN Zinc finger protein 828 OS=Homo sapiens
           GN=ZNF828 PE=1 SV=2
          Length = 812

 Score = 30.8 bits (68), Expect = 6.0
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -2

Query: 306 SSFSRPKPKISLPLVANANILPNRTPKAHKILPVTSKQIFRLLKNTKVKPKS 151
           +S S P+P  S+P+  +  + P  +P+  K  PV+ + +   L N K + +S
Sbjct: 180 ASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQS 231
tr_hit_id A6SNK7
Definition tr|A6SNK7|A6SNK7_BOTFB Predicted protein OS=Botryotinia fuckeliana (strain B05.10)
Align length 36
Score (bit) 35.0
E-value 3.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913607|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_B07.
         (628 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6SNK7|A6SNK7_BOTFB Predicted protein OS=Botryotinia fuckelia...    35   3.7  
tr|Q95QC7|Q95QC7_CAEEL Putative TRP homologous cation channel pr...    34   6.3  
tr|B4NPI8|B4NPI8_DROWI GK17986 OS=Drosophila willistoni GN=GK179...    34   6.3  

>tr|A6SNK7|A6SNK7_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_14587 PE=4 SV=1
          Length = 648

 Score = 35.0 bits (79), Expect = 3.7
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -1

Query: 592 SPLSTNGQKERKKE*GNWFSSALTTKEERERVSYLQ 485
           SPLS  G+ E +   GNW  + L   EERE  +Y +
Sbjct: 352 SPLSARGRPESRSRGGNWHGNELLVSEEREGTAYTE 387


>tr|Q95QC7|Q95QC7_CAEEL Putative TRP homologous cation channel
           protein (Fragment) OS=Caenorhabditis elegans
           GN=ltrpc4/ced-11 PE=2 SV=1
          Length = 1027

 Score = 34.3 bits (77), Expect = 6.3
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 130 PENPKHFQKDPKNF*KSQKIIGNHNRTLSTYISTPKIAVFLKM 2
           P N +   KDP+ F K  +I   H  TLST+ STP +  +L +
Sbjct: 326 PLNIEEIDKDPRPFGKKNRIRRAHAPTLSTFYSTPIVKYWLSL 368


>tr|B4NPI8|B4NPI8_DROWI GK17986 OS=Drosophila willistoni GN=GK17986
           PE=4 SV=1
          Length = 907

 Score = 34.3 bits (77), Expect = 6.3
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +1

Query: 76  FEISRNF*DLFENVLDFPVILVFSTTFRLNFGIFEQSKNLLRRHWQNFMSLGCAIRQDVS 255
           +E+ R+F ++ E+  DF    +   T R   G+  + +++LRRH   F +  CAI   + 
Sbjct: 512 YEVERHFAEIIEDQFDFHTYCMRKMTLRAYVGLL-RLEDVLRRHPFYFKAAKCAIEVYIR 570

Query: 256 ICDK 267
           + DK
Sbjct: 571 LYDK 574