BP913609
Clone id YMU001_000032_B09
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTTGTCTTCTTCGTCGCTGCAGTCTTGAATGCCAAAGCACACGTTTGAAATTCAATGAGC
CTGTAAGCAATTCCAATATAAGCTGCAAAATACTGCAAGACCTATGCTTCAAGCAATAAC
TTTGTAGCTAGTTGGGTAAGCCACAACAACAATGCTCCATCTAATCCTTTGGAGACACCT
TCCTGAAAGAATCTCCCAAAAAGAAGGTATCCCAAAATCTCTAGTTGTACGTGAAAAGTG
TATCCATAATCCTCCTCTGTCATCCTAAGATGATTACAAGCCATCAAAACTTTGACTTCA
TACTTTGGTGTCAACCACAATGATGATAATAGTCACTTGAACCCCACACAACTGCAAGGT
GCCTATCCATGCAACAAGAGCTTAACGAAGTCTTAAGACGTTTCCCTTCAAGTGAGAGGC
TATCTTTCTTACTTTAAAAGCTTCTATGAAGCTGCCTCCTGAGAAACTGAAAACTGCTCG
CTACTGCTGCTCCCTTTCGTGCTGCCCTTGCTGAGTACCTGCAGGTAATATCT
■■Homology search results ■■ -
sp_hit_id A7J1T0
Definition sp|A7J1T0|M313B_XENLA Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis
Align length 42
Score (bit) 31.6
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913609|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_B09.
(533 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A7J1T0|M313B_XENLA Mitogen-activated protein kinase kinase ki... 32 2.5
sp|Q7VPM2|OXAA_HAEDU Inner membrane protein oxaA OS=Haemophilus ... 30 5.6

>sp|A7J1T0|M313B_XENLA Mitogen-activated protein kinase kinase
kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1
Length = 961

Score = 31.6 bits (70), Expect = 2.5
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -3

Query: 243 IHFSRTTRDFGIPSFWEILSGRCLQRIRWSIVVVAYPTSYKV 118
IHFSR+ G F E L G CL+ + W+I+ AY T YK+
Sbjct: 119 IHFSRSRSGSGNGGFLEGLFG-CLRPV-WNIIGKAYSTDYKL 158


>sp|Q7VPM2|OXAA_HAEDU Inner membrane protein oxaA OS=Haemophilus
ducreyi GN=oxaA PE=3 SV=1
Length = 536

Score = 30.4 bits (67), Expect = 5.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1

Query: 332 LLSSLWLTPKYEVKVLMACNHLRMTEEDYGYTFHVQLEILGYLLF 198
+ S LW PK + ++ A HL +T DYG+ + + + L+F
Sbjct: 294 ITSQLWTGPKDQKEMAQAATHLELT-VDYGWAWFIAKPLFWLLIF 337


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913609|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_B09.
(533 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******